RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 CUL7Q14999 1698 aa23.62■■□□□ 1.37
TRIM50-204ENST00000493498 AEBP2Q6ZN18 517 aaPredicted RBP23.6■■□□□ 1.37
TRIM50-204ENST00000493498 KIF13AQ9H1H9 1805 aa23.58■■□□□ 1.37
TRIM50-204ENST00000493498 KIAA0586Q9BVV6 1533 aa23.57■■□□□ 1.36
TRIM50-204ENST00000493498 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
TRIM50-204ENST00000493498 IGF1RP08069 1367 aa23.54■■□□□ 1.36
TRIM50-204ENST00000493498 MAPKBP1O60336 1514 aa23.51■■□□□ 1.35
TRIM50-204ENST00000493498 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
TRIM50-204ENST00000493498 ADCY10Q96PN6 1610 aa23.45■■□□□ 1.34
TRIM50-204ENST00000493498 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
TRIM50-204ENST00000493498 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
TRIM50-204ENST00000493498 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
TRIM50-204ENST00000493498 CARMIL2Q6F5E8 1435 aa23.38■■□□□ 1.33
TRIM50-204ENST00000493498 PTPRGP23470 1445 aa23.35■■□□□ 1.33
TRIM50-204ENST00000493498 IQGAP2Q13576 1575 aa23.33■■□□□ 1.33
TRIM50-204ENST00000493498 TNIKQ9UKE5 1360 aa23.32■■□□□ 1.32
TRIM50-204ENST00000493498 ABCC2Q92887 1545 aa23.26■■□□□ 1.31
TRIM50-204ENST00000493498 KDM6BO15054 1643 aa23.25■■□□□ 1.31
TRIM50-204ENST00000493498 TSPOAP1O95153 1857 aa23.23■■□□□ 1.31
TRIM50-204ENST00000493498 UHRF1BP1LA0JNW5 1464 aa23.23■■□□□ 1.31
TRIM50-204ENST00000493498 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
TRIM50-204ENST00000493498 PLB1Q6P1J6 1458 aa23.21■■□□□ 1.31
TRIM50-204ENST00000493498 TTBK1Q5TCY1 1321 aaPredicted RBP23.19■■□□□ 1.3
TRIM50-204ENST00000493498 UACAQ9BZF9 1416 aa23.18■■□□□ 1.3
TRIM50-204ENST00000493498 UGGT2Q9NYU1 1516 aa23.18■■□□□ 1.3
TRIM50-204ENST00000493498 GLI2P10070 1586 aa23.17■■□□□ 1.3
TRIM50-204ENST00000493498 DISP1Q96F81 1524 aa23.17■■□□□ 1.3
TRIM50-204ENST00000493498 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
TRIM50-204ENST00000493498 KIAA0556O60303 1618 aa23.11■■□□□ 1.29
TRIM50-204ENST00000493498 KDM5BQ9UGL1 1544 aa23.1■■□□□ 1.29
TRIM50-204ENST00000493498 CTTNBP2Q8WZ74 1663 aa23.07■■□□□ 1.28
TRIM50-204ENST00000493498 PPRC1Q5VV67 1664 aaKnown RBP23.05■■□□□ 1.28
TRIM50-204ENST00000493498 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
TRIM50-204ENST00000493498 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
TRIM50-204ENST00000493498 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
TRIM50-204ENST00000493498 TEX14Q8IWB6 1497 aa23.02■■□□□ 1.28
TRIM50-204ENST00000493498 MAP3K4Q9Y6R4 1608 aa23.01■■□□□ 1.27
TRIM50-204ENST00000493498 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
TRIM50-204ENST00000493498 WDR7Q9Y4E6 1490 aa22.95■■□□□ 1.26
TRIM50-204ENST00000493498 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
TRIM50-204ENST00000493498 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
TRIM50-204ENST00000493498 ABCA8O94911 1581 aa22.89■■□□□ 1.26
TRIM50-204ENST00000493498 CFAP43Q8NDM7 1665 aa22.86■■□□□ 1.25
TRIM50-204ENST00000493498 COL17A1Q9UMD9 1497 aaPredicted RBP22.84■■□□□ 1.25
TRIM50-204ENST00000493498 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
TRIM50-204ENST00000493498 ADGRL1O94910 1474 aa22.82■■□□□ 1.24
TRIM50-204ENST00000493498 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
TRIM50-204ENST00000493498 KCNH8Q96L42 1107 aa22.75■■□□□ 1.23
TRIM50-204ENST00000493498 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
TRIM50-204ENST00000493498 EEA1Q15075 1411 aa22.71■■□□□ 1.23
TRIM50-204ENST00000493498 SAMD9Q5K651 1589 aa22.7■■□□□ 1.22
TRIM50-204ENST00000493498 ATP10BO94823 1461 aa22.67■■□□□ 1.22
TRIM50-204ENST00000493498 PHLDB1Q86UU1 1377 aa22.67■■□□□ 1.22
TRIM50-204ENST00000493498 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
TRIM50-204ENST00000493498 ARAP3Q8WWN8 1544 aa22.65■■□□□ 1.22
TRIM50-204ENST00000493498 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
TRIM50-204ENST00000493498 ABCA9Q8IUA7 1624 aa22.64■■□□□ 1.21
TRIM50-204ENST00000493498 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
TRIM50-204ENST00000493498 NEO1Q92859 1461 aa22.56■■□□□ 1.2
TRIM50-204ENST00000493498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
TRIM50-204ENST00000493498 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
TRIM50-204ENST00000493498 KIF21BO75037 1637 aa22.54■■□□□ 1.2
TRIM50-204ENST00000493498 HECW2Q9P2P5 1572 aa22.54■■□□□ 1.2
TRIM50-204ENST00000493498 NUP153P49790 1475 aaKnown RBP22.52■■□□□ 1.2
TRIM50-204ENST00000493498 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.19
TRIM50-204ENST00000493498 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
TRIM50-204ENST00000493498 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
TRIM50-204ENST00000493498 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
TRIM50-204ENST00000493498 CFAP74Q9C0B2 1584 aa22.44■■□□□ 1.18
TRIM50-204ENST00000493498 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
TRIM50-204ENST00000493498 RAPGEF3O95398 923 aa22.41■■□□□ 1.18
TRIM50-204ENST00000493498 ADAMTSL3P82987 1691 aa22.39■■□□□ 1.18
TRIM50-204ENST00000493498 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
TRIM50-204ENST00000493498 DENND4BO75064 1496 aaPredicted RBP22.37■■□□□ 1.17
TRIM50-204ENST00000493498 ILDR1Q86SU0 546 aaPredicted RBP22.37■■□□□ 1.17
TRIM50-204ENST00000493498 BCORL1Q5H9F3 1711 aa22.35■■□□□ 1.17
TRIM50-204ENST00000493498 AKNAQ7Z591 1439 aa22.35■■□□□ 1.17
TRIM50-204ENST00000493498 FANCAO15360 1455 aa22.34■■□□□ 1.17
TRIM50-204ENST00000493498 PTPRMP28827 1452 aa22.34■■□□□ 1.17
TRIM50-204ENST00000493498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.17
TRIM50-204ENST00000493498 ARHGEF40Q8TER5 1519 aa22.34■■□□□ 1.17
TRIM50-204ENST00000493498 RICTORQ6R327 1708 aa22.34■■□□□ 1.17
TRIM50-204ENST00000493498 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
TRIM50-204ENST00000493498 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
TRIM50-204ENST00000493498 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
TRIM50-204ENST00000493498 ZMYM4Q5VZL5 1548 aa22.29■■□□□ 1.16
TRIM50-204ENST00000493498 MAGI2Q86UL8 1455 aa22.28■■□□□ 1.16
TRIM50-204ENST00000493498 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
TRIM50-204ENST00000493498 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
TRIM50-204ENST00000493498 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.16
TRIM50-204ENST00000493498 MADDQ8WXG6 1647 aa22.27■■□□□ 1.16
TRIM50-204ENST00000493498 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
TRIM50-204ENST00000493498 CDK11AQ9UQ88 783 aaPredicted RBP22.25■■□□□ 1.15
TRIM50-204ENST00000493498 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
TRIM50-204ENST00000493498 PLCH2O75038 1416 aa22.23■■□□□ 1.15
TRIM50-204ENST00000493498 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
TRIM50-204ENST00000493498 PCF11O94913 1555 aaKnown RBP22.2■■□□□ 1.14
TRIM50-204ENST00000493498 RIMS1Q86UR5 1692 aaKnown RBP22.2■■□□□ 1.14
TRIM50-204ENST00000493498 ARHGAP35Q9NRY4 1499 aa22.19■■□□□ 1.14
TRIM50-204ENST00000493498 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms