RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 RAPGEF2Q9Y4G8 1499 aa14.22□□□□□ -0.13
TUBA4A-210ENST00000498660 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
TUBA4A-210ENST00000498660 IGF1RP08069 1367 aa14.2□□□□□ -0.14
TUBA4A-210ENST00000498660 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
TUBA4A-210ENST00000498660 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
TUBA4A-210ENST00000498660 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
TUBA4A-210ENST00000498660 UBTFP17480 764 aaKnown RBP14.13□□□□□ -0.15
TUBA4A-210ENST00000498660 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
TUBA4A-210ENST00000498660 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
TUBA4A-210ENST00000498660 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
TUBA4A-210ENST00000498660 NUP160Q12769 1436 aa14.1□□□□□ -0.15
TUBA4A-210ENST00000498660 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
TUBA4A-210ENST00000498660 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
TUBA4A-210ENST00000498660 AEBP2Q6ZN18 517 aaPredicted RBP14.08□□□□□ -0.16
TUBA4A-210ENST00000498660 CEP170Q5SW79 1584 aa14.07□□□□□ -0.16
TUBA4A-210ENST00000498660 CLIP1P30622 1438 aa14.05□□□□□ -0.16
TUBA4A-210ENST00000498660 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
TUBA4A-210ENST00000498660 EFCAB5A4FU69 1503 aa13.99□□□□□ -0.17
TUBA4A-210ENST00000498660 PRG4Q92954 1404 aaPredicted RBP13.97□□□□□ -0.17
TUBA4A-210ENST00000498660 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
TUBA4A-210ENST00000498660 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
TUBA4A-210ENST00000498660 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
TUBA4A-210ENST00000498660 SAMD9Q5K651 1589 aa13.93□□□□□ -0.18
TUBA4A-210ENST00000498660 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
TUBA4A-210ENST00000498660 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
TUBA4A-210ENST00000498660 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
TUBA4A-210ENST00000498660 KIAA0586Q9BVV6 1533 aa13.89□□□□□ -0.19
TUBA4A-210ENST00000498660 UGGT2Q9NYU1 1516 aa13.87□□□□□ -0.19
TUBA4A-210ENST00000498660 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBA4A-210ENST00000498660 ABCC10Q5T3U5 1492 aa13.87□□□□□ -0.19
TUBA4A-210ENST00000498660 FAM69CQ0P6D2 419 aa13.86□□□□□ -0.19
TUBA4A-210ENST00000498660 MAPKBP1O60336 1514 aa13.85□□□□□ -0.19
TUBA4A-210ENST00000498660 KIAA0556O60303 1618 aa13.83□□□□□ -0.2
TUBA4A-210ENST00000498660 FHOD3Q2V2M9 1422 aa13.82□□□□□ -0.2
TUBA4A-210ENST00000498660 PCF11O94913 1555 aaKnown RBP13.82□□□□□ -0.2
TUBA4A-210ENST00000498660 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
TUBA4A-210ENST00000498660 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
TUBA4A-210ENST00000498660 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
TUBA4A-210ENST00000498660 FYCO1Q9BQS8 1478 aa13.79□□□□□ -0.2
TUBA4A-210ENST00000498660 CFAP43Q8NDM7 1665 aa13.78□□□□□ -0.2
TUBA4A-210ENST00000498660 DISP1Q96F81 1524 aa13.76□□□□□ -0.21
TUBA4A-210ENST00000498660 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
TUBA4A-210ENST00000498660 HECW1Q76N89 1606 aa13.74□□□□□ -0.21
TUBA4A-210ENST00000498660 PTPRGP23470 1445 aa13.73□□□□□ -0.21
TUBA4A-210ENST00000498660 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
TUBA4A-210ENST00000498660 APLP2Q06481 763 aa13.73□□□□□ -0.21
TUBA4A-210ENST00000498660 P3H3Q8IVL6 736 aa13.73□□□□□ -0.21
TUBA4A-210ENST00000498660 TIAM1Q13009 1591 aa13.73□□□□□ -0.21
TUBA4A-210ENST00000498660 MAP3K1Q13233 1512 aa13.73□□□□□ -0.21
TUBA4A-210ENST00000498660 KDM6BO15054 1643 aa13.72□□□□□ -0.21
TUBA4A-210ENST00000498660 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
TUBA4A-210ENST00000498660 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
TUBA4A-210ENST00000498660 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
TUBA4A-210ENST00000498660 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
TUBA4A-210ENST00000498660 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
TUBA4A-210ENST00000498660 CCDC18Q5T9S5 1454 aa13.67□□□□□ -0.22
TUBA4A-210ENST00000498660 UHRF1BP1LA0JNW5 1464 aa13.66□□□□□ -0.22
TUBA4A-210ENST00000498660 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
TUBA4A-210ENST00000498660 PLB1Q6P1J6 1458 aa13.65□□□□□ -0.22
TUBA4A-210ENST00000498660 ASXL2Q76L83 1435 aa13.64□□□□□ -0.23
TUBA4A-210ENST00000498660 GLI2P10070 1586 aa13.64□□□□□ -0.23
TUBA4A-210ENST00000498660 UACAQ9BZF9 1416 aa13.63□□□□□ -0.23
TUBA4A-210ENST00000498660 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
TUBA4A-210ENST00000498660 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
TUBA4A-210ENST00000498660 EHBP1L1Q8N3D4 1523 aa13.61□□□□□ -0.23
TUBA4A-210ENST00000498660 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
TUBA4A-210ENST00000498660 ABCA8O94911 1581 aa13.61□□□□□ -0.23
TUBA4A-210ENST00000498660 PPRC1Q5VV67 1664 aaKnown RBP13.6□□□□□ -0.23
TUBA4A-210ENST00000498660 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
TUBA4A-210ENST00000498660 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
TUBA4A-210ENST00000498660 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
TUBA4A-210ENST00000498660 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
TUBA4A-210ENST00000498660 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
TUBA4A-210ENST00000498660 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
TUBA4A-210ENST00000498660 COL17A1Q9UMD9 1497 aaPredicted RBP13.55□□□□□ -0.24
TUBA4A-210ENST00000498660 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
TUBA4A-210ENST00000498660 MTUS2Q5JR59 1369 aa13.54□□□□□ -0.24
TUBA4A-210ENST00000498660 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
TUBA4A-210ENST00000498660 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
TUBA4A-210ENST00000498660 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
TUBA4A-210ENST00000498660 ADGRL1O94910 1474 aa13.52□□□□□ -0.25
TUBA4A-210ENST00000498660 ZCCHC11Q5TAX3 1644 aaKnown RBP13.52□□□□□ -0.25
TUBA4A-210ENST00000498660 MAGI3Q5TCQ9 1506 aa13.51□□□□□ -0.25
TUBA4A-210ENST00000498660 WDR7Q9Y4E6 1490 aa13.48□□□□□ -0.25
TUBA4A-210ENST00000498660 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
TUBA4A-210ENST00000498660 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
TUBA4A-210ENST00000498660 KIF14Q15058 1648 aa13.46□□□□□ -0.26
TUBA4A-210ENST00000498660 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
TUBA4A-210ENST00000498660 CDK11AQ9UQ88 783 aaPredicted RBP13.45□□□□□ -0.26
TUBA4A-210ENST00000498660 TROQ12816 1431 aaPredicted RBP13.45□□□□□ -0.26
TUBA4A-210ENST00000498660 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
TUBA4A-210ENST00000498660 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
TUBA4A-210ENST00000498660 ATP10BO94823 1461 aa13.43□□□□□ -0.26
TUBA4A-210ENST00000498660 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
TUBA4A-210ENST00000498660 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
TUBA4A-210ENST00000498660 CCNB3Q8WWL7 1395 aa13.43□□□□□ -0.26
TUBA4A-210ENST00000498660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
TUBA4A-210ENST00000498660 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
TUBA4A-210ENST00000498660 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
TUBA4A-210ENST00000498660 MYOM3Q5VTT5 1437 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms