RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
CLDND1-211ENST00000506575 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
CLDND1-211ENST00000506575 KIAA0586Q9BVV6 1533 aa26.44■■□□□ 1.82
CLDND1-211ENST00000506575 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
CLDND1-211ENST00000506575 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
CLDND1-211ENST00000506575 IQGAP2Q13576 1575 aa26.29■■□□□ 1.8
CLDND1-211ENST00000506575 CARMIL2Q6F5E8 1435 aa26.21■■□□□ 1.79
CLDND1-211ENST00000506575 PRXQ9BXM0 1461 aa26.17■■□□□ 1.78
CLDND1-211ENST00000506575 CTTNBP2Q8WZ74 1663 aa26.16■■□□□ 1.78
CLDND1-211ENST00000506575 PTPRGP23470 1445 aa26.12■■□□□ 1.77
CLDND1-211ENST00000506575 TTBK1Q5TCY1 1321 aaPredicted RBP26.12■■□□□ 1.77
CLDND1-211ENST00000506575 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
CLDND1-211ENST00000506575 NPM1P06748 294 aaKnown RBP eCLIP26.11■■□□□ 1.77
CLDND1-211ENST00000506575 CSRNP3Q8WYN3 585 aa26.11■■□□□ 1.77
CLDND1-211ENST00000506575 EEA1Q15075 1411 aa26.11■■□□□ 1.77
CLDND1-211ENST00000506575 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
CLDND1-211ENST00000506575 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
CLDND1-211ENST00000506575 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
CLDND1-211ENST00000506575 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
CLDND1-211ENST00000506575 KIAA0556O60303 1618 aa26.03■■□□□ 1.76
CLDND1-211ENST00000506575 FAM9AQ8IZU1 332 aaPredicted RBP26■■□□□ 1.75
CLDND1-211ENST00000506575 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
CLDND1-211ENST00000506575 MAPKBP1O60336 1514 aa25.98■■□□□ 1.75
CLDND1-211ENST00000506575 KIF13AQ9H1H9 1805 aa25.94■■□□□ 1.74
CLDND1-211ENST00000506575 UACAQ9BZF9 1416 aa25.94■■□□□ 1.74
CLDND1-211ENST00000506575 ABCC2Q92887 1545 aa25.92■■□□□ 1.74
CLDND1-211ENST00000506575 UHRF1BP1LA0JNW5 1464 aa25.91■■□□□ 1.74
CLDND1-211ENST00000506575 ABCC10Q5T3U5 1492 aa25.88■■□□□ 1.73
CLDND1-211ENST00000506575 KIF21BO75037 1637 aa25.86■■□□□ 1.73
CLDND1-211ENST00000506575 FAM69CQ0P6D2 419 aa25.86■■□□□ 1.73
CLDND1-211ENST00000506575 DIP2BQ9P265 1576 aa25.84■■□□□ 1.73
CLDND1-211ENST00000506575 KDM5BQ9UGL1 1544 aa25.78■■□□□ 1.72
CLDND1-211ENST00000506575 ASXL2Q76L83 1435 aa25.78■■□□□ 1.72
CLDND1-211ENST00000506575 PLB1Q6P1J6 1458 aa25.78■■□□□ 1.72
CLDND1-211ENST00000506575 P3H3Q8IVL6 736 aa25.77■■□□□ 1.72
CLDND1-211ENST00000506575 SAMD9Q5K651 1589 aa25.77■■□□□ 1.72
CLDND1-211ENST00000506575 ZCCHC11Q5TAX3 1644 aaKnown RBP25.77■■□□□ 1.72
CLDND1-211ENST00000506575 ABCA8O94911 1581 aa25.74■■□□□ 1.71
CLDND1-211ENST00000506575 RANGAP1P46060 587 aaPredicted RBP25.74■■□□□ 1.71
CLDND1-211ENST00000506575 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.7
CLDND1-211ENST00000506575 TSPOAP1O95153 1857 aa25.69■■□□□ 1.7
CLDND1-211ENST00000506575 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
CLDND1-211ENST00000506575 GLI2P10070 1586 aa25.65■■□□□ 1.7
CLDND1-211ENST00000506575 EFCAB5A4FU69 1503 aa25.63■■□□□ 1.69
CLDND1-211ENST00000506575 EPRSP07814 1512 aaKnown RBP25.62■■□□□ 1.69
CLDND1-211ENST00000506575 WDR7Q9Y4E6 1490 aa25.61■■□□□ 1.69
CLDND1-211ENST00000506575 FHOD3Q2V2M9 1422 aa25.61■■□□□ 1.69
CLDND1-211ENST00000506575 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
CLDND1-211ENST00000506575 ARID3CA6NKF2 412 aa25.56■■□□□ 1.68
CLDND1-211ENST00000506575 MAP3K4Q9Y6R4 1608 aa25.53■■□□□ 1.68
CLDND1-211ENST00000506575 KDM6BO15054 1643 aa25.52■■□□□ 1.68
CLDND1-211ENST00000506575 ATP10BO94823 1461 aa25.52■■□□□ 1.68
CLDND1-211ENST00000506575 PPRC1Q5VV67 1664 aaKnown RBP25.52■■□□□ 1.68
CLDND1-211ENST00000506575 KCNH8Q96L42 1107 aa25.51■■□□□ 1.67
CLDND1-211ENST00000506575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
CLDND1-211ENST00000506575 HNRNPUL2Q1KMD3 747 aaKnown RBP25.48■■□□□ 1.67
CLDND1-211ENST00000506575 NUP153P49790 1475 aaKnown RBP25.46■■□□□ 1.67
CLDND1-211ENST00000506575 TEX14Q8IWB6 1497 aa25.46■■□□□ 1.67
CLDND1-211ENST00000506575 CFAP43Q8NDM7 1665 aa25.45■■□□□ 1.66
CLDND1-211ENST00000506575 ARHGAP35Q9NRY4 1499 aa25.42■■□□□ 1.66
CLDND1-211ENST00000506575 CD109Q6YHK3 1445 aa25.41■■□□□ 1.66
CLDND1-211ENST00000506575 FMN1Q68DA7 1419 aa25.39■■□□□ 1.66
CLDND1-211ENST00000506575 MAGI3Q5TCQ9 1506 aa25.35■■□□□ 1.65
CLDND1-211ENST00000506575 PLEKHD1A6NEE1 506 aa25.33■■□□□ 1.65
CLDND1-211ENST00000506575 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
CLDND1-211ENST00000506575 HECW1Q76N89 1606 aa25.32■■□□□ 1.64
CLDND1-211ENST00000506575 ABCA9Q8IUA7 1624 aa25.32■■□□□ 1.64
CLDND1-211ENST00000506575 CDK13Q14004 1512 aaKnown RBP25.27■■□□□ 1.64
CLDND1-211ENST00000506575 COL17A1Q9UMD9 1497 aaPredicted RBP25.26■■□□□ 1.63
CLDND1-211ENST00000506575 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
CLDND1-211ENST00000506575 CLIP1P30622 1438 aa25.22■■□□□ 1.63
CLDND1-211ENST00000506575 CDK11AQ9UQ88 783 aaPredicted RBP25.19■■□□□ 1.62
CLDND1-211ENST00000506575 PHLDB1Q86UU1 1377 aa25.17■■□□□ 1.62
CLDND1-211ENST00000506575 PCF11O94913 1555 aaKnown RBP25.15■■□□□ 1.62
CLDND1-211ENST00000506575 CASKIN1Q8WXD9 1431 aa25.15■■□□□ 1.62
CLDND1-211ENST00000506575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.15■■□□□ 1.62
CLDND1-211ENST00000506575 ARAP3Q8WWN8 1544 aa25.14■■□□□ 1.62
CLDND1-211ENST00000506575 LRRIQ1Q96JM4 1722 aa25.14■■□□□ 1.61
CLDND1-211ENST00000506575 NEO1Q92859 1461 aa25.14■■□□□ 1.61
CLDND1-211ENST00000506575 TTC37Q6PGP7 1564 aa25.13■■□□□ 1.61
CLDND1-211ENST00000506575 CCDC18Q5T9S5 1454 aa25.1■■□□□ 1.61
CLDND1-211ENST00000506575 FYCO1Q9BQS8 1478 aa25.09■■□□□ 1.61
CLDND1-211ENST00000506575 CFAP74Q9C0B2 1584 aa25.08■■□□□ 1.61
CLDND1-211ENST00000506575 TROQ12816 1431 aaPredicted RBP25.06■■□□□ 1.6
CLDND1-211ENST00000506575 KIF14Q15058 1648 aa25.06■■□□□ 1.6
CLDND1-211ENST00000506575 FANCAO15360 1455 aa25.05■■□□□ 1.6
CLDND1-211ENST00000506575 CEP162Q5TB80 1403 aa25.04■■□□□ 1.6
CLDND1-211ENST00000506575 MYO5CQ9NQX4 1742 aa25.02■■□□□ 1.6
CLDND1-211ENST00000506575 AKNAQ7Z591 1439 aa25.02■■□□□ 1.6
CLDND1-211ENST00000506575 RAPGEF3O95398 923 aa25.01■■□□□ 1.59
CLDND1-211ENST00000506575 PLCH2O75038 1416 aa25■■□□□ 1.59
CLDND1-211ENST00000506575 KDM4FA0A1W2PPD8 638 aa24.99■■□□□ 1.59
CLDND1-211ENST00000506575 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
CLDND1-211ENST00000506575 DENND4BO75064 1496 aaPredicted RBP24.97■■□□□ 1.59
CLDND1-211ENST00000506575 ADGRL1O94910 1474 aa24.96■■□□□ 1.59
CLDND1-211ENST00000506575 FRMPD1Q5SYB0 1578 aa24.95■■□□□ 1.58
CLDND1-211ENST00000506575 RICTORQ6R327 1708 aa24.93■■□□□ 1.58
CLDND1-211ENST00000506575 EFCAB2Q5VUJ9 269 aa24.93■■□□□ 1.58
CLDND1-211ENST00000506575 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
CLDND1-211ENST00000506575 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms