RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 CUX1P39880 1505 aa14.56□□□□□ -0.08
TSC1-207ENST00000493467 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
TSC1-207ENST00000493467 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
TSC1-207ENST00000493467 FBLN2P98095 1184 aa14.54□□□□□ -0.08
TSC1-207ENST00000493467 CFTRP13569 1480 aa14.53□□□□□ -0.08
TSC1-207ENST00000493467 ARAP1Q96P48 1450 aa14.52□□□□□ -0.08
TSC1-207ENST00000493467 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
TSC1-207ENST00000493467 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
TSC1-207ENST00000493467 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
TSC1-207ENST00000493467 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
TSC1-207ENST00000493467 APLP2Q06481 763 aa14.48□□□□□ -0.09
TSC1-207ENST00000493467 RNF216Q9NWF9 866 aaPredicted RBP14.47□□□□□ -0.09
TSC1-207ENST00000493467 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
TSC1-207ENST00000493467 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
TSC1-207ENST00000493467 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
TSC1-207ENST00000493467 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
TSC1-207ENST00000493467 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
TSC1-207ENST00000493467 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
TSC1-207ENST00000493467 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
TSC1-207ENST00000493467 CUX2O14529 1486 aa14.38□□□□□ -0.11
TSC1-207ENST00000493467 ARHGAP35Q9NRY4 1499 aa14.37□□□□□ -0.11
TSC1-207ENST00000493467 MAP3K1Q13233 1512 aa14.34□□□□□ -0.11
TSC1-207ENST00000493467 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
TSC1-207ENST00000493467 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
TSC1-207ENST00000493467 RANGAP1P46060 587 aaPredicted RBP14.29□□□□□ -0.12
TSC1-207ENST00000493467 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
TSC1-207ENST00000493467 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
TSC1-207ENST00000493467 TIAM1Q13009 1591 aa14.28□□□□□ -0.12
TSC1-207ENST00000493467 IGF1RP08069 1367 aa14.28□□□□□ -0.12
TSC1-207ENST00000493467 PKD2Q13563 968 aa14.27□□□□□ -0.12
TSC1-207ENST00000493467 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.12
TSC1-207ENST00000493467 CCNB3Q8WWL7 1395 aa14.26□□□□□ -0.13
TSC1-207ENST00000493467 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
TSC1-207ENST00000493467 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
TSC1-207ENST00000493467 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.13
TSC1-207ENST00000493467 MIER1Q8N108 512 aa14.21□□□□□ -0.13
TSC1-207ENST00000493467 HOMEZQ8IX15 550 aa14.21□□□□□ -0.14
TSC1-207ENST00000493467 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
TSC1-207ENST00000493467 CC2D2AQ9P2K1 1620 aa14.2□□□□□ -0.14
TSC1-207ENST00000493467 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
TSC1-207ENST00000493467 CFAP44Q96MT7 982 aa14.19□□□□□ -0.14
TSC1-207ENST00000493467 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
TSC1-207ENST00000493467 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
TSC1-207ENST00000493467 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
TSC1-207ENST00000493467 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
TSC1-207ENST00000493467 EFCAB5A4FU69 1503 aa14.17□□□□□ -0.14
TSC1-207ENST00000493467 ABCA10Q8WWZ4 1543 aa14.17□□□□□ -0.14
TSC1-207ENST00000493467 CUL7Q14999 1698 aa14.16□□□□□ -0.14
TSC1-207ENST00000493467 PCF11O94913 1555 aaKnown RBP14.16□□□□□ -0.14
TSC1-207ENST00000493467 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
TSC1-207ENST00000493467 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
TSC1-207ENST00000493467 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
TSC1-207ENST00000493467 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
TSC1-207ENST00000493467 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.13□□□□□ -0.15
TSC1-207ENST00000493467 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.152e-6■■□□□ 11.4
TSC1-207ENST00000493467 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
TSC1-207ENST00000493467 FYCO1Q9BQS8 1478 aa14.12□□□□□ -0.15
TSC1-207ENST00000493467 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
TSC1-207ENST00000493467 BBXQ8WY36 941 aaPredicted RBP14.11□□□□□ -0.15
TSC1-207ENST00000493467 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
TSC1-207ENST00000493467 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
TSC1-207ENST00000493467 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
TSC1-207ENST00000493467 TMEM132AQ24JP5 1023 aa14.09□□□□□ -0.15
TSC1-207ENST00000493467 YTHDC1Q96MU7 727 aaKnown RBP14.09□□□□□ -0.15
TSC1-207ENST00000493467 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.15
TSC1-207ENST00000493467 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
TSC1-207ENST00000493467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.07□□□□□ -0.16
TSC1-207ENST00000493467 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
TSC1-207ENST00000493467 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
TSC1-207ENST00000493467 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
TSC1-207ENST00000493467 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
TSC1-207ENST00000493467 ABCA5Q8WWZ7 1642 aa14.03□□□□□ -0.16
TSC1-207ENST00000493467 SAMD9Q5K651 1589 aa14.02□□□□□ -0.17
TSC1-207ENST00000493467 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.17
TSC1-207ENST00000493467 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
TSC1-207ENST00000493467 FMN1Q68DA7 1419 aa14□□□□□ -0.17
TSC1-207ENST00000493467 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
TSC1-207ENST00000493467 KIF21AQ7Z4S6 1674 aa13.99□□□□□ -0.17
TSC1-207ENST00000493467 ERICH6Q7L0X2 663 aa13.98□□□□□ -0.17
TSC1-207ENST00000493467 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
TSC1-207ENST00000493467 NESP48681 1621 aa13.98□□□□□ -0.17
TSC1-207ENST00000493467 ITGAEP38570 1179 aa13.97□□□□□ -0.17
TSC1-207ENST00000493467 NBR1Q14596 966 aa13.95□□□□□ -0.18
TSC1-207ENST00000493467 C14orf37Q86TY3 774 aa13.95□□□□□ -0.18
TSC1-207ENST00000493467 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
TSC1-207ENST00000493467 FGD6Q6ZV73 1430 aa13.94□□□□□ -0.18
TSC1-207ENST00000493467 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
TSC1-207ENST00000493467 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
TSC1-207ENST00000493467 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
TSC1-207ENST00000493467 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
TSC1-207ENST00000493467 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
TSC1-207ENST00000493467 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
TSC1-207ENST00000493467 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
TSC1-207ENST00000493467 PTPN23Q9H3S7 1636 aa13.89□□□□□ -0.19
TSC1-207ENST00000493467 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
TSC1-207ENST00000493467 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
TSC1-207ENST00000493467 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
TSC1-207ENST00000493467 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
TSC1-207ENST00000493467 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
TSC1-207ENST00000493467 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms