RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 RAPGEF2Q9Y4G8 1499 aa38.13■■■■□ 3.69
CHRD-217ENST00000496527 SHROOM2Q13796 1616 aa38.12■■■■□ 3.69
CHRD-217ENST00000496527 KIAA0586Q9BVV6 1533 aa38.11■■■■□ 3.69
CHRD-217ENST00000496527 PRG4Q92954 1404 aaPredicted RBP38.04■■■■□ 3.68
CHRD-217ENST00000496527 ERCC6L2Q5T890 1561 aa38.03■■■■□ 3.68
CHRD-217ENST00000496527 CSRNP3Q8WYN3 585 aa38■■■■□ 3.67
CHRD-217ENST00000496527 EEA1Q15075 1411 aa38■■■■□ 3.67
CHRD-217ENST00000496527 PRXQ9BXM0 1461 aa37.97■■■■□ 3.67
CHRD-217ENST00000496527 FAM9AQ8IZU1 332 aaPredicted RBP37.9■■■■□ 3.66
CHRD-217ENST00000496527 IQGAP2Q13576 1575 aa37.87■■■■□ 3.65
CHRD-217ENST00000496527 CARMIL2Q6F5E8 1435 aa37.74■■■■□ 3.63
CHRD-217ENST00000496527 CTTNBP2Q8WZ74 1663 aa37.7■■■■□ 3.63
CHRD-217ENST00000496527 UGGT2Q9NYU1 1516 aa37.66■■■■□ 3.62
CHRD-217ENST00000496527 TNIKQ9UKE5 1360 aa37.61■■■■□ 3.61
CHRD-217ENST00000496527 DISP1Q96F81 1524 aa37.6■■■■□ 3.61
CHRD-217ENST00000496527 PTPRGP23470 1445 aa37.6■■■■□ 3.61
CHRD-217ENST00000496527 TTBK1Q5TCY1 1321 aaPredicted RBP37.58■■■■□ 3.61
CHRD-217ENST00000496527 KIF21BO75037 1637 aa37.57■■■■□ 3.6
CHRD-217ENST00000496527 GOLGA3Q08378 1498 aa37.5■■■■□ 3.59
CHRD-217ENST00000496527 KIAA0556O60303 1618 aa37.5■■■■□ 3.59
CHRD-217ENST00000496527 TRHP20396 242 aaPredicted RBP37.48■■■■□ 3.59
CHRD-217ENST00000496527 NPM1P06748 294 aaKnown RBP eCLIP37.43■■■■□ 3.58
CHRD-217ENST00000496527 EHMT2Q96KQ7 1210 aa37.42■■■■□ 3.58
CHRD-217ENST00000496527 ADCY10Q96PN6 1610 aa37.39■■■■□ 3.58
CHRD-217ENST00000496527 UBTFP17480 764 aaKnown RBP37.37■■■■□ 3.57
CHRD-217ENST00000496527 UACAQ9BZF9 1416 aa37.32■■■■□ 3.56
CHRD-217ENST00000496527 RANGAP1P46060 587 aaPredicted RBP37.31■■■■□ 3.56
CHRD-217ENST00000496527 P3H3Q8IVL6 736 aa37.3■■■■□ 3.56
CHRD-217ENST00000496527 UHRF1BP1LA0JNW5 1464 aa37.26■■■■□ 3.56
CHRD-217ENST00000496527 SAMD9Q5K651 1589 aa37.23■■■■□ 3.55
CHRD-217ENST00000496527 ABCC2Q92887 1545 aa37.22■■■■□ 3.55
CHRD-217ENST00000496527 MAPKBP1O60336 1514 aa37.18■■■■□ 3.54
CHRD-217ENST00000496527 PLB1Q6P1J6 1458 aa37.16■■■■□ 3.54
CHRD-217ENST00000496527 EFCAB5A4FU69 1503 aa37.1■■■■□ 3.53
CHRD-217ENST00000496527 ABCA8O94911 1581 aa37.09■■■■□ 3.53
CHRD-217ENST00000496527 KDM5BQ9UGL1 1544 aa37.08■■■■□ 3.53
CHRD-217ENST00000496527 FHOD3Q2V2M9 1422 aa37.07■■■■□ 3.52
CHRD-217ENST00000496527 ABCC10Q5T3U5 1492 aa37.03■■■■□ 3.52
CHRD-217ENST00000496527 FAM69CQ0P6D2 419 aa37.02■■■■□ 3.52
CHRD-217ENST00000496527 ASXL2Q76L83 1435 aa37■■■■□ 3.51
CHRD-217ENST00000496527 ZCCHC11Q5TAX3 1644 aaKnown RBP36.99■■■■□ 3.51
CHRD-217ENST00000496527 KIF13AQ9H1H9 1805 aa36.96■■■■□ 3.51
CHRD-217ENST00000496527 DIP2BQ9P265 1576 aa36.93■■■■□ 3.5
CHRD-217ENST00000496527 ARHGAP35Q9NRY4 1499 aa36.91■■■■□ 3.5
CHRD-217ENST00000496527 RAPGEF6Q8TEU7 1601 aa36.91■■■■□ 3.5
CHRD-217ENST00000496527 ARID3CA6NKF2 412 aa36.88■■■■□ 3.49
CHRD-217ENST00000496527 ATP10BO94823 1461 aa36.82■■■■□ 3.49
CHRD-217ENST00000496527 WDR7Q9Y4E6 1490 aa36.8■■■■□ 3.48
CHRD-217ENST00000496527 FMN1Q68DA7 1419 aa36.79■■■■□ 3.48
CHRD-217ENST00000496527 NUP153P49790 1475 aaKnown RBP36.77■■■■□ 3.48
CHRD-217ENST00000496527 EPRSP07814 1512 aaKnown RBP36.77■■■■□ 3.48
CHRD-217ENST00000496527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.77■■■■□ 3.48
CHRD-217ENST00000496527 HNRNPUL2Q1KMD3 747 aaKnown RBP36.77■■■■□ 3.48
CHRD-217ENST00000496527 GLI2P10070 1586 aa36.74■■■■□ 3.47
CHRD-217ENST00000496527 CLIP1P30622 1438 aa36.72■■■■□ 3.47
CHRD-217ENST00000496527 KCNH8Q96L42 1107 aa36.7■■■■□ 3.47
CHRD-217ENST00000496527 ATP1B4Q9UN42 357 aaPredicted RBP36.67■■■■□ 3.46
CHRD-217ENST00000496527 LOC105371045A0A1W2PR82 267 aa36.66■■■■□ 3.46
CHRD-217ENST00000496527 TSPOAP1O95153 1857 aa36.64■■■■□ 3.46
CHRD-217ENST00000496527 HECW1Q76N89 1606 aa36.58■■■■□ 3.45
CHRD-217ENST00000496527 PLEKHD1A6NEE1 506 aa36.57■■■■□ 3.44
CHRD-217ENST00000496527 MAP3K4Q9Y6R4 1608 aa36.56■■■■□ 3.44
CHRD-217ENST00000496527 CEP162Q5TB80 1403 aa36.54■■■■□ 3.44
CHRD-217ENST00000496527 CDK13Q14004 1512 aaKnown RBP36.52■■■■□ 3.44
CHRD-217ENST00000496527 CD109Q6YHK3 1445 aa36.5■■■■□ 3.43
CHRD-217ENST00000496527 CASKIN1Q8WXD9 1431 aa36.49■■■■□ 3.43
CHRD-217ENST00000496527 PPRC1Q5VV67 1664 aaKnown RBP36.48■■■■□ 3.43
CHRD-217ENST00000496527 CFAP43Q8NDM7 1665 aa36.46■■■■□ 3.43
CHRD-217ENST00000496527 TEX14Q8IWB6 1497 aa36.45■■■■□ 3.43
CHRD-217ENST00000496527 PCF11O94913 1555 aaKnown RBP36.44■■■■□ 3.42
CHRD-217ENST00000496527 CDK11AQ9UQ88 783 aaPredicted RBP36.43■■■■□ 3.42
CHRD-217ENST00000496527 MAGI3Q5TCQ9 1506 aa36.39■■■■□ 3.42
CHRD-217ENST00000496527 FYCO1Q9BQS8 1478 aa36.38■■■■□ 3.41
CHRD-217ENST00000496527 ABCA9Q8IUA7 1624 aa36.38■■■■□ 3.41
CHRD-217ENST00000496527 KDM6BO15054 1643 aa36.37■■■■□ 3.41
CHRD-217ENST00000496527 CCDC18Q5T9S5 1454 aa36.35■■■■□ 3.41
CHRD-217ENST00000496527 LRRIQ1Q96JM4 1722 aa36.32■■■■□ 3.4
CHRD-217ENST00000496527 TROQ12816 1431 aaPredicted RBP36.25■■■■□ 3.39
CHRD-217ENST00000496527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.24■■■■□ 3.39
CHRD-217ENST00000496527 COL17A1Q9UMD9 1497 aaPredicted RBP36.19■■■■□ 3.38
CHRD-217ENST00000496527 TTC37Q6PGP7 1564 aa36.17■■■■□ 3.38
CHRD-217ENST00000496527 PHLDB1Q86UU1 1377 aa36.15■■■■□ 3.38
CHRD-217ENST00000496527 KIF14Q15058 1648 aa36.15■■■■□ 3.38
CHRD-217ENST00000496527 NEO1Q92859 1461 aa36.12■■■■□ 3.37
CHRD-217ENST00000496527 VPS8Q8N3P4 1428 aa36.1■■■■□ 3.37
CHRD-217ENST00000496527 ARAP3Q8WWN8 1544 aa36.08■■■■□ 3.37
CHRD-217ENST00000496527 PLCH2O75038 1416 aa36.07■■■■□ 3.36
CHRD-217ENST00000496527 FANCAO15360 1455 aa36.05■■■■□ 3.36
CHRD-217ENST00000496527 CFAP74Q9C0B2 1584 aa36.01■■■■□ 3.35
CHRD-217ENST00000496527 MTUS2Q5JR59 1369 aa36.01■■■■□ 3.35
CHRD-217ENST00000496527 AKNAQ7Z591 1439 aa36■■■■□ 3.35
CHRD-217ENST00000496527 MYO5CQ9NQX4 1742 aa35.99■■■■□ 3.35
CHRD-217ENST00000496527 EFCAB2Q5VUJ9 269 aa35.98■■■■□ 3.35
CHRD-217ENST00000496527 RAPGEF3O95398 923 aa35.94■■■■□ 3.34
CHRD-217ENST00000496527 ARHGAP5Q13017 1502 aa35.91■■■■□ 3.34
CHRD-217ENST00000496527 DENND4BO75064 1496 aaPredicted RBP35.89■■■■□ 3.34
CHRD-217ENST00000496527 EHBP1L1Q8N3D4 1523 aa35.88■■■■□ 3.33
CHRD-217ENST00000496527 ADGRL1O94910 1474 aa35.86■■■■□ 3.33
CHRD-217ENST00000496527 TIAM1Q13009 1591 aa35.86■■■■□ 3.33
CHRD-217ENST00000496527 PREX2Q70Z35 1606 aa35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms