RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 SHROOM2Q13796 1616 aa23.89■■□□□ 1.42
USP11-212ENST00000497179 CTTNBP2Q8WZ74 1663 aa23.86■■□□□ 1.41
USP11-212ENST00000497179 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
USP11-212ENST00000497179 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
USP11-212ENST00000497179 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
USP11-212ENST00000497179 RIMBP3CA6NJZ7 1639 aa23.8■■□□□ 1.4
USP11-212ENST00000497179 RIMBP3BA6NNM3 1639 aa23.8■■□□□ 1.4
USP11-212ENST00000497179 RIMBP3Q9UFD9 1639 aa23.8■■□□□ 1.4
USP11-212ENST00000497179 JPH4Q96JJ6 628 aa23.76■■□□□ 1.39
USP11-212ENST00000497179 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
USP11-212ENST00000497179 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
USP11-212ENST00000497179 PRG4Q92954 1404 aaPredicted RBP23.73■■□□□ 1.39
USP11-212ENST00000497179 ARAP1Q96P48 1450 aa23.66■■□□□ 1.38
USP11-212ENST00000497179 DISP1Q96F81 1524 aa23.65■■□□□ 1.38
USP11-212ENST00000497179 EHMT2Q96KQ7 1210 aa23.65■■□□□ 1.38
USP11-212ENST00000497179 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
USP11-212ENST00000497179 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
USP11-212ENST00000497179 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
USP11-212ENST00000497179 SAMD9Q5K651 1589 aa23.59■■□□□ 1.37
USP11-212ENST00000497179 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
USP11-212ENST00000497179 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
USP11-212ENST00000497179 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
USP11-212ENST00000497179 PTPRGP23470 1445 aa23.48■■□□□ 1.35
USP11-212ENST00000497179 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
USP11-212ENST00000497179 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
USP11-212ENST00000497179 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
USP11-212ENST00000497179 FHOD3Q2V2M9 1422 aa23.41■■□□□ 1.34
USP11-212ENST00000497179 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
USP11-212ENST00000497179 CLIP1P30622 1438 aa23.38■■□□□ 1.33
USP11-212ENST00000497179 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
USP11-212ENST00000497179 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
USP11-212ENST00000497179 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
USP11-212ENST00000497179 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
USP11-212ENST00000497179 UHRF1BP1LA0JNW5 1464 aa23.35■■□□□ 1.33
USP11-212ENST00000497179 ABCA8O94911 1581 aa23.35■■□□□ 1.33
USP11-212ENST00000497179 ABCC2Q92887 1545 aa23.34■■□□□ 1.33
USP11-212ENST00000497179 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
USP11-212ENST00000497179 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
USP11-212ENST00000497179 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
USP11-212ENST00000497179 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
USP11-212ENST00000497179 ZCCHC11Q5TAX3 1644 aaKnown RBP23.19■■□□□ 1.3
USP11-212ENST00000497179 NUP153P49790 1475 aaKnown RBP23.18■■□□□ 1.3
USP11-212ENST00000497179 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
USP11-212ENST00000497179 NPM1P06748 294 aaKnown RBP eCLIP23.17■■□□□ 1.3
USP11-212ENST00000497179 PCF11O94913 1555 aaKnown RBP23.16■■□□□ 1.3
USP11-212ENST00000497179 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
USP11-212ENST00000497179 CASKIN1Q8WXD9 1431 aa23.14■■□□□ 1.29
USP11-212ENST00000497179 FYCO1Q9BQS8 1478 aa23.12■■□□□ 1.29
USP11-212ENST00000497179 ATP10BO94823 1461 aa23.11■■□□□ 1.29
USP11-212ENST00000497179 EPRSP07814 1512 aaKnown RBP23.07■■□□□ 1.28
USP11-212ENST00000497179 ASXL2Q76L83 1435 aa23.07■■□□□ 1.28
USP11-212ENST00000497179 VPS8Q8N3P4 1428 aa23.07■■□□□ 1.28
USP11-212ENST00000497179 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
USP11-212ENST00000497179 CDK13Q14004 1512 aaKnown RBP23.04■■□□□ 1.28
USP11-212ENST00000497179 ARID3CA6NKF2 412 aa23.04■■□□□ 1.28
USP11-212ENST00000497179 CCDC18Q5T9S5 1454 aa23.02■■□□□ 1.28
USP11-212ENST00000497179 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
USP11-212ENST00000497179 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
USP11-212ENST00000497179 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
USP11-212ENST00000497179 DIP2BQ9P265 1576 aa23■■□□□ 1.27
USP11-212ENST00000497179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
USP11-212ENST00000497179 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
USP11-212ENST00000497179 KIF13AQ9H1H9 1805 aa22.95■■□□□ 1.26
USP11-212ENST00000497179 GLI2P10070 1586 aa22.93■■□□□ 1.26
USP11-212ENST00000497179 CFAP43Q8NDM7 1665 aa22.9■■□□□ 1.26
USP11-212ENST00000497179 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
USP11-212ENST00000497179 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.25
USP11-212ENST00000497179 CDK11AQ9UQ88 783 aaPredicted RBP22.88■■□□□ 1.25
USP11-212ENST00000497179 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
USP11-212ENST00000497179 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
USP11-212ENST00000497179 TIAM1Q13009 1591 aa22.87■■□□□ 1.25
USP11-212ENST00000497179 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
USP11-212ENST00000497179 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
USP11-212ENST00000497179 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
USP11-212ENST00000497179 MAP3K4Q9Y6R4 1608 aa22.84■■□□□ 1.25
USP11-212ENST00000497179 KCNH8Q96L42 1107 aa22.83■■□□□ 1.25
USP11-212ENST00000497179 KIF14Q15058 1648 aa22.82■■□□□ 1.24
USP11-212ENST00000497179 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
USP11-212ENST00000497179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.24
USP11-212ENST00000497179 TTC37Q6PGP7 1564 aa22.77■■□□□ 1.24
USP11-212ENST00000497179 MTUS2Q5JR59 1369 aa22.76■■□□□ 1.23
USP11-212ENST00000497179 PPRC1Q5VV67 1664 aaKnown RBP22.75■■□□□ 1.23
USP11-212ENST00000497179 CD109Q6YHK3 1445 aa22.74■■□□□ 1.23
USP11-212ENST00000497179 LRRC9Q6ZRR7 1453 aa22.74■■□□□ 1.23
USP11-212ENST00000497179 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
USP11-212ENST00000497179 APLP2Q06481 763 aa22.71■■□□□ 1.23
USP11-212ENST00000497179 TEX14Q8IWB6 1497 aa22.69■■□□□ 1.22
USP11-212ENST00000497179 SUPT6HQ7KZ85 1726 aaKnown RBP22.68■■□□□ 1.22
USP11-212ENST00000497179 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
USP11-212ENST00000497179 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
USP11-212ENST00000497179 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
USP11-212ENST00000497179 NCOA2Q15596 1464 aa22.64■■□□□ 1.21
USP11-212ENST00000497179 PLCH2O75038 1416 aa22.64■■□□□ 1.21
USP11-212ENST00000497179 PREX2Q70Z35 1606 aa22.64■■□□□ 1.21
USP11-212ENST00000497179 CFAP74Q9C0B2 1584 aa22.62■■□□□ 1.21
USP11-212ENST00000497179 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
USP11-212ENST00000497179 NEO1Q92859 1461 aa22.6■■□□□ 1.21
USP11-212ENST00000497179 GPATCH8Q9UKJ3 1502 aaKnown RBP22.59■■□□□ 1.21
USP11-212ENST00000497179 FANCAO15360 1455 aa22.59■■□□□ 1.21
USP11-212ENST00000497179 CDC42BPBQ9Y5S2 1711 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms