RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
MUC1-220ENST00000498431 ADCY10Q96PN6 1610 aa28.48■■■□□ 2.15
MUC1-220ENST00000498431 IGF1RP08069 1367 aa28.47■■■□□ 2.15
MUC1-220ENST00000498431 ABCC10Q5T3U5 1492 aa28.46■■■□□ 2.15
MUC1-220ENST00000498431 FAM69CQ0P6D2 419 aa28.45■■■□□ 2.14
MUC1-220ENST00000498431 MAPKBP1O60336 1514 aa28.44■■■□□ 2.14
MUC1-220ENST00000498431 KIAA0586Q9BVV6 1533 aa28.44■■■□□ 2.14
MUC1-220ENST00000498431 DIP2BQ9P265 1576 aa28.41■■■□□ 2.14
MUC1-220ENST00000498431 NPM1P06748 294 aaKnown RBP eCLIP28.41■■■□□ 2.14
MUC1-220ENST00000498431 CUL7Q14999 1698 aa28.4■■■□□ 2.14
MUC1-220ENST00000498431 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
MUC1-220ENST00000498431 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
MUC1-220ENST00000498431 TSPOAP1O95153 1857 aa28.25■■■□□ 2.11
MUC1-220ENST00000498431 PTPRGP23470 1445 aa28.23■■■□□ 2.11
MUC1-220ENST00000498431 KDM6BO15054 1643 aa28.22■■■□□ 2.11
MUC1-220ENST00000498431 TTBK1Q5TCY1 1321 aaPredicted RBP28.21■■■□□ 2.11
MUC1-220ENST00000498431 TNIKQ9UKE5 1360 aa28.15■■■□□ 2.1
MUC1-220ENST00000498431 IQGAP2Q13576 1575 aa28.15■■■□□ 2.1
MUC1-220ENST00000498431 ABCC2Q92887 1545 aa28.13■■■□□ 2.09
MUC1-220ENST00000498431 CARMIL2Q6F5E8 1435 aa28.13■■■□□ 2.09
MUC1-220ENST00000498431 KDM4FA0A1W2PPD8 638 aa28.09■■■□□ 2.09
MUC1-220ENST00000498431 ASXL2Q76L83 1435 aa28.08■■■□□ 2.09
MUC1-220ENST00000498431 DISP1Q96F81 1524 aa28.06■■■□□ 2.08
MUC1-220ENST00000498431 PPRC1Q5VV67 1664 aaKnown RBP28.04■■■□□ 2.08
MUC1-220ENST00000498431 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
MUC1-220ENST00000498431 PLB1Q6P1J6 1458 aa28.02■■■□□ 2.08
MUC1-220ENST00000498431 GLI2P10070 1586 aa28.01■■■□□ 2.07
MUC1-220ENST00000498431 UACAQ9BZF9 1416 aa28.01■■■□□ 2.07
MUC1-220ENST00000498431 UGGT2Q9NYU1 1516 aa27.96■■■□□ 2.07
MUC1-220ENST00000498431 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.07
MUC1-220ENST00000498431 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
MUC1-220ENST00000498431 KIAA0556O60303 1618 aa27.91■■■□□ 2.06
MUC1-220ENST00000498431 EPRSP07814 1512 aaKnown RBP27.91■■■□□ 2.06
MUC1-220ENST00000498431 ZCCHC11Q5TAX3 1644 aaKnown RBP27.9■■■□□ 2.06
MUC1-220ENST00000498431 MAP3K4Q9Y6R4 1608 aa27.88■■■□□ 2.05
MUC1-220ENST00000498431 COL17A1Q9UMD9 1497 aaPredicted RBP27.88■■■□□ 2.05
MUC1-220ENST00000498431 ADGRL1O94910 1474 aa27.79■■■□□ 2.04
MUC1-220ENST00000498431 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
MUC1-220ENST00000498431 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.03
MUC1-220ENST00000498431 WDR7Q9Y4E6 1490 aa27.74■■■□□ 2.03
MUC1-220ENST00000498431 ABCA8O94911 1581 aa27.67■■■□□ 2.02
MUC1-220ENST00000498431 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
MUC1-220ENST00000498431 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
MUC1-220ENST00000498431 CD109Q6YHK3 1445 aa27.6■■■□□ 2.01
MUC1-220ENST00000498431 CFAP43Q8NDM7 1665 aa27.6■■■□□ 2.01
MUC1-220ENST00000498431 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
MUC1-220ENST00000498431 MAGI3Q5TCQ9 1506 aa27.58■■■□□ 2.01
MUC1-220ENST00000498431 ILDR1Q86SU0 546 aaPredicted RBP27.51■■□□□ 1.99
MUC1-220ENST00000498431 HECW2Q9P2P5 1572 aa27.51■■□□□ 1.99
MUC1-220ENST00000498431 ARID3CA6NKF2 412 aa27.48■■□□□ 1.99
MUC1-220ENST00000498431 P3H3Q8IVL6 736 aa27.47■■□□□ 1.99
MUC1-220ENST00000498431 ATP10BO94823 1461 aa27.44■■□□□ 1.98
MUC1-220ENST00000498431 KIF21BO75037 1637 aa27.42■■□□□ 1.98
MUC1-220ENST00000498431 ARAP3Q8WWN8 1544 aa27.38■■□□□ 1.97
MUC1-220ENST00000498431 SAMD9Q5K651 1589 aa27.37■■□□□ 1.97
MUC1-220ENST00000498431 ABCA9Q8IUA7 1624 aa27.35■■□□□ 1.97
MUC1-220ENST00000498431 RAPGEF6Q8TEU7 1601 aa27.31■■□□□ 1.96
MUC1-220ENST00000498431 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
MUC1-220ENST00000498431 FAM9AQ8IZU1 332 aaPredicted RBP27.29■■□□□ 1.96
MUC1-220ENST00000498431 RAPGEF3O95398 923 aa27.24■■□□□ 1.95
MUC1-220ENST00000498431 NUP153P49790 1475 aaKnown RBP27.23■■□□□ 1.95
MUC1-220ENST00000498431 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
MUC1-220ENST00000498431 NEO1Q92859 1461 aa27.21■■□□□ 1.95
MUC1-220ENST00000498431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.21■■□□□ 1.95
MUC1-220ENST00000498431 HNRNPUL2Q1KMD3 747 aaKnown RBP27.21■■□□□ 1.95
MUC1-220ENST00000498431 FRMPD1Q5SYB0 1578 aa27.21■■□□□ 1.95
MUC1-220ENST00000498431 RANGAP1P46060 587 aaPredicted RBP27.2■■□□□ 1.94
MUC1-220ENST00000498431 ADAMTSL3P82987 1691 aa27.2■■□□□ 1.94
MUC1-220ENST00000498431 FHOD3Q2V2M9 1422 aa27.19■■□□□ 1.94
MUC1-220ENST00000498431 PTPRMP28827 1452 aa27.15■■□□□ 1.94
MUC1-220ENST00000498431 BCORL1Q5H9F3 1711 aa27.11■■□□□ 1.93
MUC1-220ENST00000498431 EEA1Q15075 1411 aa27.1■■□□□ 1.93
MUC1-220ENST00000498431 MADDQ8WXG6 1647 aa27.08■■□□□ 1.93
MUC1-220ENST00000498431 ARHGEF40Q8TER5 1519 aa27.05■■□□□ 1.92
MUC1-220ENST00000498431 RICTORQ6R327 1708 aa27.04■■□□□ 1.92
MUC1-220ENST00000498431 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
MUC1-220ENST00000498431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.04■■□□□ 1.92
MUC1-220ENST00000498431 PLEKHD1A6NEE1 506 aa27.03■■□□□ 1.92
MUC1-220ENST00000498431 DENND4BO75064 1496 aaPredicted RBP27.02■■□□□ 1.92
MUC1-220ENST00000498431 TTC37Q6PGP7 1564 aa27.01■■□□□ 1.92
MUC1-220ENST00000498431 AKNAQ7Z591 1439 aa27.01■■□□□ 1.91
MUC1-220ENST00000498431 FANCAO15360 1455 aa27■■□□□ 1.91
MUC1-220ENST00000498431 EFCAB5A4FU69 1503 aa26.99■■□□□ 1.91
MUC1-220ENST00000498431 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
MUC1-220ENST00000498431 CDK13Q14004 1512 aaKnown RBP26.96■■□□□ 1.91
MUC1-220ENST00000498431 RIMS1Q86UR5 1692 aaKnown RBP26.96■■□□□ 1.91
MUC1-220ENST00000498431 PCF11O94913 1555 aaKnown RBP26.96■■□□□ 1.91
MUC1-220ENST00000498431 LMTK3Q96Q04 1460 aa26.94■■□□□ 1.9
MUC1-220ENST00000498431 SIGLEC1Q9BZZ2 1709 aa26.94■■□□□ 1.9
MUC1-220ENST00000498431 ZMYM4Q5VZL5 1548 aa26.93■■□□□ 1.9
MUC1-220ENST00000498431 YEATS2Q9ULM3 1422 aa26.91■■□□□ 1.9
MUC1-220ENST00000498431 FBXO41Q8TF61 875 aa26.9■■□□□ 1.9
MUC1-220ENST00000498431 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
MUC1-220ENST00000498431 HECW1Q76N89 1606 aa26.86■■□□□ 1.89
MUC1-220ENST00000498431 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
MUC1-220ENST00000498431 PLPPR3Q6T4P5 718 aa26.83■■□□□ 1.89
MUC1-220ENST00000498431 PLCH2O75038 1416 aa26.82■■□□□ 1.88
MUC1-220ENST00000498431 POGZQ7Z3K3 1410 aa26.82■■□□□ 1.88
MUC1-220ENST00000498431 SCAPERQ9BY12 1400 aa26.82■■□□□ 1.88
MUC1-220ENST00000498431 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms