RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
CDC42SE2-209ENST00000506419 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
CDC42SE2-209ENST00000506419 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
CDC42SE2-209ENST00000506419 CUL7Q14999 1698 aa24.75■■□□□ 1.55
CDC42SE2-209ENST00000506419 NPM1P06748 294 aaKnown RBP eCLIP24.63■■□□□ 1.53
CDC42SE2-209ENST00000506419 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
CDC42SE2-209ENST00000506419 PTPRGP23470 1445 aa24.6■■□□□ 1.53
CDC42SE2-209ENST00000506419 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
CDC42SE2-209ENST00000506419 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
CDC42SE2-209ENST00000506419 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
CDC42SE2-209ENST00000506419 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
CDC42SE2-209ENST00000506419 CARMIL2Q6F5E8 1435 aa24.53■■□□□ 1.52
CDC42SE2-209ENST00000506419 IQGAP2Q13576 1575 aa24.5■■□□□ 1.51
CDC42SE2-209ENST00000506419 DISP1Q96F81 1524 aa24.49■■□□□ 1.51
CDC42SE2-209ENST00000506419 ABCC10Q5T3U5 1492 aa24.48■■□□□ 1.51
CDC42SE2-209ENST00000506419 MAPKBP1O60336 1514 aa24.45■■□□□ 1.51
CDC42SE2-209ENST00000506419 KIF13AQ9H1H9 1805 aa24.42■■□□□ 1.5
CDC42SE2-209ENST00000506419 PRXQ9BXM0 1461 aa24.42■■□□□ 1.5
CDC42SE2-209ENST00000506419 UGGT2Q9NYU1 1516 aa24.41■■□□□ 1.5
CDC42SE2-209ENST00000506419 UACAQ9BZF9 1416 aa24.38■■□□□ 1.49
CDC42SE2-209ENST00000506419 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
CDC42SE2-209ENST00000506419 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
CDC42SE2-209ENST00000506419 UHRF1BP1LA0JNW5 1464 aa24.35■■□□□ 1.49
CDC42SE2-209ENST00000506419 DIP2BQ9P265 1576 aa24.34■■□□□ 1.49
CDC42SE2-209ENST00000506419 ASXL2Q76L83 1435 aa24.3■■□□□ 1.48
CDC42SE2-209ENST00000506419 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
CDC42SE2-209ENST00000506419 PLB1Q6P1J6 1458 aa24.25■■□□□ 1.47
CDC42SE2-209ENST00000506419 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
CDC42SE2-209ENST00000506419 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
CDC42SE2-209ENST00000506419 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
CDC42SE2-209ENST00000506419 GOLGA3Q08378 1498 aa24.21■■□□□ 1.47
CDC42SE2-209ENST00000506419 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
CDC42SE2-209ENST00000506419 CTTNBP2Q8WZ74 1663 aa24.18■■□□□ 1.46
CDC42SE2-209ENST00000506419 GLI2P10070 1586 aa24.14■■□□□ 1.45
CDC42SE2-209ENST00000506419 EEA1Q15075 1411 aa24.14■■□□□ 1.45
CDC42SE2-209ENST00000506419 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
CDC42SE2-209ENST00000506419 EPRSP07814 1512 aaKnown RBP24.14■■□□□ 1.45
CDC42SE2-209ENST00000506419 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
CDC42SE2-209ENST00000506419 ABCA8O94911 1581 aa24.11■■□□□ 1.45
CDC42SE2-209ENST00000506419 ZCCHC11Q5TAX3 1644 aaKnown RBP24.1■■□□□ 1.45
CDC42SE2-209ENST00000506419 KCNH8Q96L42 1107 aa24.09■■□□□ 1.45
CDC42SE2-209ENST00000506419 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.45
CDC42SE2-209ENST00000506419 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
CDC42SE2-209ENST00000506419 KDM6BO15054 1643 aa24.06■■□□□ 1.44
CDC42SE2-209ENST00000506419 WDR7Q9Y4E6 1490 aa24.04■■□□□ 1.44
CDC42SE2-209ENST00000506419 PPRC1Q5VV67 1664 aaKnown RBP24.03■■□□□ 1.44
CDC42SE2-209ENST00000506419 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
CDC42SE2-209ENST00000506419 ATP10BO94823 1461 aa24■■□□□ 1.43
CDC42SE2-209ENST00000506419 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
CDC42SE2-209ENST00000506419 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
