RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 AQRO60306 1485 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX25-202ENST00000504273 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
SNX25-202ENST00000504273 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
SNX25-202ENST00000504273 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
SNX25-202ENST00000504273 ADGRL1O94910 1474 aa11.07□□□□□ -0.64
SNX25-202ENST00000504273 CUX1P39880 1505 aa11.06□□□□□ -0.64
SNX25-202ENST00000504273 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
SNX25-202ENST00000504273 SNAPC4Q5SXM2 1469 aa11.02□□□□□ -0.65
SNX25-202ENST00000504273 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
SNX25-202ENST00000504273 MAPKBP1O60336 1514 aa11.02□□□□□ -0.65
SNX25-202ENST00000504273 DISP3Q9P2K9 1392 aa11.01□□□□□ -0.65
SNX25-202ENST00000504273 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
SNX25-202ENST00000504273 ILDR2Q71H61 639 aa10.99□□□□□ -0.65
SNX25-202ENST00000504273 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
SNX25-202ENST00000504273 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
SNX25-202ENST00000504273 DIP2BQ9P265 1576 aa10.97□□□□□ -0.65
SNX25-202ENST00000504273 PRXQ9BXM0 1461 aa10.96□□□□□ -0.65
SNX25-202ENST00000504273 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNX25-202ENST00000504273 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
SNX25-202ENST00000504273 POLA1P09884 1462 aaPredicted RBP10.93□□□□□ -0.66
SNX25-202ENST00000504273 CLIP1P30622 1438 aa10.92□□□□□ -0.66
SNX25-202ENST00000504273 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
SNX25-202ENST00000504273 SPATA31D1Q6ZQQ2 1576 aa10.91□□□□□ -0.66
SNX25-202ENST00000504273 CEP170Q5SW79 1584 aa10.9□□□□□ -0.66
SNX25-202ENST00000504273 ZEB1P37275 1124 aaPredicted RBP10.89□□□□□ -0.67
SNX25-202ENST00000504273 TTBK1Q5TCY1 1321 aaPredicted RBP10.89□□□□□ -0.67
SNX25-202ENST00000504273 VPS8Q8N3P4 1428 aa10.88□□□□□ -0.67
SNX25-202ENST00000504273 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
SNX25-202ENST00000504273 KIF27Q86VH2 1401 aa10.86□□□□□ -0.67
SNX25-202ENST00000504273 TDRD9Q8NDG6 1382 aaKnown RBP10.86□□□□□ -0.67
SNX25-202ENST00000504273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
SNX25-202ENST00000504273 FGD5Q6ZNL6 1462 aa10.85□□□□□ -0.67
SNX25-202ENST00000504273 NUP160Q12769 1436 aa10.83□□□□□ -0.68
SNX25-202ENST00000504273 IGF1RP08069 1367 aa10.82□□□□□ -0.68
SNX25-202ENST00000504273 GLI2P10070 1586 aa10.82□□□□□ -0.68
SNX25-202ENST00000504273 PBRM1Q86U86 1689 aa10.81□□□□□ -0.68
SNX25-202ENST00000504273 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
SNX25-202ENST00000504273 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
SNX25-202ENST00000504273 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
SNX25-202ENST00000504273 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
SNX25-202ENST00000504273 GRIN2AQ12879 1464 aa10.78□□□□□ -0.68
SNX25-202ENST00000504273 ARHGAP35Q9NRY4 1499 aa10.78□□□□□ -0.68
SNX25-202ENST00000504273 TEX14Q8IWB6 1497 aa10.76□□□□□ -0.69
SNX25-202ENST00000504273 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
SNX25-202ENST00000504273 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
SNX25-202ENST00000504273 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
SNX25-202ENST00000504273 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
SNX25-202ENST00000504273 PPRC1Q5VV67 1664 aaKnown RBP10.71□□□□□ -0.69
SNX25-202ENST00000504273 PRG4Q92954 1404 aaPredicted RBP10.71□□□□□ -0.7
SNX25-202ENST00000504273 PCF11O94913 1555 aaKnown RBP10.71□□□□□ -0.7
SNX25-202ENST00000504273 PLB1Q6P1J6 1458 aa10.71□□□□□ -0.7
SNX25-202ENST00000504273 KIAA0586Q9BVV6 1533 aa10.7□□□□□ -0.7
SNX25-202ENST00000504273 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
SNX25-202ENST00000504273 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
SNX25-202ENST00000504273 ADAMTS12P58397 1594 aa10.67□□□□□ -0.7
SNX25-202ENST00000504273 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
SNX25-202ENST00000504273 CUL7Q14999 1698 aa10.66□□□□□ -0.7
SNX25-202ENST00000504273 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
SNX25-202ENST00000504273 FHAD1B1AJZ9 1412 aa10.65□□□□□ -0.7
SNX25-202ENST00000504273 IQSEC2Q5JU85 1478 aa10.65□□□□□ -0.71
SNX25-202ENST00000504273 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
SNX25-202ENST00000504273 TIAM1Q13009 1591 aa10.64□□□□□ -0.71
SNX25-202ENST00000504273 PTPRMP28827 1452 aa10.63□□□□□ -0.71
SNX25-202ENST00000504273 APLP2Q06481 763 aa10.63□□□□□ -0.71
SNX25-202ENST00000504273 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
SNX25-202ENST00000504273 MAP3K1Q13233 1512 aa10.62□□□□□ -0.71
SNX25-202ENST00000504273 MAP3K4Q9Y6R4 1608 aa10.61□□□□□ -0.71
SNX25-202ENST00000504273 ADAMTSL3P82987 1691 aa10.61□□□□□ -0.71
SNX25-202ENST00000504273 CFAP43Q8NDM7 1665 aa10.61□□□□□ -0.71
SNX25-202ENST00000504273 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
SNX25-202ENST00000504273 LRRIQ1Q96JM4 1722 aa10.59□□□□□ -0.71
SNX25-202ENST00000504273 DMRT2Q9Y5R5 561 aa10.58□□□□□ -0.72
SNX25-202ENST00000504273 LRRC9Q6ZRR7 1453 aa10.57□□□□□ -0.72
SNX25-202ENST00000504273 ABCC2Q92887 1545 aa10.57□□□□□ -0.72
SNX25-202ENST00000504273 EFCAB5A4FU69 1503 aa10.56□□□□□ -0.72
SNX25-202ENST00000504273 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
SNX25-202ENST00000504273 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
SNX25-202ENST00000504273 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
SNX25-202ENST00000504273 DHX57Q6P158 1386 aaKnown RBP10.55□□□□□ -0.72
SNX25-202ENST00000504273 P3H3Q8IVL6 736 aa10.55□□□□□ -0.72
SNX25-202ENST00000504273 UHRF1BP1LA0JNW5 1464 aa10.54□□□□□ -0.72
SNX25-202ENST00000504273 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
SNX25-202ENST00000504273 PHLDB1Q86UU1 1377 aa10.53□□□□□ -0.72
SNX25-202ENST00000504273 MYT1Q01538 1121 aa10.52□□□□□ -0.73
SNX25-202ENST00000504273 EPRSP07814 1512 aaKnown RBP10.52□□□□□ -0.73
SNX25-202ENST00000504273 FYCO1Q9BQS8 1478 aa10.52□□□□□ -0.73
SNX25-202ENST00000504273 CASKIN1Q8WXD9 1431 aa10.52□□□□□ -0.73
SNX25-202ENST00000504273 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
SNX25-202ENST00000504273 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
SNX25-202ENST00000504273 BCORL1Q5H9F3 1711 aa10.48□□□□□ -0.73
SNX25-202ENST00000504273 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
SNX25-202ENST00000504273 PLPPR3Q6T4P5 718 aa10.47□□□□□ -0.73
SNX25-202ENST00000504273 PTPRGP23470 1445 aa10.46□□□□□ -0.73
SNX25-202ENST00000504273 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
SNX25-202ENST00000504273 CLSPNQ9HAW4 1339 aa10.45□□□□□ -0.74
SNX25-202ENST00000504273 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
SNX25-202ENST00000504273 PTPRTO14522 1441 aa10.44□□□□□ -0.74
SNX25-202ENST00000504273 FMN1Q68DA7 1419 aa10.44□□□□□ -0.74
SNX25-202ENST00000504273 YEATS2Q9ULM3 1422 aa10.43□□□□□ -0.74
SNX25-202ENST00000504273 RAB3GAP2Q9H2M9 1393 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms