RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
HDAC6-234ENST00000493923 NUP160Q12769 1436 aa14.28□□□□□ -0.12
HDAC6-234ENST00000493923 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
HDAC6-234ENST00000493923 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
HDAC6-234ENST00000493923 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-234ENST00000493923 SHROOM2Q13796 1616 aa14.22□□□□□ -0.13
HDAC6-234ENST00000493923 IGF1RP08069 1367 aa14.16□□□□□ -0.14
HDAC6-234ENST00000493923 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
HDAC6-234ENST00000493923 PRG4Q92954 1404 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-234ENST00000493923 JPH4Q96JJ6 628 aa14.12□□□□□ -0.15
HDAC6-234ENST00000493923 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
HDAC6-234ENST00000493923 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
HDAC6-234ENST00000493923 CUL7Q14999 1698 aa14.06□□□□□ -0.16
HDAC6-234ENST00000493923 KIAA0586Q9BVV6 1533 aa14.04□□□□□ -0.16
HDAC6-234ENST00000493923 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
HDAC6-234ENST00000493923 KIF13AQ9H1H9 1805 aa14.01□□□□□ -0.17
HDAC6-234ENST00000493923 ADCY10Q96PN6 1610 aa14□□□□□ -0.17
HDAC6-234ENST00000493923 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-234ENST00000493923 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
HDAC6-234ENST00000493923 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
HDAC6-234ENST00000493923 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
HDAC6-234ENST00000493923 MAPKBP1O60336 1514 aa13.9□□□□□ -0.19
HDAC6-234ENST00000493923 PTPRGP23470 1445 aa13.9□□□□□ -0.19
HDAC6-234ENST00000493923 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
HDAC6-234ENST00000493923 ABCC10Q5T3U5 1492 aa13.89□□□□□ -0.19
HDAC6-234ENST00000493923 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
HDAC6-234ENST00000493923 TNIKQ9UKE5 1360 aa13.87□□□□□ -0.19
HDAC6-234ENST00000493923 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC6-234ENST00000493923 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
HDAC6-234ENST00000493923 CARMIL2Q6F5E8 1435 aa13.84□□□□□ -0.19
HDAC6-234ENST00000493923 TSPOAP1O95153 1857 aa13.83□□□□□ -0.2
HDAC6-234ENST00000493923 ABCC2Q92887 1545 aa13.82□□□□□ -0.2
HDAC6-234ENST00000493923 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
HDAC6-234ENST00000493923 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
HDAC6-234ENST00000493923 CTTNBP2Q8WZ74 1663 aa13.8□□□□□ -0.2
HDAC6-234ENST00000493923 UACAQ9BZF9 1416 aa13.8□□□□□ -0.2
HDAC6-234ENST00000493923 ASXL2Q76L83 1435 aa13.79□□□□□ -0.2
HDAC6-234ENST00000493923 UHRF1BP1LA0JNW5 1464 aa13.79□□□□□ -0.2
HDAC6-234ENST00000493923 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
HDAC6-234ENST00000493923 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
HDAC6-234ENST00000493923 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
HDAC6-234ENST00000493923 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
HDAC6-234ENST00000493923 GLI2P10070 1586 aa13.71□□□□□ -0.21
HDAC6-234ENST00000493923 KDM6BO15054 1643 aa13.71□□□□□ -0.22
HDAC6-234ENST00000493923 EPRSP07814 1512 aaKnown RBP13.7□□□□□ -0.22
HDAC6-234ENST00000493923 ABCA8O94911 1581 aa13.7□□□□□ -0.22
HDAC6-234ENST00000493923 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
HDAC6-234ENST00000493923 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
HDAC6-234ENST00000493923 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-234ENST00000493923 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
HDAC6-234ENST00000493923 MAP3K4Q9Y6R4 1608 aa13.66□□□□□ -0.22
HDAC6-234ENST00000493923 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-234ENST00000493923 ARID3CA6NKF2 412 aa13.65□□□□□ -0.22
HDAC6-234ENST00000493923 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
HDAC6-234ENST00000493923 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
HDAC6-234ENST00000493923 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
HDAC6-234ENST00000493923 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-234ENST00000493923 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
HDAC6-234ENST00000493923 ATP10BO94823 1461 aa13.59□□□□□ -0.23
HDAC6-234ENST00000493923 EEA1Q15075 1411 aa13.57□□□□□ -0.24
HDAC6-234ENST00000493923 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
HDAC6-234ENST00000493923 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
HDAC6-234ENST00000493923 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
HDAC6-234ENST00000493923 RAPGEF6Q8TEU7 1601 aa13.54□□□□□ -0.24
HDAC6-234ENST00000493923 CFAP43Q8NDM7 1665 aa13.54□□□□□ -0.24
HDAC6-234ENST00000493923 KIF21BO75037 1637 aa13.53□□□□□ -0.24
HDAC6-234ENST00000493923 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
HDAC6-234ENST00000493923 MAGI3Q5TCQ9 1506 aa13.53□□□□□ -0.24
HDAC6-234ENST00000493923 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.25
HDAC6-234ENST00000493923 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
HDAC6-234ENST00000493923 ABCA9Q8IUA7 1624 aa13.47□□□□□ -0.25
HDAC6-234ENST00000493923 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
HDAC6-234ENST00000493923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-234ENST00000493923 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
HDAC6-234ENST00000493923 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
HDAC6-234ENST00000493923 ARAP3Q8WWN8 1544 aa13.42□□□□□ -0.26
HDAC6-234ENST00000493923 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
HDAC6-234ENST00000493923 UBTFP17480 764 aaKnown RBP13.41□□□□□ -0.26
HDAC6-234ENST00000493923 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
HDAC6-234ENST00000493923 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
HDAC6-234ENST00000493923 TTC37Q6PGP7 1564 aa13.39□□□□□ -0.27
HDAC6-234ENST00000493923 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
HDAC6-234ENST00000493923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC6-234ENST00000493923 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
HDAC6-234ENST00000493923 NEO1Q92859 1461 aa13.36□□□□□ -0.27
HDAC6-234ENST00000493923 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
HDAC6-234ENST00000493923 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-234ENST00000493923 RICTORQ6R327 1708 aa13.32□□□□□ -0.28
HDAC6-234ENST00000493923 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
HDAC6-234ENST00000493923 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
HDAC6-234ENST00000493923 KIF14Q15058 1648 aa13.31□□□□□ -0.28
HDAC6-234ENST00000493923 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
HDAC6-234ENST00000493923 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
HDAC6-234ENST00000493923 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
HDAC6-234ENST00000493923 FANCAO15360 1455 aa13.29□□□□□ -0.28
HDAC6-234ENST00000493923 HECW2Q9P2P5 1572 aa13.29□□□□□ -0.28
HDAC6-234ENST00000493923 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
HDAC6-234ENST00000493923 DENND4BO75064 1496 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-234ENST00000493923 YEATS2Q9ULM3 1422 aa13.27□□□□□ -0.29
HDAC6-234ENST00000493923 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms