RNA–Protein interactions for RNA: ENST00000504325.5

RACK1-210, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-210ENST00000504325 KIF21BO75037 1637 aa15.38■□□□□ 0.05
RACK1-210ENST00000504325 ARHGEF11O15085 1522 aa15.34■□□□□ 0.05
RACK1-210ENST00000504325 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
RACK1-210ENST00000504325 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
RACK1-210ENST00000504325 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
RACK1-210ENST00000504325 PRG4Q92954 1404 aaPredicted RBP15.33■□□□□ 0.04
RACK1-210ENST00000504325 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
RACK1-210ENST00000504325 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
RACK1-210ENST00000504325 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
RACK1-210ENST00000504325 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
RACK1-210ENST00000504325 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
RACK1-210ENST00000504325 CARMIL2Q6F5E8 1435 aa15.27■□□□□ 0.04
RACK1-210ENST00000504325 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
RACK1-210ENST00000504325 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.03
RACK1-210ENST00000504325 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
RACK1-210ENST00000504325 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
RACK1-210ENST00000504325 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
RACK1-210ENST00000504325 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
RACK1-210ENST00000504325 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
RACK1-210ENST00000504325 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.02
RACK1-210ENST00000504325 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
RACK1-210ENST00000504325 PTPRGP23470 1445 aa15.18■□□□□ 0.02
RACK1-210ENST00000504325 KIAA0556O60303 1618 aa15.17■□□□□ 0.02
RACK1-210ENST00000504325 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
RACK1-210ENST00000504325 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
RACK1-210ENST00000504325 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
RACK1-210ENST00000504325 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
RACK1-210ENST00000504325 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
RACK1-210ENST00000504325 CLIP1P30622 1438 aa15.08■□□□□ 0
RACK1-210ENST00000504325 FHOD3Q2V2M9 1422 aa15.08■□□□□ 0
RACK1-210ENST00000504325 UACAQ9BZF9 1416 aa15.08■□□□□ 0
RACK1-210ENST00000504325 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
RACK1-210ENST00000504325 UHRF1BP1LA0JNW5 1464 aa15.04■□□□□ -0
RACK1-210ENST00000504325 CEP162Q5TB80 1403 aa15.04■□□□□ -0
RACK1-210ENST00000504325 PLB1Q6P1J6 1458 aa15.03■□□□□ -0
RACK1-210ENST00000504325 FMN1Q68DA7 1419 aa15.02■□□□□ -0
RACK1-210ENST00000504325 ABCC2Q92887 1545 aa15.01□□□□□ -0.01
RACK1-210ENST00000504325 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
RACK1-210ENST00000504325 ABCA8O94911 1581 aa15□□□□□ -0.01
RACK1-210ENST00000504325 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
RACK1-210ENST00000504325 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
RACK1-210ENST00000504325 ATP1B4Q9UN42 357 aaPredicted RBP14.94□□□□□ -0.02
RACK1-210ENST00000504325 ARID3CA6NKF2 412 aa14.92□□□□□ -0.02
RACK1-210ENST00000504325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
RACK1-210ENST00000504325 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
RACK1-210ENST00000504325 ATP10BO94823 1461 aa14.92□□□□□ -0.02
RACK1-210ENST00000504325 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
RACK1-210ENST00000504325 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
RACK1-210ENST00000504325 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
RACK1-210ENST00000504325 ASXL2Q76L83 1435 aa14.89□□□□□ -0.03
RACK1-210ENST00000504325 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
RACK1-210ENST00000504325 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
RACK1-210ENST00000504325 HECW1Q76N89 1606 aa14.87□□□□□ -0.03
RACK1-210ENST00000504325 FYCO1Q9BQS8 1478 aa14.87□□□□□ -0.03
RACK1-210ENST00000504325 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
RACK1-210ENST00000504325 PLEKHD1A6NEE1 506 aa14.86□□□□□ -0.03
RACK1-210ENST00000504325 EPRSP07814 1512 aaKnown RBP14.86□□□□□ -0.03
RACK1-210ENST00000504325 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
RACK1-210ENST00000504325 PCF11O94913 1555 aaKnown RBP14.85□□□□□ -0.03
RACK1-210ENST00000504325 ABCC10Q5T3U5 1492 aa14.83□□□□□ -0.03
RACK1-210ENST00000504325 WDR7Q9Y4E6 1490 aa14.83□□□□□ -0.03
RACK1-210ENST00000504325 FAM69CQ0P6D2 419 aa14.83□□□□□ -0.04
RACK1-210ENST00000504325 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
RACK1-210ENST00000504325 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
RACK1-210ENST00000504325 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
RACK1-210ENST00000504325 DIP2BQ9P265 1576 aa14.77□□□□□ -0.05
RACK1-210ENST00000504325 APLP2Q06481 763 aa14.75□□□□□ -0.05
RACK1-210ENST00000504325 GLI2P10070 1586 aa14.75□□□□□ -0.05
RACK1-210ENST00000504325 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
RACK1-210ENST00000504325 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
RACK1-210ENST00000504325 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
RACK1-210ENST00000504325 MAP3K1Q13233 1512 aa14.71□□□□□ -0.06
RACK1-210ENST00000504325 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.06
RACK1-210ENST00000504325 CD109Q6YHK3 1445 aa14.7□□□□□ -0.06
RACK1-210ENST00000504325 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
RACK1-210ENST00000504325 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
RACK1-210ENST00000504325 ABCA9Q8IUA7 1624 aa14.66□□□□□ -0.06
RACK1-210ENST00000504325 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
RACK1-210ENST00000504325 MAP3K4Q9Y6R4 1608 aa14.66□□□□□ -0.06
RACK1-210ENST00000504325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.061e-34■■□□□ 13
RACK1-210ENST00000504325 LRRC9Q6ZRR7 1453 aa14.65□□□□□ -0.06
RACK1-210ENST00000504325 KIF14Q15058 1648 aa14.65□□□□□ -0.06
RACK1-210ENST00000504325 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
RACK1-210ENST00000504325 EHBP1L1Q8N3D4 1523 aa14.64□□□□□ -0.07
RACK1-210ENST00000504325 TEX14Q8IWB6 1497 aa14.63□□□□□ -0.07
RACK1-210ENST00000504325 PLCH2O75038 1416 aa14.62□□□□□ -0.07
RACK1-210ENST00000504325 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
RACK1-210ENST00000504325 EFCAB2Q5VUJ9 269 aa14.6□□□□□ -0.07
RACK1-210ENST00000504325 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
RACK1-210ENST00000504325 CCNB3Q8WWL7 1395 aa14.6□□□□□ -0.07
RACK1-210ENST00000504325 TSPOAP1O95153 1857 aa14.59□□□□□ -0.07
RACK1-210ENST00000504325 PPRC1Q5VV67 1664 aaKnown RBP14.58□□□□□ -0.08
RACK1-210ENST00000504325 NCOA2Q15596 1464 aa14.57□□□□□ -0.08
RACK1-210ENST00000504325 ARAP3Q8WWN8 1544 aa14.57□□□□□ -0.08
RACK1-210ENST00000504325 GPATCH8Q9UKJ3 1502 aaKnown RBP14.57□□□□□ -0.08
RACK1-210ENST00000504325 FANCAO15360 1455 aa14.57□□□□□ -0.08
RACK1-210ENST00000504325 NEO1Q92859 1461 aa14.57□□□□□ -0.08
RACK1-210ENST00000504325 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
RACK1-210ENST00000504325 CFDP1Q9UEE9 299 aaPredicted RBP14.56□□□□□ -0.08
RACK1-210ENST00000504325 AKNAQ7Z591 1439 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms