RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
PDLIM5-207ENST00000503974 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
PDLIM5-207ENST00000503974 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
PDLIM5-207ENST00000503974 KIF21BO75037 1637 aa14.95□□□□□ -0.02
PDLIM5-207ENST00000503974 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
PDLIM5-207ENST00000503974 NUP160Q12769 1436 aa14.91□□□□□ -0.02
PDLIM5-207ENST00000503974 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-207ENST00000503974 CEP170Q5SW79 1584 aa14.89□□□□□ -0.03
PDLIM5-207ENST00000503974 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
PDLIM5-207ENST00000503974 FBLN2P98095 1184 aa14.85□□□□□ -0.03
PDLIM5-207ENST00000503974 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
PDLIM5-207ENST00000503974 CTTNBP2Q8WZ74 1663 aa14.83□□□□□ -0.04
PDLIM5-207ENST00000503974 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
PDLIM5-207ENST00000503974 KIAA0586Q9BVV6 1533 aa14.81□□□□□ -0.04
PDLIM5-207ENST00000503974 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
PDLIM5-207ENST00000503974 SHROOM2Q13796 1616 aa14.8□□□□□ -0.04
PDLIM5-207ENST00000503974 IQGAP2Q13576 1575 aa14.78□□□□□ -0.04
PDLIM5-207ENST00000503974 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
PDLIM5-207ENST00000503974 ANP32EQ9BTT0 268 aa14.7□□□□□ -0.06
PDLIM5-207ENST00000503974 TNIKQ9UKE5 1360 aa14.69□□□□□ -0.06
PDLIM5-207ENST00000503974 EIF5BO60841 1220 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-207ENST00000503974 SAMD9Q5K651 1589 aa14.67□□□□□ -0.06
PDLIM5-207ENST00000503974 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
PDLIM5-207ENST00000503974 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
PDLIM5-207ENST00000503974 DISP1Q96F81 1524 aa14.66□□□□□ -0.06
PDLIM5-207ENST00000503974 UBTFP17480 764 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-207ENST00000503974 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
PDLIM5-207ENST00000503974 KIAA0556O60303 1618 aa14.65□□□□□ -0.06
PDLIM5-207ENST00000503974 ERCC6L2Q5T890 1561 aa14.65□□□□□ -0.06
PDLIM5-207ENST00000503974 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-207ENST00000503974 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
PDLIM5-207ENST00000503974 EFCAB5A4FU69 1503 aa14.64□□□□□ -0.07
PDLIM5-207ENST00000503974 RIMBP3CA6NJZ7 1639 aa14.63□□□□□ -0.07
PDLIM5-207ENST00000503974 RIMBP3BA6NNM3 1639 aa14.63□□□□□ -0.07
PDLIM5-207ENST00000503974 RIMBP3Q9UFD9 1639 aa14.63□□□□□ -0.07
PDLIM5-207ENST00000503974 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
PDLIM5-207ENST00000503974 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
PDLIM5-207ENST00000503974 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
PDLIM5-207ENST00000503974 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
PDLIM5-207ENST00000503974 CARMIL2Q6F5E8 1435 aa14.6□□□□□ -0.07
PDLIM5-207ENST00000503974 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
PDLIM5-207ENST00000503974 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
PDLIM5-207ENST00000503974 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
PDLIM5-207ENST00000503974 CLIP1P30622 1438 aa14.55□□□□□ -0.08
PDLIM5-207ENST00000503974 FHOD3Q2V2M9 1422 aa14.51□□□□□ -0.09
PDLIM5-207ENST00000503974 PTPRGP23470 1445 aa14.5□□□□□ -0.09
PDLIM5-207ENST00000503974 ABCA8O94911 1581 aa14.47□□□□□ -0.09
PDLIM5-207ENST00000503974 RANGAP1P46060 587 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-207ENST00000503974 ZEB1P37275 1124 aaPredicted RBP14.46□□□□□ -0.09
PDLIM5-207ENST00000503974 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
PDLIM5-207ENST00000503974 UHRF1BP1LA0JNW5 1464 aa14.45□□□□□ -0.1
PDLIM5-207ENST00000503974 P3H3Q8IVL6 736 aa14.45□□□□□ -0.1
PDLIM5-207ENST00000503974 UBE2Q2Q8WVN8 375 aa14.45□□□□□ -0.1
PDLIM5-207ENST00000503974 ABCC2Q92887 1545 aa14.44□□□□□ -0.1
PDLIM5-207ENST00000503974 ADCY10Q96PN6 1610 aa14.44□□□□□ -0.1
PDLIM5-207ENST00000503974 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
PDLIM5-207ENST00000503974 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
PDLIM5-207ENST00000503974 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
PDLIM5-207ENST00000503974 PCF11O94913 1555 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-207ENST00000503974 CYB5RLQ6IPT4 315 aa14.4□□□□□ -0.1
PDLIM5-207ENST00000503974 VPS8Q8N3P4 1428 aa14.39□□□□□ -0.11
PDLIM5-207ENST00000503974 CASKIN1Q8WXD9 1431 aa14.39□□□□□ -0.11
PDLIM5-207ENST00000503974 HECW1Q76N89 1606 aa14.39□□□□□ -0.11
PDLIM5-207ENST00000503974 KDM5BQ9UGL1 1544 aa14.38□□□□□ -0.11
PDLIM5-207ENST00000503974 NUP153P49790 1475 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-207ENST00000503974 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
PDLIM5-207ENST00000503974 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
PDLIM5-207ENST00000503974 ANO8Q9HCE9 1232 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-207ENST00000503974 LRRIQ1Q96JM4 1722 aa14.36□□□□□ -0.11
PDLIM5-207ENST00000503974 ZCCHC11Q5TAX3 1644 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-207ENST00000503974 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-207ENST00000503974 ATP10BO94823 1461 aa14.31□□□□□ -0.12
PDLIM5-207ENST00000503974 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
PDLIM5-207ENST00000503974 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
PDLIM5-207ENST00000503974 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-207ENST00000503974 CFAP43Q8NDM7 1665 aa14.28□□□□□ -0.12
PDLIM5-207ENST00000503974 MAP3K1Q13233 1512 aa14.27□□□□□ -0.12
PDLIM5-207ENST00000503974 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
PDLIM5-207ENST00000503974 ASXL2Q76L83 1435 aa14.23□□□□□ -0.13
PDLIM5-207ENST00000503974 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
PDLIM5-207ENST00000503974 WDR7Q9Y4E6 1490 aa14.22□□□□□ -0.13
PDLIM5-207ENST00000503974 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.13
PDLIM5-207ENST00000503974 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
PDLIM5-207ENST00000503974 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-207ENST00000503974 DIP2BQ9P265 1576 aa14.19□□□□□ -0.14
PDLIM5-207ENST00000503974 TROQ12816 1431 aaPredicted RBP14.18□□□□□ -0.14
PDLIM5-207ENST00000503974 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
PDLIM5-207ENST00000503974 GLI2P10070 1586 aa14.18□□□□□ -0.14
PDLIM5-207ENST00000503974 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
PDLIM5-207ENST00000503974 KIF13AQ9H1H9 1805 aa14.16□□□□□ -0.14
PDLIM5-207ENST00000503974 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
PDLIM5-207ENST00000503974 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-207ENST00000503974 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
PDLIM5-207ENST00000503974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-207ENST00000503974 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-207ENST00000503974 PODXL2Q9NZ53 605 aa14.15□□□□□ -0.14
PDLIM5-207ENST00000503974 KIF14Q15058 1648 aa14.15□□□□□ -0.15
PDLIM5-207ENST00000503974 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.15
PDLIM5-207ENST00000503974 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
PDLIM5-207ENST00000503974 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms