RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
CDK7-202ENST00000502604 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
CDK7-202ENST00000502604 CUL7Q14999 1698 aa20.63■□□□□ 0.89
CDK7-202ENST00000502604 IGF1RP08069 1367 aa20.6■□□□□ 0.89
CDK7-202ENST00000502604 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
CDK7-202ENST00000502604 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
CDK7-202ENST00000502604 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
CDK7-202ENST00000502604 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
CDK7-202ENST00000502604 KIF13AQ9H1H9 1805 aa20.41■□□□□ 0.86
CDK7-202ENST00000502604 ADCY10Q96PN6 1610 aa20.39■□□□□ 0.86
CDK7-202ENST00000502604 FOXD1Q16676 465 aa20.39■□□□□ 0.85
CDK7-202ENST00000502604 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
CDK7-202ENST00000502604 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
CDK7-202ENST00000502604 MAPKBP1O60336 1514 aa20.3■□□□□ 0.84
CDK7-202ENST00000502604 CARMIL2Q6F5E8 1435 aa20.27■□□□□ 0.84
CDK7-202ENST00000502604 PTPRGP23470 1445 aa20.26■□□□□ 0.83
CDK7-202ENST00000502604 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
CDK7-202ENST00000502604 NPM1P06748 294 aaKnown RBP eCLIP20.25■□□□□ 0.83
CDK7-202ENST00000502604 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
CDK7-202ENST00000502604 DISP1Q96F81 1524 aa20.25■□□□□ 0.83
CDK7-202ENST00000502604 CTTNBP2Q8WZ74 1663 aa20.25■□□□□ 0.83
CDK7-202ENST00000502604 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
CDK7-202ENST00000502604 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
CDK7-202ENST00000502604 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
CDK7-202ENST00000502604 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
CDK7-202ENST00000502604 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
CDK7-202ENST00000502604 TSPOAP1O95153 1857 aa20.17■□□□□ 0.82
CDK7-202ENST00000502604 ABCC2Q92887 1545 aa20.16■□□□□ 0.82
CDK7-202ENST00000502604 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
CDK7-202ENST00000502604 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
CDK7-202ENST00000502604 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
CDK7-202ENST00000502604 ASXL2Q76L83 1435 aa20.08■□□□□ 0.8
CDK7-202ENST00000502604 ZCCHC11Q5TAX3 1644 aaKnown RBP20.08■□□□□ 0.8
CDK7-202ENST00000502604 KDM5BQ9UGL1 1544 aa20.05■□□□□ 0.8
CDK7-202ENST00000502604 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
CDK7-202ENST00000502604 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
CDK7-202ENST00000502604 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.8
CDK7-202ENST00000502604 KDM6BO15054 1643 aa20.02■□□□□ 0.8
CDK7-202ENST00000502604 GLI2P10070 1586 aa20.01■□□□□ 0.79
CDK7-202ENST00000502604 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
CDK7-202ENST00000502604 ABCA8O94911 1581 aa19.98■□□□□ 0.79
CDK7-202ENST00000502604 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
CDK7-202ENST00000502604 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
CDK7-202ENST00000502604 MAP3K4Q9Y6R4 1608 aa19.96■□□□□ 0.79
CDK7-202ENST00000502604 EEA1Q15075 1411 aa19.94■□□□□ 0.78
CDK7-202ENST00000502604 SAMD9Q5K651 1589 aa19.92■□□□□ 0.78
CDK7-202ENST00000502604 WDR7Q9Y4E6 1490 aa19.91■□□□□ 0.78
CDK7-202ENST00000502604 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
CDK7-202ENST00000502604 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
CDK7-202ENST00000502604 KIF21BO75037 1637 aa19.84■□□□□ 0.77
CDK7-202ENST00000502604 POTEDQ86YR6 584 aa19.83■□□□□ 0.76
CDK7-202ENST00000502604 CFAP43Q8NDM7 1665 aa19.83■□□□□ 0.76
CDK7-202ENST00000502604 TEX14Q8IWB6 1497 aa19.82■□□□□ 0.76
CDK7-202ENST00000502604 COL17A1Q9UMD9 1497 aaPredicted RBP19.82■□□□□ 0.76
CDK7-202ENST00000502604 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
CDK7-202ENST00000502604 RAPGEF6Q8TEU7 1601 aa19.81■□□□□ 0.76
CDK7-202ENST00000502604 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
CDK7-202ENST00000502604 ATP10BO94823 1461 aa19.79■□□□□ 0.76
CDK7-202ENST00000502604 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
CDK7-202ENST00000502604 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.76
CDK7-202ENST00000502604 CD109Q6YHK3 1445 aa19.75■□□□□ 0.75
CDK7-202ENST00000502604 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
CDK7-202ENST00000502604 NUP153P49790 1475 aaKnown RBP19.72■□□□□ 0.75
CDK7-202ENST00000502604 KDM4FA0A1W2PPD8 638 aa19.72■□□□□ 0.75
CDK7-202ENST00000502604 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
CDK7-202ENST00000502604 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
CDK7-202ENST00000502604 ABCA9Q8IUA7 1624 aa19.7■□□□□ 0.74
CDK7-202ENST00000502604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.64■□□□□ 0.73
CDK7-202ENST00000502604 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
CDK7-202ENST00000502604 ADGRL1O94910 1474 aa19.63■□□□□ 0.73
CDK7-202ENST00000502604 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
CDK7-202ENST00000502604 ARAP3Q8WWN8 1544 aa19.59■□□□□ 0.73
CDK7-202ENST00000502604 CDK13Q14004 1512 aaKnown RBP19.57■□□□□ 0.72
CDK7-202ENST00000502604 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
CDK7-202ENST00000502604 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
CDK7-202ENST00000502604 NEO1Q92859 1461 aa19.52■□□□□ 0.72
CDK7-202ENST00000502604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDK7-202ENST00000502604 HECW1Q76N89 1606 aa19.52■□□□□ 0.72
CDK7-202ENST00000502604 PLEKHD1A6NEE1 506 aa19.52■□□□□ 0.72
CDK7-202ENST00000502604 FRMPD1Q5SYB0 1578 aa19.51■□□□□ 0.71
CDK7-202ENST00000502604 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
CDK7-202ENST00000502604 PHLDB1Q86UU1 1377 aa19.5■□□□□ 0.71
CDK7-202ENST00000502604 LRRIQ1Q96JM4 1722 aa19.49■□□□□ 0.71
CDK7-202ENST00000502604 RAPGEF3O95398 923 aa19.48■□□□□ 0.71
CDK7-202ENST00000502604 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
CDK7-202ENST00000502604 RICTORQ6R327 1708 aa19.45■□□□□ 0.7
CDK7-202ENST00000502604 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
CDK7-202ENST00000502604 FANCAO15360 1455 aa19.44■□□□□ 0.7
CDK7-202ENST00000502604 AKNAQ7Z591 1439 aa19.41■□□□□ 0.7
CDK7-202ENST00000502604 KIF14Q15058 1648 aa19.41■□□□□ 0.7
CDK7-202ENST00000502604 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
CDK7-202ENST00000502604 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
CDK7-202ENST00000502604 DENND4BO75064 1496 aaPredicted RBP19.39■□□□□ 0.69
CDK7-202ENST00000502604 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
CDK7-202ENST00000502604 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
CDK7-202ENST00000502604 ADAMTSL3P82987 1691 aa19.35■□□□□ 0.69
CDK7-202ENST00000502604 PLCH2O75038 1416 aa19.35■□□□□ 0.69
CDK7-202ENST00000502604 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
CDK7-202ENST00000502604 BCORL1Q5H9F3 1711 aa19.34■□□□□ 0.69
CDK7-202ENST00000502604 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms