RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 CHIC1Q5VXU3 224 aa21.27■□□□□ 0.99
TSC1-207ENST00000493467 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
TSC1-207ENST00000493467 NISCHQ9Y2I1 1504 aa20.16■□□□□ 0.82
TSC1-207ENST00000493467 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
TSC1-207ENST00000493467 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
TSC1-207ENST00000493467 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
TSC1-207ENST00000493467 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
TSC1-207ENST00000493467 KCNA4P22459 653 aa17.46■□□□□ 0.39
TSC1-207ENST00000493467 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
TSC1-207ENST00000493467 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
TSC1-207ENST00000493467 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
TSC1-207ENST00000493467 ADRA2BP18089 450 aa17.01■□□□□ 0.31
TSC1-207ENST00000493467 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
TSC1-207ENST00000493467 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
TSC1-207ENST00000493467 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.27
TSC1-207ENST00000493467 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
TSC1-207ENST00000493467 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
TSC1-207ENST00000493467 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
TSC1-207ENST00000493467 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
TSC1-207ENST00000493467 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
TSC1-207ENST00000493467 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
TSC1-207ENST00000493467 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
TSC1-207ENST00000493467 ZBTB22O15209 634 aa16.19■□□□□ 0.18
TSC1-207ENST00000493467 ABCC9O60706 1549 aa16.18■□□□□ 0.18
TSC1-207ENST00000493467 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
TSC1-207ENST00000493467 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
TSC1-207ENST00000493467 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
TSC1-207ENST00000493467 HRCP23327 699 aa15.9■□□□□ 0.14
TSC1-207ENST00000493467 NACADO15069 1562 aa15.88■□□□□ 0.13
TSC1-207ENST00000493467 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
TSC1-207ENST00000493467 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.13
TSC1-207ENST00000493467 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
TSC1-207ENST00000493467 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
TSC1-207ENST00000493467 FOXD1Q16676 465 aa15.72■□□□□ 0.11
TSC1-207ENST00000493467 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
TSC1-207ENST00000493467 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
TSC1-207ENST00000493467 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
TSC1-207ENST00000493467 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
TSC1-207ENST00000493467 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
TSC1-207ENST00000493467 WIZO95785 1651 aa15.54■□□□□ 0.08
TSC1-207ENST00000493467 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
TSC1-207ENST00000493467 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
TSC1-207ENST00000493467 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
TSC1-207ENST00000493467 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
TSC1-207ENST00000493467 FKBP8Q14318 412 aa15.42■□□□□ 0.06
TSC1-207ENST00000493467 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
TSC1-207ENST00000493467 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
TSC1-207ENST00000493467 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
TSC1-207ENST00000493467 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
TSC1-207ENST00000493467 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
TSC1-207ENST00000493467 FAM9AQ8IZU1 332 aaPredicted RBP15.28■□□□□ 0.04
TSC1-207ENST00000493467 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
TSC1-207ENST00000493467 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
TSC1-207ENST00000493467 PLCB2Q00722 1185 aa15.2■□□□□ 0.02
TSC1-207ENST00000493467 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
TSC1-207ENST00000493467 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
TSC1-207ENST00000493467 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
TSC1-207ENST00000493467 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
TSC1-207ENST00000493467 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
TSC1-207ENST00000493467 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
TSC1-207ENST00000493467 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
TSC1-207ENST00000493467 EEA1Q15075 1411 aa15.11■□□□□ 0.01
TSC1-207ENST00000493467 BCANQ96GW7 911 aa15.08■□□□□ 0
TSC1-207ENST00000493467 HAP1P54257 671 aaPredicted RBP15.02■□□□□ -0
TSC1-207ENST00000493467 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
TSC1-207ENST00000493467 CEP162Q5TB80 1403 aa15.01□□□□□ -0.01
TSC1-207ENST00000493467 SOGA1O94964 1423 aa15□□□□□ -0.01
TSC1-207ENST00000493467 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
TSC1-207ENST00000493467 TPRNQ4KMQ1 711 aa14.93□□□□□ -0.02
TSC1-207ENST00000493467 KIF21BO75037 1637 aa14.92□□□□□ -0.02
TSC1-207ENST00000493467 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
TSC1-207ENST00000493467 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
TSC1-207ENST00000493467 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
TSC1-207ENST00000493467 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
TSC1-207ENST00000493467 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
TSC1-207ENST00000493467 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
TSC1-207ENST00000493467 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
TSC1-207ENST00000493467 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
TSC1-207ENST00000493467 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
TSC1-207ENST00000493467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
TSC1-207ENST00000493467 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
TSC1-207ENST00000493467 TOP2BQ02880 1626 aa14.77□□□□□ -0.04
TSC1-207ENST00000493467 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
TSC1-207ENST00000493467 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
TSC1-207ENST00000493467 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
TSC1-207ENST00000493467 CLIP1P30622 1438 aa14.71□□□□□ -0.05
TSC1-207ENST00000493467 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
TSC1-207ENST00000493467 TULP1O00294 542 aaPredicted RBP14.68□□□□□ -0.06
TSC1-207ENST00000493467 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
TSC1-207ENST00000493467 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
TSC1-207ENST00000493467 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
TSC1-207ENST00000493467 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
TSC1-207ENST00000493467 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
TSC1-207ENST00000493467 SCAF1Q9H7N4 1312 aaKnown RBP14.63□□□□□ -0.07
TSC1-207ENST00000493467 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
TSC1-207ENST00000493467 KDM2AQ9Y2K7 1162 aa14.62□□□□□ -0.07
TSC1-207ENST00000493467 TTBK1Q5TCY1 1321 aaPredicted RBP14.61□□□□□ -0.07
TSC1-207ENST00000493467 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
TSC1-207ENST00000493467 ARXQ96QS3 562 aa14.57□□□□□ -0.08
TSC1-207ENST00000493467 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms