RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 KIAA0586Q9BVV6 1533 aa14.39□□□□□ -0.11
RACK1-216ENST00000507273 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
RACK1-216ENST00000507273 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
RACK1-216ENST00000507273 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
RACK1-216ENST00000507273 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
RACK1-216ENST00000507273 ADCY10Q96PN6 1610 aa14.26□□□□□ -0.13
RACK1-216ENST00000507273 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
RACK1-216ENST00000507273 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
RACK1-216ENST00000507273 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
RACK1-216ENST00000507273 DISP1Q96F81 1524 aa14.24□□□□□ -0.13
RACK1-216ENST00000507273 UGGT2Q9NYU1 1516 aa14.24□□□□□ -0.13
RACK1-216ENST00000507273 KIF13AQ9H1H9 1805 aa14.22□□□□□ -0.13
RACK1-216ENST00000507273 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
RACK1-216ENST00000507273 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
RACK1-216ENST00000507273 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
RACK1-216ENST00000507273 PTPRGP23470 1445 aa14.17□□□□□ -0.14
RACK1-216ENST00000507273 MAPKBP1O60336 1514 aa14.17□□□□□ -0.14
RACK1-216ENST00000507273 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
RACK1-216ENST00000507273 EEA1Q15075 1411 aa14.14□□□□□ -0.15
RACK1-216ENST00000507273 UHRF1BP1LA0JNW5 1464 aa14.12□□□□□ -0.15
RACK1-216ENST00000507273 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
RACK1-216ENST00000507273 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
RACK1-216ENST00000507273 ABCC10Q5T3U5 1492 aa14.11□□□□□ -0.15
RACK1-216ENST00000507273 ABCC2Q92887 1545 aa14.1□□□□□ -0.15
RACK1-216ENST00000507273 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
RACK1-216ENST00000507273 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
RACK1-216ENST00000507273 KIF21BO75037 1637 aa14.08□□□□□ -0.16
RACK1-216ENST00000507273 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
RACK1-216ENST00000507273 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
RACK1-216ENST00000507273 GOLGA3Q08378 1498 aa14.06□□□□□ -0.16
RACK1-216ENST00000507273 KDM5BQ9UGL1 1544 aa14.06□□□□□ -0.16
RACK1-216ENST00000507273 ABCA8O94911 1581 aa14.05□□□□□ -0.16
RACK1-216ENST00000507273 ZCCHC11Q5TAX3 1644 aaKnown RBP14.05□□□□□ -0.16
RACK1-216ENST00000507273 PLB1Q6P1J6 1458 aa14.05□□□□□ -0.16
RACK1-216ENST00000507273 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
RACK1-216ENST00000507273 FAM69CQ0P6D2 419 aa14.03□□□□□ -0.16
RACK1-216ENST00000507273 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
RACK1-216ENST00000507273 TSPOAP1O95153 1857 aa14.01□□□□□ -0.17
RACK1-216ENST00000507273 PPRC1Q5VV67 1664 aaKnown RBP14□□□□□ -0.17
RACK1-216ENST00000507273 GLI2P10070 1586 aa14□□□□□ -0.17
RACK1-216ENST00000507273 EPRSP07814 1512 aaKnown RBP13.96□□□□□ -0.17
RACK1-216ENST00000507273 P3H3Q8IVL6 736 aa13.96□□□□□ -0.17
RACK1-216ENST00000507273 MAP3K4Q9Y6R4 1608 aa13.95□□□□□ -0.18
RACK1-216ENST00000507273 WDR7Q9Y4E6 1490 aa13.93□□□□□ -0.18
RACK1-216ENST00000507273 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
RACK1-216ENST00000507273 FHOD3Q2V2M9 1422 aa13.92□□□□□ -0.18
RACK1-216ENST00000507273 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
RACK1-216ENST00000507273 ATP10BO94823 1461 aa13.91□□□□□ -0.18
RACK1-216ENST00000507273 KDM6BO15054 1643 aa13.9□□□□□ -0.19
RACK1-216ENST00000507273 NUP153P49790 1475 aaKnown RBP13.88□□□□□ -0.19
RACK1-216ENST00000507273 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
RACK1-216ENST00000507273 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
RACK1-216ENST00000507273 CFAP43Q8NDM7 1665 aa13.87□□□□□ -0.19
RACK1-216ENST00000507273 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
RACK1-216ENST00000507273 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
RACK1-216ENST00000507273 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
RACK1-216ENST00000507273 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
RACK1-216ENST00000507273 COL17A1Q9UMD9 1497 aaPredicted RBP13.84□□□□□ -0.19
RACK1-216ENST00000507273 MAGI3Q5TCQ9 1506 aa13.81□□□□□ -0.2
RACK1-216ENST00000507273 ABCA9Q8IUA7 1624 aa13.81□□□□□ -0.2
RACK1-216ENST00000507273 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
RACK1-216ENST00000507273 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
RACK1-216ENST00000507273 CD109Q6YHK3 1445 aa13.8□□□□□ -0.2
RACK1-216ENST00000507273 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
RACK1-216ENST00000507273 CDK13Q14004 1512 aaKnown RBP13.77□□□□□ -0.21
RACK1-216ENST00000507273 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
RACK1-216ENST00000507273 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
RACK1-216ENST00000507273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.72□□□□□ -0.21
RACK1-216ENST00000507273 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
RACK1-216ENST00000507273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
RACK1-216ENST00000507273 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
RACK1-216ENST00000507273 ARAP3Q8WWN8 1544 aa13.7□□□□□ -0.22
RACK1-216ENST00000507273 PCF11O94913 1555 aaKnown RBP13.7□□□□□ -0.22
RACK1-216ENST00000507273 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
RACK1-216ENST00000507273 NEO1Q92859 1461 aa13.67□□□□□ -0.22
RACK1-216ENST00000507273 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
RACK1-216ENST00000507273 CLIP1P30622 1438 aa13.66□□□□□ -0.22
RACK1-216ENST00000507273 CASKIN1Q8WXD9 1431 aa13.66□□□□□ -0.22
RACK1-216ENST00000507273 KIF14Q15058 1648 aa13.66□□□□□ -0.22
RACK1-216ENST00000507273 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
RACK1-216ENST00000507273 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
RACK1-216ENST00000507273 RICTORQ6R327 1708 aa13.63□□□□□ -0.23
RACK1-216ENST00000507273 ATP1B4Q9UN42 357 aaPredicted RBP13.62□□□□□ -0.23
RACK1-216ENST00000507273 TROQ12816 1431 aaPredicted RBP13.62□□□□□ -0.23
RACK1-216ENST00000507273 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
RACK1-216ENST00000507273 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
RACK1-216ENST00000507273 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
RACK1-216ENST00000507273 FANCAO15360 1455 aa13.61□□□□□ -0.23
RACK1-216ENST00000507273 ADGRL1O94910 1474 aa13.6□□□□□ -0.23
RACK1-216ENST00000507273 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
RACK1-216ENST00000507273 PLCH2O75038 1416 aa13.59□□□□□ -0.23
RACK1-216ENST00000507273 AKNAQ7Z591 1439 aa13.59□□□□□ -0.23
RACK1-216ENST00000507273 RAPGEF3O95398 923 aa13.59□□□□□ -0.23
RACK1-216ENST00000507273 CDC42BPBQ9Y5S2 1711 aa13.58□□□□□ -0.24
RACK1-216ENST00000507273 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
RACK1-216ENST00000507273 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
RACK1-216ENST00000507273 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
RACK1-216ENST00000507273 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
RACK1-216ENST00000507273 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
RACK1-216ENST00000507273 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms