RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 RUSC2Q8N2Y8 1516 aa34.64■■■■□ 3.14
UBE2D3-220ENST00000505307 CUL7Q14999 1698 aa34.63■■■■□ 3.13
UBE2D3-220ENST00000505307 KIAA0586Q9BVV6 1533 aa34.57■■■■□ 3.12
UBE2D3-220ENST00000505307 CARMIL1Q5VZK9 1371 aa34.5■■■■□ 3.11
UBE2D3-220ENST00000505307 NPM1P06748 294 aaKnown RBP eCLIP34.38■■■■□ 3.09
UBE2D3-220ENST00000505307 CARMIL2Q6F5E8 1435 aa34.26■■■■□ 3.07
UBE2D3-220ENST00000505307 MAPKBP1O60336 1514 aa34.23■■■■□ 3.07
UBE2D3-220ENST00000505307 ADCY10Q96PN6 1610 aa34.22■■■■□ 3.07
UBE2D3-220ENST00000505307 PTPRGP23470 1445 aa34.22■■■■□ 3.07
UBE2D3-220ENST00000505307 IQGAP2Q13576 1575 aa34.21■■■■□ 3.07
UBE2D3-220ENST00000505307 RAPGEF2Q9Y4G8 1499 aa34.2■■■■□ 3.07
UBE2D3-220ENST00000505307 KIF13AQ9H1H9 1805 aa34.19■■■■□ 3.06
UBE2D3-220ENST00000505307 ABCC10Q5T3U5 1492 aa34.19■■■■□ 3.06
UBE2D3-220ENST00000505307 TNIKQ9UKE5 1360 aa34.18■■■■□ 3.06
UBE2D3-220ENST00000505307 FAM69CQ0P6D2 419 aa34.15■■■■□ 3.06
UBE2D3-220ENST00000505307 TTBK1Q5TCY1 1321 aaPredicted RBP34.04■■■■□ 3.04
UBE2D3-220ENST00000505307 DIP2BQ9P265 1576 aa34.04■■■■□ 3.04
UBE2D3-220ENST00000505307 AEBP2Q6ZN18 517 aaPredicted RBP34.03■■■■□ 3.04
UBE2D3-220ENST00000505307 DISP1Q96F81 1524 aa34.03■■■■□ 3.04
UBE2D3-220ENST00000505307 UGGT2Q9NYU1 1516 aa34.03■■■■□ 3.04
UBE2D3-220ENST00000505307 ABCC2Q92887 1545 aa34■■■■□ 3.03
UBE2D3-220ENST00000505307 UHRF1BP1LA0JNW5 1464 aa33.98■■■■□ 3.03
UBE2D3-220ENST00000505307 UACAQ9BZF9 1416 aa33.96■■■■□ 3.03
UBE2D3-220ENST00000505307 PLB1Q6P1J6 1458 aa33.88■■■■□ 3.01
UBE2D3-220ENST00000505307 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
UBE2D3-220ENST00000505307 KIAA0556O60303 1618 aa33.87■■■■□ 3.01
UBE2D3-220ENST00000505307 ASXL2Q76L83 1435 aa33.85■■■■□ 3.01
UBE2D3-220ENST00000505307 CTTNBP2Q8WZ74 1663 aa33.83■■■■□ 3.01
UBE2D3-220ENST00000505307 GOLGA3Q08378 1498 aa33.82■■■■□ 3
UBE2D3-220ENST00000505307 KDM5BQ9UGL1 1544 aa33.81■■■■□ 3
UBE2D3-220ENST00000505307 GLI2P10070 1586 aa33.76■■■□□ 2.99
UBE2D3-220ENST00000505307 TSPOAP1O95153 1857 aa33.73■■■□□ 2.99
UBE2D3-220ENST00000505307 KDM6BO15054 1643 aa33.71■■■□□ 2.99
UBE2D3-220ENST00000505307 CSRNP3Q8WYN3 585 aa33.69■■■□□ 2.98
UBE2D3-220ENST00000505307 ZCCHC11Q5TAX3 1644 aaKnown RBP33.65■■■□□ 2.98
UBE2D3-220ENST00000505307 EPRSP07814 1512 aaKnown RBP33.64■■■□□ 2.98
UBE2D3-220ENST00000505307 FAM9AQ8IZU1 332 aaPredicted RBP33.63■■■□□ 2.97
UBE2D3-220ENST00000505307 EEA1Q15075 1411 aa33.62■■■□□ 2.97
UBE2D3-220ENST00000505307 ABCA8O94911 1581 aa33.57■■■□□ 2.96
UBE2D3-220ENST00000505307 WDR7Q9Y4E6 1490 aa33.56■■■□□ 2.96
UBE2D3-220ENST00000505307 PPRC1Q5VV67 1664 aaKnown RBP33.54■■■□□ 2.96
UBE2D3-220ENST00000505307 MAP3K4Q9Y6R4 1608 aa33.53■■■□□ 2.96
UBE2D3-220ENST00000505307 TEX14Q8IWB6 1497 aa33.51■■■□□ 2.96
UBE2D3-220ENST00000505307 P3H3Q8IVL6 736 aa33.42■■■□□ 2.94
UBE2D3-220ENST00000505307 SAMD9Q5K651 1589 aa33.38■■■□□ 2.93
UBE2D3-220ENST00000505307 KCNH8Q96L42 1107 aa33.37■■■□□ 2.93
UBE2D3-220ENST00000505307 CD109Q6YHK3 1445 aa33.36■■■□□ 2.93
UBE2D3-220ENST00000505307 COL17A1Q9UMD9 1497 aaPredicted RBP33.34■■■□□ 2.93
UBE2D3-220ENST00000505307 MAGI3Q5TCQ9 1506 aa33.33■■■□□ 2.93
UBE2D3-220ENST00000505307 CFAP43Q8NDM7 1665 aa33.33■■■□□ 2.93
UBE2D3-220ENST00000505307 KDM4FA0A1W2PPD8 638 aa33.32■■■□□ 2.92
UBE2D3-220ENST00000505307 ATP10BO94823 1461 aa33.31■■■□□ 2.92
UBE2D3-220ENST00000505307 KIF21BO75037 1637 aa33.24■■■□□ 2.91
UBE2D3-220ENST00000505307 ARID3CA6NKF2 412 aa33.24■■■□□ 2.91
UBE2D3-220ENST00000505307 RAPGEF6Q8TEU7 1601 aa33.23■■■□□ 2.91
UBE2D3-220ENST00000505307 RANGAP1P46060 587 aaPredicted RBP33.19■■■□□ 2.9
UBE2D3-220ENST00000505307 FHOD3Q2V2M9 1422 aa33.16■■■□□ 2.9
UBE2D3-220ENST00000505307 CHIC1Q5VXU3 224 aa33.15■■■□□ 2.9
UBE2D3-220ENST00000505307 EFCAB5A4FU69 1503 aa33.14■■■□□ 2.9
UBE2D3-220ENST00000505307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.14■■■□□ 2.9
UBE2D3-220ENST00000505307 HNRNPUL2Q1KMD3 747 aaKnown RBP33.14■■■□□ 2.9
UBE2D3-220ENST00000505307 NUP153P49790 1475 aaKnown RBP33.12■■■□□ 2.89
UBE2D3-220ENST00000505307 PHLDB1Q86UU1 1377 aa33.11■■■□□ 2.89
UBE2D3-220ENST00000505307 ABCA9Q8IUA7 1624 aa33.1■■■□□ 2.89
UBE2D3-220ENST00000505307 ADGRL1O94910 1474 aa33.09■■■□□ 2.89
UBE2D3-220ENST00000505307 ARAP3Q8WWN8 1544 aa33.07■■■□□ 2.89
UBE2D3-220ENST00000505307 PLEKHD1A6NEE1 506 aa33.03■■■□□ 2.88
UBE2D3-220ENST00000505307 UBTFP17480 764 aaKnown RBP33.03■■■□□ 2.88
UBE2D3-220ENST00000505307 NEO1Q92859 1461 aa32.98■■■□□ 2.87
UBE2D3-220ENST00000505307 EHMT2Q96KQ7 1210 aa32.89■■■□□ 2.86
UBE2D3-220ENST00000505307 FMN1Q68DA7 1419 aa32.88■■■□□ 2.85
UBE2D3-220ENST00000505307 RAPGEF3O95398 923 aa32.83■■■□□ 2.85
UBE2D3-220ENST00000505307 ARHGAP35Q9NRY4 1499 aa32.82■■■□□ 2.84
UBE2D3-220ENST00000505307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.78■■■□□ 2.846e-33■□□□□ 10.7
UBE2D3-220ENST00000505307 CDK13Q14004 1512 aaKnown RBP32.77■■■□□ 2.84
UBE2D3-220ENST00000505307 CDK11AQ9UQ88 783 aaPredicted RBP32.75■■■□□ 2.83
UBE2D3-220ENST00000505307 HECW1Q76N89 1606 aa32.75■■■□□ 2.83
UBE2D3-220ENST00000505307 CFAP74Q9C0B2 1584 aa32.75■■■□□ 2.83
UBE2D3-220ENST00000505307 FANCAO15360 1455 aa32.74■■■□□ 2.83
UBE2D3-220ENST00000505307 ATP1B4Q9UN42 357 aaPredicted RBP32.74■■■□□ 2.83
UBE2D3-220ENST00000505307 AKNAQ7Z591 1439 aa32.74■■■□□ 2.83
UBE2D3-220ENST00000505307 DENND4BO75064 1496 aaPredicted RBP32.73■■■□□ 2.83
UBE2D3-220ENST00000505307 FRMPD1Q5SYB0 1578 aa32.7■■■□□ 2.82
UBE2D3-220ENST00000505307 TTC37Q6PGP7 1564 aa32.69■■■□□ 2.82
UBE2D3-220ENST00000505307 PLCH2O75038 1416 aa32.64■■■□□ 2.82
UBE2D3-220ENST00000505307 RICTORQ6R327 1708 aa32.6■■■□□ 2.81
UBE2D3-220ENST00000505307 ARID4BQ4LE39 1312 aaPredicted RBP32.57■■■□□ 2.8
UBE2D3-220ENST00000505307 TROQ12816 1431 aaPredicted RBP32.57■■■□□ 2.8
UBE2D3-220ENST00000505307 ARHGEF40Q8TER5 1519 aa32.56■■■□□ 2.8
UBE2D3-220ENST00000505307 EFCAB2Q5VUJ9 269 aa32.56■■■□□ 2.8
UBE2D3-220ENST00000505307 HECW2Q9P2P5 1572 aa32.56■■■□□ 2.8
UBE2D3-220ENST00000505307 ADAMTSL3P82987 1691 aa32.56■■■□□ 2.8
UBE2D3-220ENST00000505307 CLIP1P30622 1438 aa32.55■■■□□ 2.8
UBE2D3-220ENST00000505307 ZMYM4Q5VZL5 1548 aa32.55■■■□□ 2.8
UBE2D3-220ENST00000505307 MAGI2Q86UL8 1455 aa32.54■■■□□ 2.8
UBE2D3-220ENST00000505307 SCAPERQ9BY12 1400 aa32.52■■■□□ 2.8
UBE2D3-220ENST00000505307 CASKIN1Q8WXD9 1431 aa32.51■■■□□ 2.8
UBE2D3-220ENST00000505307 KIF14Q15058 1648 aa32.51■■■□□ 2.8
UBE2D3-220ENST00000505307 BCORL1Q5H9F3 1711 aa32.5■■■□□ 2.79
UBE2D3-220ENST00000505307 PTPRMP28827 1452 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 1446.6 ms