CDC42SE2-209ENST00000506419 EHMT2Q96KQ7 1210 aa23.97■■□□□ 1.43
CDC42SE2-209ENST00000506419 MAP3K4Q9Y6R4 1608 aa23.96■■□□□ 1.43
CDC42SE2-209ENST00000506419 CD109Q6YHK3 1445 aa23.94■■□□□ 1.42
CDC42SE2-209ENST00000506419 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
CDC42SE2-209ENST00000506419 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
CDC42SE2-209ENST00000506419 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
CDC42SE2-209ENST00000506419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
CDC42SE2-209ENST00000506419 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
CDC42SE2-209ENST00000506419 KIF21BO75037 1637 aa23.88■■□□□ 1.41
CDC42SE2-209ENST00000506419 MAGI3Q5TCQ9 1506 aa23.87■■□□□ 1.41
CDC42SE2-209ENST00000506419 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.41
CDC42SE2-209ENST00000506419 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
CDC42SE2-209ENST00000506419 CFAP43Q8NDM7 1665 aa23.78■■□□□ 1.4
CDC42SE2-209ENST00000506419 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
CDC42SE2-209ENST00000506419 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
CDC42SE2-209ENST00000506419 ABCA9Q8IUA7 1624 aa23.69■■□□□ 1.38
CDC42SE2-209ENST00000506419 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
CDC42SE2-209ENST00000506419 RAPGEF3O95398 923 aa23.68■■□□□ 1.38
CDC42SE2-209ENST00000506419 ARAP3Q8WWN8 1544 aa23.68■■□□□ 1.38
CDC42SE2-209ENST00000506419 ATP1B4Q9UN42 357 aaPredicted RBP23.67■■□□□ 1.38
CDC42SE2-209ENST00000506419 ADGRL1O94910 1474 aa23.67■■□□□ 1.38
CDC42SE2-209ENST00000506419 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
CDC42SE2-209ENST00000506419 FMN1Q68DA7 1419 aa23.6■■□□□ 1.37
CDC42SE2-209ENST00000506419 CDK13Q14004 1512 aaKnown RBP23.6■■□□□ 1.37
CDC42SE2-209ENST00000506419 NEO1Q92859 1461 aa23.6■■□□□ 1.37
CDC42SE2-209ENST00000506419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.36
CDC42SE2-209ENST00000506419 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
CDC42SE2-209ENST00000506419 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
CDC42SE2-209ENST00000506419 FANCAO15360 1455 aa23.49■■□□□ 1.35
CDC42SE2-209ENST00000506419 PLCH2O75038 1416 aa23.47■■□□□ 1.35
CDC42SE2-209ENST00000506419 DENND4BO75064 1496 aaPredicted RBP23.47■■□□□ 1.35
CDC42SE2-209ENST00000506419 TTC37Q6PGP7 1564 aa23.47■■□□□ 1.35
CDC42SE2-209ENST00000506419 HECW1Q76N89 1606 aa23.44■■□□□ 1.34
CDC42SE2-209ENST00000506419 FRMPD1Q5SYB0 1578 aa23.44■■□□□ 1.34
CDC42SE2-209ENST00000506419 EFCAB2Q5VUJ9 269 aa23.42■■□□□ 1.34
CDC42SE2-209ENST00000506419 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
CDC42SE2-209ENST00000506419 CASKIN1Q8WXD9 1431 aa23.41■■□□□ 1.34
CDC42SE2-209ENST00000506419 SCAPERQ9BY12 1400 aa23.39■■□□□ 1.33
CDC42SE2-209ENST00000506419 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
CDC42SE2-209ENST00000506419 CLIP1P30622 1438 aa23.37■■□□□ 1.33
CDC42SE2-209ENST00000506419 KIF14Q15058 1648 aa23.33■■□□□ 1.33
CDC42SE2-209ENST00000506419 RICTORQ6R327 1708 aa23.33■■□□□ 1.32
CDC42SE2-209ENST00000506419 LRRIQ1Q96JM4 1722 aa23.33■■□□□ 1.32
CDC42SE2-209ENST00000506419 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.32
CDC42SE2-209ENST00000506419 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
CDC42SE2-209ENST00000506419 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
CDC42SE2-209ENST00000506419 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
CDC42SE2-209ENST00000506419 POGZQ7Z3K3 1410 aa23.29■■□□□ 1.32
CDC42SE2-209ENST00000506419 ADAMTSL3P82987 1691 aa23.28■■□□□ 1.32
CDC42SE2-209ENST00000506419 PTPRMP28827 1452 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 1954.6 ms