RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
POLR2J3-207ENST00000503564 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
POLR2J3-207ENST00000503564 ABCC9O60706 1549 aa32.26■■■□□ 2.76
POLR2J3-207ENST00000503564 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
POLR2J3-207ENST00000503564 NACADO15069 1562 aa30.49■■■□□ 2.47
POLR2J3-207ENST00000503564 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
POLR2J3-207ENST00000503564 UNC13AQ9UPW8 1703 aa30.11■■■□□ 2.41
POLR2J3-207ENST00000503564 DCAF8L2P0C7V8 631 aa30.1■■■□□ 2.41
POLR2J3-207ENST00000503564 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
POLR2J3-207ENST00000503564 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
POLR2J3-207ENST00000503564 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
POLR2J3-207ENST00000503564 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
POLR2J3-207ENST00000503564 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
POLR2J3-207ENST00000503564 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
POLR2J3-207ENST00000503564 SCRIBQ14160 1630 aa29.36■■■□□ 2.29
POLR2J3-207ENST00000503564 CC2D2AQ9P2K1 1620 aa29.19■■■□□ 2.26
POLR2J3-207ENST00000503564 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
POLR2J3-207ENST00000503564 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
POLR2J3-207ENST00000503564 NCAPD3P42695 1498 aa28.13■■■□□ 2.09
POLR2J3-207ENST00000503564 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
POLR2J3-207ENST00000503564 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
POLR2J3-207ENST00000503564 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
POLR2J3-207ENST00000503564 HMGXB3Q12766 1538 aa27.96■■■□□ 2.07
POLR2J3-207ENST00000503564 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
POLR2J3-207ENST00000503564 CUX2O14529 1486 aa27.87■■■□□ 2.05
POLR2J3-207ENST00000503564 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
POLR2J3-207ENST00000503564 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
POLR2J3-207ENST00000503564 PEG3Q9GZU2 1588 aa27.78■■■□□ 2.04
POLR2J3-207ENST00000503564 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
POLR2J3-207ENST00000503564 NESP48681 1621 aa27.71■■■□□ 2.03
POLR2J3-207ENST00000503564 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
POLR2J3-207ENST00000503564 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
POLR2J3-207ENST00000503564 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
POLR2J3-207ENST00000503564 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
POLR2J3-207ENST00000503564 WIZO95785 1651 aa27.32■■□□□ 1.96
POLR2J3-207ENST00000503564 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
POLR2J3-207ENST00000503564 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
POLR2J3-207ENST00000503564 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
POLR2J3-207ENST00000503564 WDR62O43379 1518 aa27.11■■□□□ 1.93
POLR2J3-207ENST00000503564 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
POLR2J3-207ENST00000503564 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
POLR2J3-207ENST00000503564 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
POLR2J3-207ENST00000503564 CFTRP13569 1480 aa26.95■■□□□ 1.91
POLR2J3-207ENST00000503564 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
POLR2J3-207ENST00000503564 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
POLR2J3-207ENST00000503564 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
POLR2J3-207ENST00000503564 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
POLR2J3-207ENST00000503564 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
POLR2J3-207ENST00000503564 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
POLR2J3-207ENST00000503564 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
POLR2J3-207ENST00000503564 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
POLR2J3-207ENST00000503564 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
POLR2J3-207ENST00000503564 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
POLR2J3-207ENST00000503564 ABCC8Q09428 1581 aa26.35■■□□□ 1.81
POLR2J3-207ENST00000503564 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.8
POLR2J3-207ENST00000503564 RIMBP3CA6NJZ7 1639 aa26.27■■□□□ 1.8
POLR2J3-207ENST00000503564 RIMBP3BA6NNM3 1639 aa26.27■■□□□ 1.8
POLR2J3-207ENST00000503564 RIMBP3Q9UFD9 1639 aa26.27■■□□□ 1.8
POLR2J3-207ENST00000503564 TARBP1Q13395 1621 aaKnown RBP26.26■■□□□ 1.79
POLR2J3-207ENST00000503564 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
POLR2J3-207ENST00000503564 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
POLR2J3-207ENST00000503564 CHD1O14646 1710 aa26.16■■□□□ 1.78
POLR2J3-207ENST00000503564 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.78
POLR2J3-207ENST00000503564 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
POLR2J3-207ENST00000503564 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
POLR2J3-207ENST00000503564 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
POLR2J3-207ENST00000503564 SOGA1O94964 1423 aa25.99■■□□□ 1.75
POLR2J3-207ENST00000503564 CUX1P39880 1505 aa25.98■■□□□ 1.75
POLR2J3-207ENST00000503564 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
POLR2J3-207ENST00000503564 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
POLR2J3-207ENST00000503564 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
POLR2J3-207ENST00000503564 FBLN2P98095 1184 aa25.88■■□□□ 1.73
POLR2J3-207ENST00000503564 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
POLR2J3-207ENST00000503564 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
POLR2J3-207ENST00000503564 MAGI1Q96QZ7 1491 aaPredicted RBP25.85■■□□□ 1.73
POLR2J3-207ENST00000503564 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
POLR2J3-207ENST00000503564 PBRM1Q86U86 1689 aa25.79■■□□□ 1.72
POLR2J3-207ENST00000503564 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
POLR2J3-207ENST00000503564 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
POLR2J3-207ENST00000503564 ABCA5Q8WWZ7 1642 aa25.73■■□□□ 1.71
POLR2J3-207ENST00000503564 ABCA10Q8WWZ4 1543 aa25.71■■□□□ 1.71
POLR2J3-207ENST00000503564 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
POLR2J3-207ENST00000503564 CHMP7Q8WUX9 453 aaPredicted RBP25.7■■□□□ 1.7
POLR2J3-207ENST00000503564 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
POLR2J3-207ENST00000503564 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.69
POLR2J3-207ENST00000503564 TRHP20396 242 aaPredicted RBP25.55■■□□□ 1.68
POLR2J3-207ENST00000503564 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
POLR2J3-207ENST00000503564 ADAMTS12P58397 1594 aa25.53■■□□□ 1.68
POLR2J3-207ENST00000503564 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
POLR2J3-207ENST00000503564 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
POLR2J3-207ENST00000503564 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
POLR2J3-207ENST00000503564 NUP160Q12769 1436 aa25.44■■□□□ 1.66
POLR2J3-207ENST00000503564 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
POLR2J3-207ENST00000503564 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
POLR2J3-207ENST00000503564 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
POLR2J3-207ENST00000503564 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
POLR2J3-207ENST00000503564 RUSC2Q8N2Y8 1516 aa25.18■■□□□ 1.62
POLR2J3-207ENST00000503564 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
POLR2J3-207ENST00000503564 KIF13AQ9H1H9 1805 aa25.08■■□□□ 1.61
POLR2J3-207ENST00000503564 JPH4Q96JJ6 628 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms