RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
YIPF4-204ENST00000495355 PRG4Q92954 1404 aaPredicted RBP31.62■■■□□ 2.65
YIPF4-204ENST00000495355 JPH4Q96JJ6 628 aa31.58■■■□□ 2.65
YIPF4-204ENST00000495355 CUL7Q14999 1698 aa31.57■■■□□ 2.65
YIPF4-204ENST00000495355 KIAA0586Q9BVV6 1533 aa31.48■■■□□ 2.63
YIPF4-204ENST00000495355 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
YIPF4-204ENST00000495355 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
YIPF4-204ENST00000495355 ADCY10Q96PN6 1610 aa31.32■■■□□ 2.6
YIPF4-204ENST00000495355 MAPKBP1O60336 1514 aa31.21■■■□□ 2.59
YIPF4-204ENST00000495355 IQGAP2Q13576 1575 aa31.21■■■□□ 2.59
YIPF4-204ENST00000495355 ABCC10Q5T3U5 1492 aa31.15■■■□□ 2.58
YIPF4-204ENST00000495355 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.58
YIPF4-204ENST00000495355 DIP2BQ9P265 1576 aa31.13■■■□□ 2.57
YIPF4-204ENST00000495355 PTPRGP23470 1445 aa31.11■■■□□ 2.57
YIPF4-204ENST00000495355 DISP1Q96F81 1524 aa31.11■■■□□ 2.57
YIPF4-204ENST00000495355 TNIKQ9UKE5 1360 aa31.08■■■□□ 2.57
YIPF4-204ENST00000495355 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.56
YIPF4-204ENST00000495355 NPM1P06748 294 aaKnown RBP eCLIP31.05■■■□□ 2.56
YIPF4-204ENST00000495355 UGGT2Q9NYU1 1516 aa31.04■■■□□ 2.56
YIPF4-204ENST00000495355 FAM69CQ0P6D2 419 aa31.03■■■□□ 2.56
YIPF4-204ENST00000495355 TTBK1Q5TCY1 1321 aaPredicted RBP31■■■□□ 2.55
YIPF4-204ENST00000495355 ABCC2Q92887 1545 aa30.98■■■□□ 2.55
YIPF4-204ENST00000495355 KIAA0556O60303 1618 aa30.96■■■□□ 2.55
YIPF4-204ENST00000495355 UHRF1BP1LA0JNW5 1464 aa30.95■■■□□ 2.55
YIPF4-204ENST00000495355 CTTNBP2Q8WZ74 1663 aa30.93■■■□□ 2.54
YIPF4-204ENST00000495355 PRXQ9BXM0 1461 aa30.93■■■□□ 2.54
YIPF4-204ENST00000495355 UACAQ9BZF9 1416 aa30.91■■■□□ 2.54
YIPF4-204ENST00000495355 ASXL2Q76L83 1435 aa30.85■■■□□ 2.53
YIPF4-204ENST00000495355 TSPOAP1O95153 1857 aa30.84■■■□□ 2.53
YIPF4-204ENST00000495355 KDM5BQ9UGL1 1544 aa30.83■■■□□ 2.53
YIPF4-204ENST00000495355 PLB1Q6P1J6 1458 aa30.79■■■□□ 2.52
YIPF4-204ENST00000495355 GLI2P10070 1586 aa30.78■■■□□ 2.52
YIPF4-204ENST00000495355 PPRC1Q5VV67 1664 aaKnown RBP30.78■■■□□ 2.52
YIPF4-204ENST00000495355 ZCCHC11Q5TAX3 1644 aaKnown RBP30.77■■■□□ 2.52
YIPF4-204ENST00000495355 KDM6BO15054 1643 aa30.75■■■□□ 2.51
YIPF4-204ENST00000495355 GOLGA3Q08378 1498 aa30.7■■■□□ 2.5
YIPF4-204ENST00000495355 EPRSP07814 1512 aaKnown RBP30.69■■■□□ 2.5
YIPF4-204ENST00000495355 ABCA8O94911 1581 aa30.69■■■□□ 2.5
YIPF4-204ENST00000495355 MAP3K4Q9Y6R4 1608 aa30.64■■■□□ 2.5
YIPF4-204ENST00000495355 CSRNP3Q8WYN3 585 aa30.61■■■□□ 2.49
YIPF4-204ENST00000495355 WDR7Q9Y4E6 1490 aa30.57■■■□□ 2.48
YIPF4-204ENST00000495355 SAMD9Q5K651 1589 aa30.54■■■□□ 2.48
YIPF4-204ENST00000495355 COL17A1Q9UMD9 1497 aaPredicted RBP30.54■■■□□ 2.48
YIPF4-204ENST00000495355 EEA1Q15075 1411 aa30.51■■■□□ 2.47
YIPF4-204ENST00000495355 P3H3Q8IVL6 736 aa30.47■■■□□ 2.47
YIPF4-204ENST00000495355 TEX14Q8IWB6 1497 aa30.42■■■□□ 2.46
YIPF4-204ENST00000495355 KDM4FA0A1W2PPD8 638 aa30.41■■■□□ 2.46
YIPF4-204ENST00000495355 CFAP43Q8NDM7 1665 aa30.39■■■□□ 2.46
YIPF4-204ENST00000495355 ATP10BO94823 1461 aa30.39■■■□□ 2.46
YIPF4-204ENST00000495355 FAM9AQ8IZU1 332 aaPredicted RBP30.37■■■□□ 2.45
YIPF4-204ENST00000495355 MAGI3Q5TCQ9 1506 aa30.36■■■□□ 2.45
YIPF4-204ENST00000495355 KIF21BO75037 1637 aa30.36■■■□□ 2.45
YIPF4-204ENST00000495355 RAPGEF6Q8TEU7 1601 aa30.34■■■□□ 2.45
YIPF4-204ENST00000495355 CD109Q6YHK3 1445 aa30.33■■■□□ 2.45
YIPF4-204ENST00000495355 ARID3CA6NKF2 412 aa30.33■■■□□ 2.45
YIPF4-204ENST00000495355 KCNH8Q96L42 1107 aa30.33■■■□□ 2.45
YIPF4-204ENST00000495355 FHOD3Q2V2M9 1422 aa30.3■■■□□ 2.44
YIPF4-204ENST00000495355 NUP153P49790 1475 aaKnown RBP30.26■■■□□ 2.44
YIPF4-204ENST00000495355 RANGAP1P46060 587 aaPredicted RBP30.23■■■□□ 2.43
YIPF4-204ENST00000495355 ABCA9Q8IUA7 1624 aa30.22■■■□□ 2.43
YIPF4-204ENST00000495355 ADGRL1O94910 1474 aa30.19■■■□□ 2.42
YIPF4-204ENST00000495355 EFCAB5A4FU69 1503 aa30.18■■■□□ 2.42
YIPF4-204ENST00000495355 ARAP3Q8WWN8 1544 aa30.12■■■□□ 2.41
YIPF4-204ENST00000495355 EHMT2Q96KQ7 1210 aa30.04■■■□□ 2.4
YIPF4-204ENST00000495355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
YIPF4-204ENST00000495355 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
YIPF4-204ENST00000495355 ARHGAP35Q9NRY4 1499 aa30■■■□□ 2.39
YIPF4-204ENST00000495355 CDK13Q14004 1512 aaKnown RBP29.99■■■□□ 2.39
YIPF4-204ENST00000495355 NEO1Q92859 1461 aa29.99■■■□□ 2.39
YIPF4-204ENST00000495355 FRMPD1Q5SYB0 1578 aa29.98■■■□□ 2.39
YIPF4-204ENST00000495355 PHLDB1Q86UU1 1377 aa29.96■■■□□ 2.39
YIPF4-204ENST00000495355 UBTFP17480 764 aaKnown RBP29.96■■■□□ 2.39
YIPF4-204ENST00000495355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.96■■■□□ 2.397e-13■□□□□ 10
YIPF4-204ENST00000495355 TTC37Q6PGP7 1564 aa29.94■■■□□ 2.38
YIPF4-204ENST00000495355 PLEKHD1A6NEE1 506 aa29.91■■■□□ 2.38
YIPF4-204ENST00000495355 RAPGEF3O95398 923 aa29.91■■■□□ 2.38
YIPF4-204ENST00000495355 FMN1Q68DA7 1419 aa29.86■■■□□ 2.37
YIPF4-204ENST00000495355 HECW1Q76N89 1606 aa29.85■■■□□ 2.37
YIPF4-204ENST00000495355 RICTORQ6R327 1708 aa29.83■■■□□ 2.37
YIPF4-204ENST00000495355 LRRIQ1Q96JM4 1722 aa29.82■■■□□ 2.36
YIPF4-204ENST00000495355 FANCAO15360 1455 aa29.81■■■□□ 2.36
YIPF4-204ENST00000495355 AKNAQ7Z591 1439 aa29.8■■■□□ 2.36
YIPF4-204ENST00000495355 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
YIPF4-204ENST00000495355 DENND4BO75064 1496 aaPredicted RBP29.76■■■□□ 2.35
YIPF4-204ENST00000495355 ADAMTSL3P82987 1691 aa29.76■■■□□ 2.35
YIPF4-204ENST00000495355 HECW2Q9P2P5 1572 aa29.75■■■□□ 2.35
YIPF4-204ENST00000495355 ARHGEF40Q8TER5 1519 aa29.75■■■□□ 2.35
YIPF4-204ENST00000495355 KIF14Q15058 1648 aa29.74■■■□□ 2.35
YIPF4-204ENST00000495355 PLCH2O75038 1416 aa29.71■■■□□ 2.35
YIPF4-204ENST00000495355 ZMYM4Q5VZL5 1548 aa29.71■■■□□ 2.35
YIPF4-204ENST00000495355 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.35
YIPF4-204ENST00000495355 BCORL1Q5H9F3 1711 aa29.69■■■□□ 2.34
YIPF4-204ENST00000495355 PCF11O94913 1555 aaKnown RBP29.69■■■□□ 2.34
YIPF4-204ENST00000495355 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
YIPF4-204ENST00000495355 TROQ12816 1431 aaPredicted RBP29.66■■■□□ 2.34
YIPF4-204ENST00000495355 MYO5CQ9NQX4 1742 aa29.65■■■□□ 2.34
YIPF4-204ENST00000495355 YEATS2Q9ULM3 1422 aa29.63■■■□□ 2.33
YIPF4-204ENST00000495355 PTPRMP28827 1452 aa29.62■■■□□ 2.33
YIPF4-204ENST00000495355 MADDQ8WXG6 1647 aa29.62■■■□□ 2.33
YIPF4-204ENST00000495355 POGZQ7Z3K3 1410 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms