RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
ABCD4-216ENST00000493752 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
ABCD4-216ENST00000493752 KIF21BO75037 1637 aa13.26□□□□□ -0.29
ABCD4-216ENST00000493752 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
ABCD4-216ENST00000493752 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
ABCD4-216ENST00000493752 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-216ENST00000493752 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
ABCD4-216ENST00000493752 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
ABCD4-216ENST00000493752 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
ABCD4-216ENST00000493752 SHROOM2Q13796 1616 aa13.18□□□□□ -0.3
ABCD4-216ENST00000493752 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
ABCD4-216ENST00000493752 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
ABCD4-216ENST00000493752 UGGT2Q9NYU1 1516 aa13.17□□□□□ -0.3
ABCD4-216ENST00000493752 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-216ENST00000493752 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
ABCD4-216ENST00000493752 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
ABCD4-216ENST00000493752 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
ABCD4-216ENST00000493752 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
ABCD4-216ENST00000493752 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
ABCD4-216ENST00000493752 PTPRGP23470 1445 aa13.12□□□□□ -0.31
ABCD4-216ENST00000493752 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
ABCD4-216ENST00000493752 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
ABCD4-216ENST00000493752 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
ABCD4-216ENST00000493752 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
ABCD4-216ENST00000493752 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
ABCD4-216ENST00000493752 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
ABCD4-216ENST00000493752 CLIP1P30622 1438 aa13.05□□□□□ -0.32
ABCD4-216ENST00000493752 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
ABCD4-216ENST00000493752 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
ABCD4-216ENST00000493752 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
ABCD4-216ENST00000493752 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.33
ABCD4-216ENST00000493752 CEP162Q5TB80 1403 aa13.02□□□□□ -0.33
ABCD4-216ENST00000493752 UACAQ9BZF9 1416 aa13.02□□□□□ -0.33
ABCD4-216ENST00000493752 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
ABCD4-216ENST00000493752 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
ABCD4-216ENST00000493752 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
ABCD4-216ENST00000493752 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
ABCD4-216ENST00000493752 ABCA8O94911 1581 aa12.93□□□□□ -0.34
ABCD4-216ENST00000493752 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
ABCD4-216ENST00000493752 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-216ENST00000493752 KDM5BQ9UGL1 1544 aa12.9□□□□□ -0.34
ABCD4-216ENST00000493752 ADCY10Q96PN6 1610 aa12.9□□□□□ -0.34
ABCD4-216ENST00000493752 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
ABCD4-216ENST00000493752 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
ABCD4-216ENST00000493752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-216ENST00000493752 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
ABCD4-216ENST00000493752 ATP10BO94823 1461 aa12.88□□□□□ -0.35
ABCD4-216ENST00000493752 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
ABCD4-216ENST00000493752 RAPGEF6Q8TEU7 1601 aa12.87□□□□□ -0.35
ABCD4-216ENST00000493752 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
ABCD4-216ENST00000493752 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
ABCD4-216ENST00000493752 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
ABCD4-216ENST00000493752 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
ABCD4-216ENST00000493752 ASXL2Q76L83 1435 aa12.83□□□□□ -0.36
ABCD4-216ENST00000493752 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
ABCD4-216ENST00000493752 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.36
ABCD4-216ENST00000493752 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
ABCD4-216ENST00000493752 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
ABCD4-216ENST00000493752 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
ABCD4-216ENST00000493752 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
ABCD4-216ENST00000493752 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
ABCD4-216ENST00000493752 APLP2Q06481 763 aa12.79□□□□□ -0.36
ABCD4-216ENST00000493752 ZCCHC11Q5TAX3 1644 aaKnown RBP12.79□□□□□ -0.36
ABCD4-216ENST00000493752 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
ABCD4-216ENST00000493752 PCF11O94913 1555 aaKnown RBP12.78□□□□□ -0.36
ABCD4-216ENST00000493752 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
ABCD4-216ENST00000493752 CDK13Q14004 1512 aaKnown RBP12.77□□□□□ -0.37
ABCD4-216ENST00000493752 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
ABCD4-216ENST00000493752 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
ABCD4-216ENST00000493752 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.37
ABCD4-216ENST00000493752 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-216ENST00000493752 GLI2P10070 1586 aa12.7□□□□□ -0.38
ABCD4-216ENST00000493752 CD109Q6YHK3 1445 aa12.68□□□□□ -0.38
ABCD4-216ENST00000493752 DIP2BQ9P265 1576 aa12.68□□□□□ -0.38
ABCD4-216ENST00000493752 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
ABCD4-216ENST00000493752 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
ABCD4-216ENST00000493752 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
ABCD4-216ENST00000493752 LRRIQ1Q96JM4 1722 aa12.66□□□□□ -0.38
ABCD4-216ENST00000493752 PLCH2O75038 1416 aa12.63□□□□□ -0.39
ABCD4-216ENST00000493752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39
ABCD4-216ENST00000493752 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
ABCD4-216ENST00000493752 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
ABCD4-216ENST00000493752 CCNB3Q8WWL7 1395 aa12.62□□□□□ -0.39
ABCD4-216ENST00000493752 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
ABCD4-216ENST00000493752 PHLDB1Q86UU1 1377 aa12.61□□□□□ -0.39
ABCD4-216ENST00000493752 KIF14Q15058 1648 aa12.61□□□□□ -0.39
ABCD4-216ENST00000493752 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
ABCD4-216ENST00000493752 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
ABCD4-216ENST00000493752 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
ABCD4-216ENST00000493752 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-216ENST00000493752 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
ABCD4-216ENST00000493752 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
ABCD4-216ENST00000493752 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
ABCD4-216ENST00000493752 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
ABCD4-216ENST00000493752 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
ABCD4-216ENST00000493752 ARAP3Q8WWN8 1544 aa12.57□□□□□ -0.4
ABCD4-216ENST00000493752 FANCAO15360 1455 aa12.56□□□□□ -0.4
ABCD4-216ENST00000493752 NEO1Q92859 1461 aa12.56□□□□□ -0.4
ABCD4-216ENST00000493752 AKNAQ7Z591 1439 aa12.55□□□□□ -0.4
ABCD4-216ENST00000493752 ZNF777Q9ULD5 760 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms