RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 JPH4Q96JJ6 628 aa29.94■■■□□ 2.38
UBE2D3-213ENST00000502690 KIF27Q86VH2 1401 aa29.92■■■□□ 2.38
UBE2D3-213ENST00000502690 KIF13AQ9H1H9 1805 aa29.89■■■□□ 2.38
UBE2D3-213ENST00000502690 KIAA0586Q9BVV6 1533 aa29.82■■■□□ 2.36
UBE2D3-213ENST00000502690 ADCY10Q96PN6 1610 aa29.79■■■□□ 2.36
UBE2D3-213ENST00000502690 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
UBE2D3-213ENST00000502690 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
UBE2D3-213ENST00000502690 DIP2BQ9P265 1576 aa29.62■■■□□ 2.33
UBE2D3-213ENST00000502690 IQGAP2Q13576 1575 aa29.61■■■□□ 2.33
UBE2D3-213ENST00000502690 ABCC10Q5T3U5 1492 aa29.61■■■□□ 2.33
UBE2D3-213ENST00000502690 FAM69CQ0P6D2 419 aa29.51■■■□□ 2.31
UBE2D3-213ENST00000502690 PTPRGP23470 1445 aa29.51■■■□□ 2.31
UBE2D3-213ENST00000502690 NPM1P06748 294 aaKnown RBP eCLIP29.5■■■□□ 2.31
UBE2D3-213ENST00000502690 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
UBE2D3-213ENST00000502690 DISP1Q96F81 1524 aa29.49■■■□□ 2.31
UBE2D3-213ENST00000502690 TSPOAP1O95153 1857 aa29.48■■■□□ 2.31
UBE2D3-213ENST00000502690 RAPGEF2Q9Y4G8 1499 aa29.48■■■□□ 2.31
UBE2D3-213ENST00000502690 TNIKQ9UKE5 1360 aa29.46■■■□□ 2.31
UBE2D3-213ENST00000502690 CARMIL2Q6F5E8 1435 aa29.45■■■□□ 2.31
UBE2D3-213ENST00000502690 ABCC2Q92887 1545 aa29.4■■■□□ 2.3
UBE2D3-213ENST00000502690 UGGT2Q9NYU1 1516 aa29.4■■■□□ 2.3
UBE2D3-213ENST00000502690 CTTNBP2Q8WZ74 1663 aa29.38■■■□□ 2.29
UBE2D3-213ENST00000502690 KIAA0556O60303 1618 aa29.38■■■□□ 2.29
UBE2D3-213ENST00000502690 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
UBE2D3-213ENST00000502690 UHRF1BP1LA0JNW5 1464 aa29.34■■■□□ 2.29
UBE2D3-213ENST00000502690 KDM6BO15054 1643 aa29.31■■■□□ 2.28
UBE2D3-213ENST00000502690 UACAQ9BZF9 1416 aa29.31■■■□□ 2.28
UBE2D3-213ENST00000502690 PPRC1Q5VV67 1664 aaKnown RBP29.31■■■□□ 2.28
UBE2D3-213ENST00000502690 ASXL2Q76L83 1435 aa29.3■■■□□ 2.28
UBE2D3-213ENST00000502690 ZCCHC11Q5TAX3 1644 aaKnown RBP29.27■■■□□ 2.28
UBE2D3-213ENST00000502690 KDM5BQ9UGL1 1544 aa29.24■■■□□ 2.27
UBE2D3-213ENST00000502690 GLI2P10070 1586 aa29.23■■■□□ 2.27
UBE2D3-213ENST00000502690 PRXQ9BXM0 1461 aa29.23■■■□□ 2.27
UBE2D3-213ENST00000502690 PLB1Q6P1J6 1458 aa29.22■■■□□ 2.27
UBE2D3-213ENST00000502690 MAP3K4Q9Y6R4 1608 aa29.15■■■□□ 2.26
UBE2D3-213ENST00000502690 EPRSP07814 1512 aaKnown RBP29.14■■■□□ 2.25
UBE2D3-213ENST00000502690 ABCA8O94911 1581 aa29.09■■■□□ 2.25
UBE2D3-213ENST00000502690 GOLGA3Q08378 1498 aa29.07■■■□□ 2.24
UBE2D3-213ENST00000502690 COL17A1Q9UMD9 1497 aaPredicted RBP29.03■■■□□ 2.24
UBE2D3-213ENST00000502690 WDR7Q9Y4E6 1490 aa29.03■■■□□ 2.24
UBE2D3-213ENST00000502690 KDM4FA0A1W2PPD8 638 aa28.97■■■□□ 2.23
UBE2D3-213ENST00000502690 SAMD9Q5K651 1589 aa28.93■■■□□ 2.22
UBE2D3-213ENST00000502690 TEX14Q8IWB6 1497 aa28.91■■■□□ 2.22
UBE2D3-213ENST00000502690 CFAP43Q8NDM7 1665 aa28.9■■■□□ 2.22
UBE2D3-213ENST00000502690 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
UBE2D3-213ENST00000502690 P3H3Q8IVL6 736 aa28.89■■■□□ 2.22
UBE2D3-213ENST00000502690 ARID3CA6NKF2 412 aa28.83■■■□□ 2.21
UBE2D3-213ENST00000502690 KCNH8Q96L42 1107 aa28.81■■■□□ 2.2
UBE2D3-213ENST00000502690 MAGI3Q5TCQ9 1506 aa28.8■■■□□ 2.2
UBE2D3-213ENST00000502690 ATP10BO94823 1461 aa28.8■■■□□ 2.2
UBE2D3-213ENST00000502690 CD109Q6YHK3 1445 aa28.79■■■□□ 2.2
UBE2D3-213ENST00000502690 RAPGEF6Q8TEU7 1601 aa28.79■■■□□ 2.2
UBE2D3-213ENST00000502690 ADGRL1O94910 1474 aa28.78■■■□□ 2.2
UBE2D3-213ENST00000502690 EEA1Q15075 1411 aa28.77■■■□□ 2.2
UBE2D3-213ENST00000502690 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
UBE2D3-213ENST00000502690 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
UBE2D3-213ENST00000502690 KIF21BO75037 1637 aa28.7■■■□□ 2.19
UBE2D3-213ENST00000502690 ABCA9Q8IUA7 1624 aa28.69■■■□□ 2.18
UBE2D3-213ENST00000502690 RANGAP1P46060 587 aaPredicted RBP28.69■■■□□ 2.18
UBE2D3-213ENST00000502690 NUP153P49790 1475 aaKnown RBP28.68■■■□□ 2.18
UBE2D3-213ENST00000502690 ARAP3Q8WWN8 1544 aa28.59■■■□□ 2.17
UBE2D3-213ENST00000502690 EFCAB5A4FU69 1503 aa28.56■■■□□ 2.16
UBE2D3-213ENST00000502690 FRMPD1Q5SYB0 1578 aa28.5■■■□□ 2.15
UBE2D3-213ENST00000502690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.5■■■□□ 2.15
UBE2D3-213ENST00000502690 HNRNPUL2Q1KMD3 747 aaKnown RBP28.5■■■□□ 2.15
UBE2D3-213ENST00000502690 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
UBE2D3-213ENST00000502690 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
UBE2D3-213ENST00000502690 NEO1Q92859 1461 aa28.45■■■□□ 2.14
UBE2D3-213ENST00000502690 CDK13Q14004 1512 aaKnown RBP28.44■■■□□ 2.14
UBE2D3-213ENST00000502690 TTC37Q6PGP7 1564 aa28.43■■■□□ 2.14
UBE2D3-213ENST00000502690 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
UBE2D3-213ENST00000502690 RAPGEF3O95398 923 aa28.41■■■□□ 2.14
UBE2D3-213ENST00000502690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.41■■■□□ 2.146e-33■□□□□ 10.7
UBE2D3-213ENST00000502690 PHLDB1Q86UU1 1377 aa28.38■■■□□ 2.13
UBE2D3-213ENST00000502690 RICTORQ6R327 1708 aa28.38■■■□□ 2.13
UBE2D3-213ENST00000502690 ARHGAP35Q9NRY4 1499 aa28.37■■■□□ 2.13
UBE2D3-213ENST00000502690 ADAMTSL3P82987 1691 aa28.33■■■□□ 2.13
UBE2D3-213ENST00000502690 PLEKHD1A6NEE1 506 aa28.33■■■□□ 2.13
UBE2D3-213ENST00000502690 UBTFP17480 764 aaKnown RBP28.33■■■□□ 2.13
UBE2D3-213ENST00000502690 LRRIQ1Q96JM4 1722 aa28.32■■■□□ 2.12
UBE2D3-213ENST00000502690 HECW1Q76N89 1606 aa28.3■■■□□ 2.12
UBE2D3-213ENST00000502690 CFAP74Q9C0B2 1584 aa28.3■■■□□ 2.12
UBE2D3-213ENST00000502690 FANCAO15360 1455 aa28.29■■■□□ 2.12
UBE2D3-213ENST00000502690 ARHGEF40Q8TER5 1519 aa28.28■■■□□ 2.12
UBE2D3-213ENST00000502690 BCORL1Q5H9F3 1711 aa28.28■■■□□ 2.12
UBE2D3-213ENST00000502690 AKNAQ7Z591 1439 aa28.27■■■□□ 2.12
UBE2D3-213ENST00000502690 SIGLEC1Q9BZZ2 1709 aa28.25■■■□□ 2.11
UBE2D3-213ENST00000502690 DENND4BO75064 1496 aaPredicted RBP28.24■■■□□ 2.11
UBE2D3-213ENST00000502690 FMN1Q68DA7 1419 aa28.24■■■□□ 2.11
UBE2D3-213ENST00000502690 KIF14Q15058 1648 aa28.23■■■□□ 2.11
UBE2D3-213ENST00000502690 MADDQ8WXG6 1647 aa28.22■■■□□ 2.11
UBE2D3-213ENST00000502690 ZMYM4Q5VZL5 1548 aa28.19■■■□□ 2.1
UBE2D3-213ENST00000502690 MYO5CQ9NQX4 1742 aa28.19■■■□□ 2.1
UBE2D3-213ENST00000502690 PTPRMP28827 1452 aa28.19■■■□□ 2.1
UBE2D3-213ENST00000502690 ATP1B4Q9UN42 357 aaPredicted RBP28.16■■■□□ 2.1
UBE2D3-213ENST00000502690 PLCH2O75038 1416 aa28.14■■■□□ 2.1
UBE2D3-213ENST00000502690 YEATS2Q9ULM3 1422 aa28.14■■■□□ 2.1
UBE2D3-213ENST00000502690 RIMS1Q86UR5 1692 aaKnown RBP28.13■■■□□ 2.09
UBE2D3-213ENST00000502690 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
UBE2D3-213ENST00000502690 PCF11O94913 1555 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms