RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 CUL7Q14999 1698 aa34.15■■■■□ 3.06
SFXN1-203ENST00000502393 RUSC2Q8N2Y8 1516 aa34.15■■■■□ 3.06
SFXN1-203ENST00000502393 KIAA0586Q9BVV6 1533 aa34.05■■■■□ 3.04
SFXN1-203ENST00000502393 CARMIL1Q5VZK9 1371 aa34.03■■■■□ 3.04
SFXN1-203ENST00000502393 NPM1P06748 294 aaKnown RBP eCLIP33.78■■■■□ 3
SFXN1-203ENST00000502393 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
SFXN1-203ENST00000502393 IQGAP2Q13576 1575 aa33.74■■■□□ 2.99
SFXN1-203ENST00000502393 ADCY10Q96PN6 1610 aa33.72■■■□□ 2.99
SFXN1-203ENST00000502393 CARMIL2Q6F5E8 1435 aa33.72■■■□□ 2.99
SFXN1-203ENST00000502393 PTPRGP23470 1445 aa33.69■■■□□ 2.98
SFXN1-203ENST00000502393 MAPKBP1O60336 1514 aa33.67■■■□□ 2.98
SFXN1-203ENST00000502393 TNIKQ9UKE5 1360 aa33.66■■■□□ 2.98
SFXN1-203ENST00000502393 KIF13AQ9H1H9 1805 aa33.65■■■□□ 2.98
SFXN1-203ENST00000502393 ABCC10Q5T3U5 1492 aa33.62■■■□□ 2.97
SFXN1-203ENST00000502393 FAM69CQ0P6D2 419 aa33.58■■■□□ 2.97
SFXN1-203ENST00000502393 TTBK1Q5TCY1 1321 aaPredicted RBP33.56■■■□□ 2.96
SFXN1-203ENST00000502393 DISP1Q96F81 1524 aa33.56■■■□□ 2.96
SFXN1-203ENST00000502393 UGGT2Q9NYU1 1516 aa33.55■■■□□ 2.96
SFXN1-203ENST00000502393 DIP2BQ9P265 1576 aa33.51■■■□□ 2.95
SFXN1-203ENST00000502393 ABCC2Q92887 1545 aa33.47■■■□□ 2.95
SFXN1-203ENST00000502393 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
SFXN1-203ENST00000502393 UHRF1BP1LA0JNW5 1464 aa33.45■■■□□ 2.95
SFXN1-203ENST00000502393 UACAQ9BZF9 1416 aa33.45■■■□□ 2.94
SFXN1-203ENST00000502393 KIAA0556O60303 1618 aa33.42■■■□□ 2.94
SFXN1-203ENST00000502393 CTTNBP2Q8WZ74 1663 aa33.41■■■□□ 2.94
SFXN1-203ENST00000502393 PLB1Q6P1J6 1458 aa33.33■■■□□ 2.93
SFXN1-203ENST00000502393 ASXL2Q76L83 1435 aa33.33■■■□□ 2.93
SFXN1-203ENST00000502393 GOLGA3Q08378 1498 aa33.32■■■□□ 2.92
SFXN1-203ENST00000502393 KDM5BQ9UGL1 1544 aa33.29■■■□□ 2.92
SFXN1-203ENST00000502393 CSRNP3Q8WYN3 585 aa33.28■■■□□ 2.92
SFXN1-203ENST00000502393 GLI2P10070 1586 aa33.21■■■□□ 2.91
SFXN1-203ENST00000502393 AEBP2Q6ZN18 517 aaPredicted RBP33.21■■■□□ 2.91
SFXN1-203ENST00000502393 TSPOAP1O95153 1857 aa33.2■■■□□ 2.91
SFXN1-203ENST00000502393 EEA1Q15075 1411 aa33.19■■■□□ 2.9
SFXN1-203ENST00000502393 ZCCHC11Q5TAX3 1644 aaKnown RBP33.19■■■□□ 2.9
SFXN1-203ENST00000502393 KDM6BO15054 1643 aa33.15■■■□□ 2.9
SFXN1-203ENST00000502393 EPRSP07814 1512 aaKnown RBP33.12■■■□□ 2.89
SFXN1-203ENST00000502393 ABCA8O94911 1581 aa33.1■■■□□ 2.89
SFXN1-203ENST00000502393 FAM9AQ8IZU1 332 aaPredicted RBP33.07■■■□□ 2.88
SFXN1-203ENST00000502393 WDR7Q9Y4E6 1490 aa33.05■■■□□ 2.88
SFXN1-203ENST00000502393 PPRC1Q5VV67 1664 aaKnown RBP33.04■■■□□ 2.88
SFXN1-203ENST00000502393 MAP3K4Q9Y6R4 1608 aa33.02■■■□□ 2.88
SFXN1-203ENST00000502393 P3H3Q8IVL6 736 aa33■■■□□ 2.87
SFXN1-203ENST00000502393 SAMD9Q5K651 1589 aa32.97■■■□□ 2.87
SFXN1-203ENST00000502393 TEX14Q8IWB6 1497 aa32.95■■■□□ 2.87
SFXN1-203ENST00000502393 KCNH8Q96L42 1107 aa32.88■■■□□ 2.85
SFXN1-203ENST00000502393 KIF21BO75037 1637 aa32.87■■■□□ 2.85
SFXN1-203ENST00000502393 CHIC1Q5VXU3 224 aa32.86■■■□□ 2.85
SFXN1-203ENST00000502393 ATP10BO94823 1461 aa32.85■■■□□ 2.85
SFXN1-203ENST00000502393 COL17A1Q9UMD9 1497 aaPredicted RBP32.83■■■□□ 2.85
SFXN1-203ENST00000502393 CD109Q6YHK3 1445 aa32.83■■■□□ 2.85
SFXN1-203ENST00000502393 CFAP43Q8NDM7 1665 aa32.82■■■□□ 2.84
SFXN1-203ENST00000502393 RANGAP1P46060 587 aaPredicted RBP32.81■■■□□ 2.84
SFXN1-203ENST00000502393 ARID3CA6NKF2 412 aa32.8■■■□□ 2.84
SFXN1-203ENST00000502393 MAGI3Q5TCQ9 1506 aa32.8■■■□□ 2.84
SFXN1-203ENST00000502393 RAPGEF6Q8TEU7 1601 aa32.79■■■□□ 2.84
SFXN1-203ENST00000502393 FHOD3Q2V2M9 1422 aa32.75■■■□□ 2.83
SFXN1-203ENST00000502393 KDM4FA0A1W2PPD8 638 aa32.73■■■□□ 2.83
SFXN1-203ENST00000502393 EFCAB5A4FU69 1503 aa32.72■■■□□ 2.83
SFXN1-203ENST00000502393 NUP153P49790 1475 aaKnown RBP32.68■■■□□ 2.82
SFXN1-203ENST00000502393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.67■■■□□ 2.82
SFXN1-203ENST00000502393 HNRNPUL2Q1KMD3 747 aaKnown RBP32.67■■■□□ 2.82
SFXN1-203ENST00000502393 UBTFP17480 764 aaKnown RBP32.64■■■□□ 2.82
SFXN1-203ENST00000502393 ABCA9Q8IUA7 1624 aa32.62■■■□□ 2.81
SFXN1-203ENST00000502393 EHMT2Q96KQ7 1210 aa32.58■■■□□ 2.81
SFXN1-203ENST00000502393 PLEKHD1A6NEE1 506 aa32.54■■■□□ 2.8
SFXN1-203ENST00000502393 ARAP3Q8WWN8 1544 aa32.54■■■□□ 2.8
SFXN1-203ENST00000502393 PHLDB1Q86UU1 1377 aa32.54■■■□□ 2.8
SFXN1-203ENST00000502393 ADGRL1O94910 1474 aa32.51■■■□□ 2.79
SFXN1-203ENST00000502393 NEO1Q92859 1461 aa32.46■■■□□ 2.79
SFXN1-203ENST00000502393 FMN1Q68DA7 1419 aa32.44■■■□□ 2.78
SFXN1-203ENST00000502393 ARHGAP35Q9NRY4 1499 aa32.44■■■□□ 2.78
SFXN1-203ENST00000502393 CDK13Q14004 1512 aaKnown RBP32.36■■■□□ 2.77
SFXN1-203ENST00000502393 RAPGEF3O95398 923 aa32.34■■■□□ 2.77
SFXN1-203ENST00000502393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.34■■■□□ 2.77
SFXN1-203ENST00000502393 HECW1Q76N89 1606 aa32.33■■■□□ 2.77
SFXN1-203ENST00000502393 ATP1B4Q9UN42 357 aaPredicted RBP32.32■■■□□ 2.76
SFXN1-203ENST00000502393 CDK11AQ9UQ88 783 aaPredicted RBP32.26■■■□□ 2.75
SFXN1-203ENST00000502393 FANCAO15360 1455 aa32.26■■■□□ 2.75
SFXN1-203ENST00000502393 TTC37Q6PGP7 1564 aa32.26■■■□□ 2.75
SFXN1-203ENST00000502393 CFAP74Q9C0B2 1584 aa32.25■■■□□ 2.75
SFXN1-203ENST00000502393 AKNAQ7Z591 1439 aa32.25■■■□□ 2.75
SFXN1-203ENST00000502393 FRMPD1Q5SYB0 1578 aa32.23■■■□□ 2.75
SFXN1-203ENST00000502393 DENND4BO75064 1496 aaPredicted RBP32.21■■■□□ 2.75
SFXN1-203ENST00000502393 PLCH2O75038 1416 aa32.17■■■□□ 2.74
SFXN1-203ENST00000502393 RICTORQ6R327 1708 aa32.14■■■□□ 2.74
SFXN1-203ENST00000502393 TROQ12816 1431 aaPredicted RBP32.12■■■□□ 2.73
SFXN1-203ENST00000502393 CASKIN1Q8WXD9 1431 aa32.1■■■□□ 2.73
SFXN1-203ENST00000502393 CLIP1P30622 1438 aa32.09■■■□□ 2.73
SFXN1-203ENST00000502393 LRRIQ1Q96JM4 1722 aa32.08■■■□□ 2.73
SFXN1-203ENST00000502393 KIF14Q15058 1648 aa32.08■■■□□ 2.73
SFXN1-203ENST00000502393 ARHGEF40Q8TER5 1519 aa32.06■■■□□ 2.72
SFXN1-203ENST00000502393 EFCAB2Q5VUJ9 269 aa32.06■■■□□ 2.72
SFXN1-203ENST00000502393 CCDC18Q5T9S5 1454 aa32.05■■■□□ 2.72
SFXN1-203ENST00000502393 MYO5CQ9NQX4 1742 aa32.05■■■□□ 2.72
SFXN1-203ENST00000502393 ZMYM4Q5VZL5 1548 aa32.05■■■□□ 2.72
SFXN1-203ENST00000502393 PCF11O94913 1555 aaKnown RBP32.04■■■□□ 2.72
SFXN1-203ENST00000502393 SCAPERQ9BY12 1400 aa32.04■■■□□ 2.72
SFXN1-203ENST00000502393 ARID4BQ4LE39 1312 aaPredicted RBP32.03■■■□□ 2.72
SFXN1-203ENST00000502393 ADAMTSL3P82987 1691 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms