RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 CUL7Q14999 1698 aa25.02■■□□□ 1.6
POLR2J3-207ENST00000503564 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
POLR2J3-207ENST00000503564 IGF1RP08069 1367 aa24.98■■□□□ 1.59
POLR2J3-207ENST00000503564 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
POLR2J3-207ENST00000503564 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
POLR2J3-207ENST00000503564 MAPKBP1O60336 1514 aa24.92■■□□□ 1.58
POLR2J3-207ENST00000503564 ABCC10Q5T3U5 1492 aa24.88■■□□□ 1.57
POLR2J3-207ENST00000503564 DIP2BQ9P265 1576 aa24.87■■□□□ 1.57
POLR2J3-207ENST00000503564 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
POLR2J3-207ENST00000503564 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
POLR2J3-207ENST00000503564 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
POLR2J3-207ENST00000503564 FAM69CQ0P6D2 419 aa24.77■■□□□ 1.56
POLR2J3-207ENST00000503564 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
POLR2J3-207ENST00000503564 PTPRGP23470 1445 aa24.7■■□□□ 1.55
POLR2J3-207ENST00000503564 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
POLR2J3-207ENST00000503564 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
POLR2J3-207ENST00000503564 TSPOAP1O95153 1857 aa24.66■■□□□ 1.54
POLR2J3-207ENST00000503564 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
POLR2J3-207ENST00000503564 KDM6BO15054 1643 aa24.64■■□□□ 1.54
POLR2J3-207ENST00000503564 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
POLR2J3-207ENST00000503564 UHRF1BP1LA0JNW5 1464 aa24.61■■□□□ 1.53
POLR2J3-207ENST00000503564 UGGT2Q9NYU1 1516 aa24.59■■□□□ 1.53
POLR2J3-207ENST00000503564 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.53
POLR2J3-207ENST00000503564 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
POLR2J3-207ENST00000503564 PPRC1Q5VV67 1664 aaKnown RBP24.56■■□□□ 1.52
POLR2J3-207ENST00000503564 GLI2P10070 1586 aa24.55■■□□□ 1.52
POLR2J3-207ENST00000503564 ASXL2Q76L83 1435 aa24.55■■□□□ 1.52
POLR2J3-207ENST00000503564 KIAA0556O60303 1618 aa24.54■■□□□ 1.52
POLR2J3-207ENST00000503564 UACAQ9BZF9 1416 aa24.54■■□□□ 1.52
POLR2J3-207ENST00000503564 PLB1Q6P1J6 1458 aa24.53■■□□□ 1.52
POLR2J3-207ENST00000503564 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
POLR2J3-207ENST00000503564 CTTNBP2Q8WZ74 1663 aa24.48■■□□□ 1.51
POLR2J3-207ENST00000503564 ZCCHC11Q5TAX3 1644 aaKnown RBP24.46■■□□□ 1.51
POLR2J3-207ENST00000503564 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
POLR2J3-207ENST00000503564 EPRSP07814 1512 aaKnown RBP24.42■■□□□ 1.5
POLR2J3-207ENST00000503564 KDM4FA0A1W2PPD8 638 aa24.38■■□□□ 1.49
POLR2J3-207ENST00000503564 PRXQ9BXM0 1461 aa24.34■■□□□ 1.49
POLR2J3-207ENST00000503564 COL17A1Q9UMD9 1497 aaPredicted RBP24.32■■□□□ 1.48
POLR2J3-207ENST00000503564 ABCA8O94911 1581 aa24.32■■□□□ 1.48
POLR2J3-207ENST00000503564 GOLGA3Q08378 1498 aa24.32■■□□□ 1.48
POLR2J3-207ENST00000503564 WDR7Q9Y4E6 1490 aa24.32■■□□□ 1.48
POLR2J3-207ENST00000503564 TEX14Q8IWB6 1497 aa24.3■■□□□ 1.48
POLR2J3-207ENST00000503564 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
POLR2J3-207ENST00000503564 ADGRL1O94910 1474 aa24.22■■□□□ 1.47
POLR2J3-207ENST00000503564 MAGI3Q5TCQ9 1506 aa24.18■■□□□ 1.46
POLR2J3-207ENST00000503564 CD109Q6YHK3 1445 aa24.13■■□□□ 1.45
POLR2J3-207ENST00000503564 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
POLR2J3-207ENST00000503564 ATP10BO94823 1461 aa24.07■■□□□ 1.44
POLR2J3-207ENST00000503564 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
POLR2J3-207ENST00000503564 RAPGEF6Q8TEU7 1601 aa24.02■■□□□ 1.44
POLR2J3-207ENST00000503564 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
POLR2J3-207ENST00000503564 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
POLR2J3-207ENST00000503564 CSRNP3Q8WYN3 585 aa24.01■■□□□ 1.43
POLR2J3-207ENST00000503564 ARAP3Q8WWN8 1544 aa23.99■■□□□ 1.43
POLR2J3-207ENST00000503564 ARID3CA6NKF2 412 aa23.98■■□□□ 1.43
POLR2J3-207ENST00000503564 KIF21BO75037 1637 aa23.97■■□□□ 1.43
POLR2J3-207ENST00000503564 EEA1Q15075 1411 aa23.96■■□□□ 1.43
POLR2J3-207ENST00000503564 HECW2Q9P2P5 1572 aa23.94■■□□□ 1.42
POLR2J3-207ENST00000503564 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
POLR2J3-207ENST00000503564 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
POLR2J3-207ENST00000503564 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
POLR2J3-207ENST00000503564 PHLDB1Q86UU1 1377 aa23.87■■□□□ 1.41
POLR2J3-207ENST00000503564 NEO1Q92859 1461 aa23.87■■□□□ 1.41
POLR2J3-207ENST00000503564 FRMPD1Q5SYB0 1578 aa23.85■■□□□ 1.41
POLR2J3-207ENST00000503564 EFCAB5A4FU69 1503 aa23.82■■□□□ 1.4
POLR2J3-207ENST00000503564 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
POLR2J3-207ENST00000503564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-207ENST00000503564 RANGAP1P46060 587 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-207ENST00000503564 HNRNPUL2Q1KMD3 747 aaKnown RBP23.77■■□□□ 1.4
POLR2J3-207ENST00000503564 RAPGEF3O95398 923 aa23.76■■□□□ 1.39
POLR2J3-207ENST00000503564 RICTORQ6R327 1708 aa23.73■■□□□ 1.39
POLR2J3-207ENST00000503564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.73■■□□□ 1.39
POLR2J3-207ENST00000503564 TTC37Q6PGP7 1564 aa23.73■■□□□ 1.39
POLR2J3-207ENST00000503564 BCORL1Q5H9F3 1711 aa23.73■■□□□ 1.39
POLR2J3-207ENST00000503564 ILDR1Q86SU0 546 aaPredicted RBP23.72■■□□□ 1.39
POLR2J3-207ENST00000503564 ARHGEF40Q8TER5 1519 aa23.72■■□□□ 1.39
POLR2J3-207ENST00000503564 CFAP74Q9C0B2 1584 aa23.71■■□□□ 1.39
POLR2J3-207ENST00000503564 PTPRMP28827 1452 aa23.69■■□□□ 1.38
POLR2J3-207ENST00000503564 CDK13Q14004 1512 aaKnown RBP23.68■■□□□ 1.38
POLR2J3-207ENST00000503564 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
POLR2J3-207ENST00000503564 PLEKHD1A6NEE1 506 aa23.67■■□□□ 1.38
POLR2J3-207ENST00000503564 FANCAO15360 1455 aa23.67■■□□□ 1.38
POLR2J3-207ENST00000503564 DENND4BO75064 1496 aaPredicted RBP23.67■■□□□ 1.38
POLR2J3-207ENST00000503564 AKNAQ7Z591 1439 aa23.66■■□□□ 1.38
POLR2J3-207ENST00000503564 ZMYM4Q5VZL5 1548 aa23.64■■□□□ 1.38
POLR2J3-207ENST00000503564 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
POLR2J3-207ENST00000503564 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
POLR2J3-207ENST00000503564 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
POLR2J3-207ENST00000503564 RIMS1Q86UR5 1692 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-207ENST00000503564 ZFYVE16Q7Z3T8 1539 aa23.56■■□□□ 1.36
POLR2J3-207ENST00000503564 FMN1Q68DA7 1419 aa23.56■■□□□ 1.36
POLR2J3-207ENST00000503564 PLCH2O75038 1416 aa23.54■■□□□ 1.36
POLR2J3-207ENST00000503564 ARID4BQ4LE39 1312 aaPredicted RBP23.54■■□□□ 1.36
POLR2J3-207ENST00000503564 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
POLR2J3-207ENST00000503564 PCF11O94913 1555 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-207ENST00000503564 YEATS2Q9ULM3 1422 aa23.53■■□□□ 1.36
POLR2J3-207ENST00000503564 MAGI2Q86UL8 1455 aa23.52■■□□□ 1.36
POLR2J3-207ENST00000503564 POGZQ7Z3K3 1410 aa23.51■■□□□ 1.35
POLR2J3-207ENST00000503564 LRRIQ1Q96JM4 1722 aa23.51■■□□□ 1.35
POLR2J3-207ENST00000503564 KIF14Q15058 1648 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms