RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
C4A-258ENST00000496659 SYNJ2O15056 1496 aa16.26■□□□□ 0.19
C4A-258ENST00000496659 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
C4A-258ENST00000496659 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
C4A-258ENST00000496659 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
C4A-258ENST00000496659 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
C4A-258ENST00000496659 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
C4A-258ENST00000496659 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
C4A-258ENST00000496659 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
C4A-258ENST00000496659 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
C4A-258ENST00000496659 NUP160Q12769 1436 aa16.09■□□□□ 0.17
C4A-258ENST00000496659 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
C4A-258ENST00000496659 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
C4A-258ENST00000496659 ERCC6L2Q5T890 1561 aa16.06■□□□□ 0.16
C4A-258ENST00000496659 IQGAP2Q13576 1575 aa16.05■□□□□ 0.16
C4A-258ENST00000496659 KIAA0586Q9BVV6 1533 aa16.05■□□□□ 0.16
C4A-258ENST00000496659 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
C4A-258ENST00000496659 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
C4A-258ENST00000496659 CLIP1P30622 1438 aa15.96■□□□□ 0.15
C4A-258ENST00000496659 UGGT2Q9NYU1 1516 aa15.96■□□□□ 0.15
C4A-258ENST00000496659 SHROOM2Q13796 1616 aa15.95■□□□□ 0.14
C4A-258ENST00000496659 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
C4A-258ENST00000496659 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
C4A-258ENST00000496659 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
C4A-258ENST00000496659 PRG4Q92954 1404 aaPredicted RBP15.91■□□□□ 0.14
C4A-258ENST00000496659 RANGAP1P46060 587 aaPredicted RBP15.9■□□□□ 0.14
C4A-258ENST00000496659 KIAA0556O60303 1618 aa15.89■□□□□ 0.13
C4A-258ENST00000496659 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
C4A-258ENST00000496659 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
C4A-258ENST00000496659 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
C4A-258ENST00000496659 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
C4A-258ENST00000496659 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
C4A-258ENST00000496659 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
C4A-258ENST00000496659 PTPRGP23470 1445 aa15.73■□□□□ 0.11
C4A-258ENST00000496659 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.11
C4A-258ENST00000496659 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
C4A-258ENST00000496659 KIF13AQ9H1H9 1805 aa15.71■□□□□ 0.11
C4A-258ENST00000496659 HECW1Q76N89 1606 aa15.71■□□□□ 0.11
C4A-258ENST00000496659 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
C4A-258ENST00000496659 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
C4A-258ENST00000496659 ADCY10Q96PN6 1610 aa15.7■□□□□ 0.1
C4A-258ENST00000496659 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
C4A-258ENST00000496659 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
C4A-258ENST00000496659 FAM69CQ0P6D2 419 aa15.67■□□□□ 0.1
C4A-258ENST00000496659 ABCA8O94911 1581 aa15.66■□□□□ 0.1
C4A-258ENST00000496659 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
C4A-258ENST00000496659 APLP2Q06481 763 aa15.65■□□□□ 0.1
C4A-258ENST00000496659 UACAQ9BZF9 1416 aa15.65■□□□□ 0.1
C4A-258ENST00000496659 ABCC10Q5T3U5 1492 aa15.64■□□□□ 0.09
C4A-258ENST00000496659 PLB1Q6P1J6 1458 aa15.64■□□□□ 0.09
C4A-258ENST00000496659 ABCC2Q92887 1545 aa15.63■□□□□ 0.09
C4A-258ENST00000496659 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
C4A-258ENST00000496659 UHRF1BP1LA0JNW5 1464 aa15.62■□□□□ 0.09
C4A-258ENST00000496659 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
C4A-258ENST00000496659 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
C4A-258ENST00000496659 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
C4A-258ENST00000496659 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
C4A-258ENST00000496659 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.09
C4A-258ENST00000496659 TIAM1Q13009 1591 aa15.58■□□□□ 0.09
C4A-258ENST00000496659 DIP2BQ9P265 1576 aa15.58■□□□□ 0.09
C4A-258ENST00000496659 CDK11AQ9UQ88 783 aaPredicted RBP15.54■□□□□ 0.08
C4A-258ENST00000496659 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
C4A-258ENST00000496659 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
C4A-258ENST00000496659 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
C4A-258ENST00000496659 LRRIQ1Q96JM4 1722 aa15.52■□□□□ 0.08
C4A-258ENST00000496659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
C4A-258ENST00000496659 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
C4A-258ENST00000496659 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
C4A-258ENST00000496659 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
C4A-258ENST00000496659 ZCCHC11Q5TAX3 1644 aaKnown RBP15.5■□□□□ 0.07
C4A-258ENST00000496659 ATP10BO94823 1461 aa15.5■□□□□ 0.07
C4A-258ENST00000496659 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
C4A-258ENST00000496659 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
C4A-258ENST00000496659 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
C4A-258ENST00000496659 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
C4A-258ENST00000496659 PLEKHD1A6NEE1 506 aa15.45■□□□□ 0.06
C4A-258ENST00000496659 KIF14Q15058 1648 aa15.43■□□□□ 0.06
C4A-258ENST00000496659 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
C4A-258ENST00000496659 PPRC1Q5VV67 1664 aaKnown RBP15.42■□□□□ 0.06
C4A-258ENST00000496659 GLI2P10070 1586 aa15.42■□□□□ 0.06
C4A-258ENST00000496659 KDM6BO15054 1643 aa15.42■□□□□ 0.06
C4A-258ENST00000496659 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
C4A-258ENST00000496659 MAGI3Q5TCQ9 1506 aa15.41■□□□□ 0.06
C4A-258ENST00000496659 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
C4A-258ENST00000496659 COL17A1Q9UMD9 1497 aaPredicted RBP15.37■□□□□ 0.05
C4A-258ENST00000496659 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
C4A-258ENST00000496659 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
C4A-258ENST00000496659 KDM4FA0A1W2PPD8 638 aa15.35■□□□□ 0.05
C4A-258ENST00000496659 PPARGC1BQ86YN6 1023 aaKnown RBP15.34■□□□□ 0.05
C4A-258ENST00000496659 MAP3K4Q9Y6R4 1608 aa15.34■□□□□ 0.05
C4A-258ENST00000496659 ITSN2Q9NZM3 1697 aa15.33■□□□□ 0.04
C4A-258ENST00000496659 CCNB3Q8WWL7 1395 aa15.32■□□□□ 0.04
C4A-258ENST00000496659 MYOM3Q5VTT5 1437 aa15.3■□□□□ 0.04
C4A-258ENST00000496659 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
C4A-258ENST00000496659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.04
C4A-258ENST00000496659 TTC37Q6PGP7 1564 aa15.28■□□□□ 0.04
C4A-258ENST00000496659 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
C4A-258ENST00000496659 PHLDB1Q86UU1 1377 aa15.27■□□□□ 0.04
C4A-258ENST00000496659 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.04
C4A-258ENST00000496659 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms