RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
UBE2D3-219ENST00000505207 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
UBE2D3-219ENST00000505207 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBE2D3-219ENST00000505207 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
UBE2D3-219ENST00000505207 IGF1RP08069 1367 aa19.35■□□□□ 0.69
UBE2D3-219ENST00000505207 KIAA0586Q9BVV6 1533 aa19.31■□□□□ 0.68
UBE2D3-219ENST00000505207 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
UBE2D3-219ENST00000505207 CUL7Q14999 1698 aa19.27■□□□□ 0.67
UBE2D3-219ENST00000505207 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
UBE2D3-219ENST00000505207 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
UBE2D3-219ENST00000505207 ABCC10Q5T3U5 1492 aa19.2■□□□□ 0.66
UBE2D3-219ENST00000505207 CARMIL2Q6F5E8 1435 aa19.19■□□□□ 0.66
UBE2D3-219ENST00000505207 MAPKBP1O60336 1514 aa19.19■□□□□ 0.66
UBE2D3-219ENST00000505207 PTPRGP23470 1445 aa19.18■□□□□ 0.66
UBE2D3-219ENST00000505207 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
UBE2D3-219ENST00000505207 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
UBE2D3-219ENST00000505207 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
UBE2D3-219ENST00000505207 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
UBE2D3-219ENST00000505207 DIP2BQ9P265 1576 aa19.08■□□□□ 0.65
UBE2D3-219ENST00000505207 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
UBE2D3-219ENST00000505207 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
UBE2D3-219ENST00000505207 ABCC2Q92887 1545 aa19.03■□□□□ 0.64
UBE2D3-219ENST00000505207 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
UBE2D3-219ENST00000505207 UACAQ9BZF9 1416 aa19■□□□□ 0.63
UBE2D3-219ENST00000505207 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
UBE2D3-219ENST00000505207 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
UBE2D3-219ENST00000505207 KDM6BO15054 1643 aa18.97■□□□□ 0.63
UBE2D3-219ENST00000505207 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
UBE2D3-219ENST00000505207 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
UBE2D3-219ENST00000505207 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
UBE2D3-219ENST00000505207 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
UBE2D3-219ENST00000505207 GLI2P10070 1586 aa18.91■□□□□ 0.62
UBE2D3-219ENST00000505207 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
UBE2D3-219ENST00000505207 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
UBE2D3-219ENST00000505207 KIAA0556O60303 1618 aa18.86■□□□□ 0.61
UBE2D3-219ENST00000505207 EPRSP07814 1512 aaKnown RBP18.84■□□□□ 0.61
UBE2D3-219ENST00000505207 KDM4FA0A1W2PPD8 638 aa18.84■□□□□ 0.61
UBE2D3-219ENST00000505207 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
UBE2D3-219ENST00000505207 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
UBE2D3-219ENST00000505207 ZCCHC11Q5TAX3 1644 aaKnown RBP18.79■□□□□ 0.6
UBE2D3-219ENST00000505207 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
UBE2D3-219ENST00000505207 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
UBE2D3-219ENST00000505207 MAP3K4Q9Y6R4 1608 aa18.75■□□□□ 0.59
UBE2D3-219ENST00000505207 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
UBE2D3-219ENST00000505207 PPRC1Q5VV67 1664 aaKnown RBP18.75■□□□□ 0.59
UBE2D3-219ENST00000505207 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
UBE2D3-219ENST00000505207 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
UBE2D3-219ENST00000505207 ABCA8O94911 1581 aa18.71■□□□□ 0.59
UBE2D3-219ENST00000505207 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
UBE2D3-219ENST00000505207 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
UBE2D3-219ENST00000505207 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
UBE2D3-219ENST00000505207 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
UBE2D3-219ENST00000505207 EEA1Q15075 1411 aa18.64■□□□□ 0.57
UBE2D3-219ENST00000505207 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
UBE2D3-219ENST00000505207 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
UBE2D3-219ENST00000505207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
UBE2D3-219ENST00000505207 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-219ENST00000505207 ATP10BO94823 1461 aa18.59■□□□□ 0.57
UBE2D3-219ENST00000505207 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
UBE2D3-219ENST00000505207 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-219ENST00000505207 SAMD9Q5K651 1589 aa18.53■□□□□ 0.56
UBE2D3-219ENST00000505207 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
UBE2D3-219ENST00000505207 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
UBE2D3-219ENST00000505207 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
UBE2D3-219ENST00000505207 ABCA9Q8IUA7 1624 aa18.47■□□□□ 0.55
UBE2D3-219ENST00000505207 NEO1Q92859 1461 aa18.46■□□□□ 0.55
UBE2D3-219ENST00000505207 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
UBE2D3-219ENST00000505207 NUP153P49790 1475 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-219ENST00000505207 RAPGEF3O95398 923 aa18.43■□□□□ 0.54
UBE2D3-219ENST00000505207 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
UBE2D3-219ENST00000505207 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
UBE2D3-219ENST00000505207 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
UBE2D3-219ENST00000505207 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
UBE2D3-219ENST00000505207 KIF21BO75037 1637 aa18.38■□□□□ 0.53
UBE2D3-219ENST00000505207 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
UBE2D3-219ENST00000505207 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
UBE2D3-219ENST00000505207 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
UBE2D3-219ENST00000505207 AKNAQ7Z591 1439 aa18.33■□□□□ 0.53
UBE2D3-219ENST00000505207 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-219ENST00000505207 FANCAO15360 1455 aa18.32■□□□□ 0.52
UBE2D3-219ENST00000505207 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
UBE2D3-219ENST00000505207 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
UBE2D3-219ENST00000505207 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
UBE2D3-219ENST00000505207 PTPRMP28827 1452 aa18.28■□□□□ 0.52
UBE2D3-219ENST00000505207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
UBE2D3-219ENST00000505207 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.52
UBE2D3-219ENST00000505207 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
UBE2D3-219ENST00000505207 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
UBE2D3-219ENST00000505207 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
UBE2D3-219ENST00000505207 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
UBE2D3-219ENST00000505207 PLCH2O75038 1416 aa18.23■□□□□ 0.51
UBE2D3-219ENST00000505207 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
UBE2D3-219ENST00000505207 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
UBE2D3-219ENST00000505207 BCORL1Q5H9F3 1711 aa18.21■□□□□ 0.51
UBE2D3-219ENST00000505207 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
UBE2D3-219ENST00000505207 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
UBE2D3-219ENST00000505207 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
UBE2D3-219ENST00000505207 TTC37Q6PGP7 1564 aa18.2■□□□□ 0.5
UBE2D3-219ENST00000505207 RICTORQ6R327 1708 aa18.2■□□□□ 0.5
UBE2D3-219ENST00000505207 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms