RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
PMF1-205ENST00000497069 GOLGA3Q08378 1498 aa25.92■■□□□ 1.74
PMF1-205ENST00000497069 JPH4Q96JJ6 628 aa25.9■■□□□ 1.74
PMF1-205ENST00000497069 IQGAP2Q13576 1575 aa25.89■■□□□ 1.73
PMF1-205ENST00000497069 UBTFP17480 764 aaKnown RBP25.88■■□□□ 1.73
PMF1-205ENST00000497069 CTTNBP2Q8WZ74 1663 aa25.87■■□□□ 1.73
PMF1-205ENST00000497069 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
PMF1-205ENST00000497069 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
PMF1-205ENST00000497069 PRG4Q92954 1404 aaPredicted RBP25.82■■□□□ 1.72
PMF1-205ENST00000497069 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
PMF1-205ENST00000497069 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
PMF1-205ENST00000497069 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
PMF1-205ENST00000497069 CARMIL2Q6F5E8 1435 aa25.75■■□□□ 1.71
PMF1-205ENST00000497069 UGGT2Q9NYU1 1516 aa25.74■■□□□ 1.71
PMF1-205ENST00000497069 ERCC6L2Q5T890 1561 aa25.72■■□□□ 1.71
PMF1-205ENST00000497069 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.7
PMF1-205ENST00000497069 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
PMF1-205ENST00000497069 ARAP1Q96P48 1450 aa25.65■■□□□ 1.7
PMF1-205ENST00000497069 CYB5RLQ6IPT4 315 aa25.64■■□□□ 1.7
PMF1-205ENST00000497069 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.69
PMF1-205ENST00000497069 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
PMF1-205ENST00000497069 KIAA0556O60303 1618 aa25.62■■□□□ 1.69
PMF1-205ENST00000497069 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
PMF1-205ENST00000497069 PTPRGP23470 1445 aa25.57■■□□□ 1.68
PMF1-205ENST00000497069 P3H3Q8IVL6 736 aa25.57■■□□□ 1.68
PMF1-205ENST00000497069 EFCAB5A4FU69 1503 aa25.55■■□□□ 1.68
PMF1-205ENST00000497069 SAMD9Q5K651 1589 aa25.55■■□□□ 1.68
PMF1-205ENST00000497069 CLIP1P30622 1438 aa25.46■■□□□ 1.67
PMF1-205ENST00000497069 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
PMF1-205ENST00000497069 ARHGAP35Q9NRY4 1499 aa25.46■■□□□ 1.67
PMF1-205ENST00000497069 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
PMF1-205ENST00000497069 UACAQ9BZF9 1416 aa25.39■■□□□ 1.66
PMF1-205ENST00000497069 NPM1P06748 294 aaKnown RBP eCLIP25.35■■□□□ 1.65
PMF1-205ENST00000497069 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
PMF1-205ENST00000497069 FMN1Q68DA7 1419 aa25.34■■□□□ 1.65
PMF1-205ENST00000497069 UHRF1BP1LA0JNW5 1464 aa25.33■■□□□ 1.65
PMF1-205ENST00000497069 ABCC2Q92887 1545 aa25.32■■□□□ 1.64
PMF1-205ENST00000497069 ADCY10Q96PN6 1610 aa25.32■■□□□ 1.64
PMF1-205ENST00000497069 ABCA8O94911 1581 aa25.31■■□□□ 1.64
PMF1-205ENST00000497069 RAPGEF6Q8TEU7 1601 aa25.26■■□□□ 1.63
PMF1-205ENST00000497069 ATP1B4Q9UN42 357 aaPredicted RBP25.24■■□□□ 1.63
PMF1-205ENST00000497069 KDM5BQ9UGL1 1544 aa25.2■■□□□ 1.62
PMF1-205ENST00000497069 ARID3CA6NKF2 412 aa25.18■■□□□ 1.62
PMF1-205ENST00000497069 NUP153P49790 1475 aaKnown RBP25.16■■□□□ 1.62
PMF1-205ENST00000497069 HECW1Q76N89 1606 aa25.16■■□□□ 1.62
PMF1-205ENST00000497069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.16■■□□□ 1.62
PMF1-205ENST00000497069 HNRNPUL2Q1KMD3 747 aaKnown RBP25.16■■□□□ 1.62
PMF1-205ENST00000497069 CASKIN1Q8WXD9 1431 aa25.15■■□□□ 1.62
PMF1-205ENST00000497069 ZCCHC11Q5TAX3 1644 aaKnown RBP25.14■■□□□ 1.61
PMF1-205ENST00000497069 PCF11O94913 1555 aaKnown RBP25.13■■□□□ 1.61
PMF1-205ENST00000497069 ATP10BO94823 1461 aa25.12■■□□□ 1.61
PMF1-205ENST00000497069 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
PMF1-205ENST00000497069 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
PMF1-205ENST00000497069 VPS8Q8N3P4 1428 aa25.1■■□□□ 1.61
PMF1-205ENST00000497069 ASXL2Q76L83 1435 aa25.08■■□□□ 1.61
PMF1-205ENST00000497069 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
PMF1-205ENST00000497069 TRHP20396 242 aaPredicted RBP25.05■■□□□ 1.6
PMF1-205ENST00000497069 CCDC18Q5T9S5 1454 aa25.04■■□□□ 1.6
PMF1-205ENST00000497069 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
PMF1-205ENST00000497069 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
PMF1-205ENST00000497069 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
PMF1-205ENST00000497069 WDR7Q9Y4E6 1490 aa25.02■■□□□ 1.6
PMF1-205ENST00000497069 ABCC10Q5T3U5 1492 aa24.97■■□□□ 1.59
PMF1-205ENST00000497069 KCNH8Q96L42 1107 aa24.96■■□□□ 1.59
PMF1-205ENST00000497069 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.58
PMF1-205ENST00000497069 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
PMF1-205ENST00000497069 APLP2Q06481 763 aa24.92■■□□□ 1.58
PMF1-205ENST00000497069 DIP2BQ9P265 1576 aa24.92■■□□□ 1.58
PMF1-205ENST00000497069 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
PMF1-205ENST00000497069 GLI2P10070 1586 aa24.85■■□□□ 1.57
PMF1-205ENST00000497069 MTUS2Q5JR59 1369 aa24.84■■□□□ 1.57
PMF1-205ENST00000497069 KIF13AQ9H1H9 1805 aa24.83■■□□□ 1.57
PMF1-205ENST00000497069 TIAM1Q13009 1591 aa24.83■■□□□ 1.57
PMF1-205ENST00000497069 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
PMF1-205ENST00000497069 MAP3K1Q13233 1512 aa24.81■■□□□ 1.56
PMF1-205ENST00000497069 MAGI3Q5TCQ9 1506 aa24.79■■□□□ 1.56
PMF1-205ENST00000497069 KIF14Q15058 1648 aa24.79■■□□□ 1.56
PMF1-205ENST00000497069 CD109Q6YHK3 1445 aa24.77■■□□□ 1.56
PMF1-205ENST00000497069 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
PMF1-205ENST00000497069 ABCA9Q8IUA7 1624 aa24.75■■□□□ 1.55
PMF1-205ENST00000497069 MAP3K4Q9Y6R4 1608 aa24.74■■□□□ 1.55
PMF1-205ENST00000497069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
PMF1-205ENST00000497069 LRRC9Q6ZRR7 1453 aa24.73■■□□□ 1.55
PMF1-205ENST00000497069 KANK4Q5T7N3 995 aaPredicted RBP24.7■■□□□ 1.54
PMF1-205ENST00000497069 TTC37Q6PGP7 1564 aa24.69■■□□□ 1.54
PMF1-205ENST00000497069 TSPOAP1O95153 1857 aa24.67■■□□□ 1.54
PMF1-205ENST00000497069 TEX14Q8IWB6 1497 aa24.67■■□□□ 1.54
PMF1-205ENST00000497069 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.53
PMF1-205ENST00000497069 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
PMF1-205ENST00000497069 PLCH2O75038 1416 aa24.61■■□□□ 1.53
PMF1-205ENST00000497069 NCOA2Q15596 1464 aa24.61■■□□□ 1.53
PMF1-205ENST00000497069 MYO5CQ9NQX4 1742 aa24.6■■□□□ 1.53
PMF1-205ENST00000497069 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
PMF1-205ENST00000497069 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.53
PMF1-205ENST00000497069 FANCAO15360 1455 aa24.57■■□□□ 1.52
PMF1-205ENST00000497069 ARHGAP5Q13017 1502 aa24.56■■□□□ 1.52
PMF1-205ENST00000497069 ARAP3Q8WWN8 1544 aa24.56■■□□□ 1.52
PMF1-205ENST00000497069 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
PMF1-205ENST00000497069 NEO1Q92859 1461 aa24.55■■□□□ 1.52
PMF1-205ENST00000497069 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms