RNA–Protein interactions for RNA: ENST00000493389.1

PMM1-209, Transcript of phosphomannomutase 1, humanhuman

TSL 3

Gene PMM1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-209ENST00000493389 SHROOM2Q13796 1616 aa30.2■■■□□ 2.43
PMM1-209ENST00000493389 PRG4Q92954 1404 aaPredicted RBP30.15■■■□□ 2.42
PMM1-209ENST00000493389 KIAA0586Q9BVV6 1533 aa30.15■■■□□ 2.42
PMM1-209ENST00000493389 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
PMM1-209ENST00000493389 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
PMM1-209ENST00000493389 PRXQ9BXM0 1461 aa30.01■■■□□ 2.4
PMM1-209ENST00000493389 CSRNP3Q8WYN3 585 aa29.97■■■□□ 2.39
PMM1-209ENST00000493389 IQGAP2Q13576 1575 aa29.93■■■□□ 2.38
PMM1-209ENST00000493389 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
PMM1-209ENST00000493389 EEA1Q15075 1411 aa29.9■■■□□ 2.38
PMM1-209ENST00000493389 CARMIL2Q6F5E8 1435 aa29.81■■■□□ 2.36
PMM1-209ENST00000493389 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
PMM1-209ENST00000493389 DISP1Q96F81 1524 aa29.8■■■□□ 2.36
PMM1-209ENST00000493389 TTBK1Q5TCY1 1321 aaPredicted RBP29.79■■■□□ 2.36
PMM1-209ENST00000493389 UGGT2Q9NYU1 1516 aa29.79■■■□□ 2.36
PMM1-209ENST00000493389 PTPRGP23470 1445 aa29.77■■■□□ 2.36
PMM1-209ENST00000493389 TNIKQ9UKE5 1360 aa29.77■■■□□ 2.36
PMM1-209ENST00000493389 CTTNBP2Q8WZ74 1663 aa29.71■■■□□ 2.35
PMM1-209ENST00000493389 KIAA0556O60303 1618 aa29.67■■■□□ 2.34
PMM1-209ENST00000493389 ADCY10Q96PN6 1610 aa29.66■■■□□ 2.34
PMM1-209ENST00000493389 KIF21BO75037 1637 aa29.6■■■□□ 2.33
PMM1-209ENST00000493389 NPM1P06748 294 aaKnown RBP eCLIP29.59■■■□□ 2.33
PMM1-209ENST00000493389 EHMT2Q96KQ7 1210 aa29.59■■■□□ 2.33
PMM1-209ENST00000493389 GOLGA3Q08378 1498 aa29.59■■■□□ 2.33
PMM1-209ENST00000493389 UACAQ9BZF9 1416 aa29.55■■■□□ 2.32
PMM1-209ENST00000493389 P3H3Q8IVL6 736 aa29.52■■■□□ 2.32
PMM1-209ENST00000493389 RANGAP1P46060 587 aaPredicted RBP29.51■■■□□ 2.31
PMM1-209ENST00000493389 UHRF1BP1LA0JNW5 1464 aa29.5■■■□□ 2.31
PMM1-209ENST00000493389 ABCC2Q92887 1545 aa29.49■■■□□ 2.31
PMM1-209ENST00000493389 MAPKBP1O60336 1514 aa29.47■■■□□ 2.31
PMM1-209ENST00000493389 PLB1Q6P1J6 1458 aa29.45■■■□□ 2.31
PMM1-209ENST00000493389 UBTFP17480 764 aaKnown RBP29.44■■■□□ 2.3
PMM1-209ENST00000493389 SAMD9Q5K651 1589 aa29.42■■■□□ 2.3
PMM1-209ENST00000493389 ABCC10Q5T3U5 1492 aa29.39■■■□□ 2.3
PMM1-209ENST00000493389 FAM69CQ0P6D2 419 aa29.38■■■□□ 2.29
PMM1-209ENST00000493389 KDM5BQ9UGL1 1544 aa29.37■■■□□ 2.29
PMM1-209ENST00000493389 ABCA8O94911 1581 aa29.36■■■□□ 2.29
PMM1-209ENST00000493389 ASXL2Q76L83 1435 aa29.35■■■□□ 2.29
PMM1-209ENST00000493389 FHOD3Q2V2M9 1422 aa29.34■■■□□ 2.29
PMM1-209ENST00000493389 DIP2BQ9P265 1576 aa29.31■■■□□ 2.28
PMM1-209ENST00000493389 KIF13AQ9H1H9 1805 aa29.29■■■□□ 2.28
PMM1-209ENST00000493389 ZCCHC11Q5TAX3 1644 aaKnown RBP29.27■■■□□ 2.28
PMM1-209ENST00000493389 ARID3CA6NKF2 412 aa29.26■■■□□ 2.27
PMM1-209ENST00000493389 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
PMM1-209ENST00000493389 ARHGAP35Q9NRY4 1499 aa29.17■■■□□ 2.26
PMM1-209ENST00000493389 EPRSP07814 1512 aaKnown RBP29.16■■■□□ 2.26
PMM1-209ENST00000493389 ATP10BO94823 1461 aa29.16■■■□□ 2.26
PMM1-209ENST00000493389 WDR7Q9Y4E6 1490 aa29.16■■■□□ 2.26
PMM1-209ENST00000493389 RAPGEF6Q8TEU7 1601 aa29.15■■■□□ 2.26
PMM1-209ENST00000493389 NUP153P49790 1475 aaKnown RBP29.12■■■□□ 2.25
PMM1-209ENST00000493389 GLI2P10070 1586 aa29.11■■■□□ 2.25
PMM1-209ENST00000493389 KCNH8Q96L42 1107 aa29.07■■■□□ 2.24
PMM1-209ENST00000493389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.04■■■□□ 2.24
PMM1-209ENST00000493389 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
PMM1-209ENST00000493389 FMN1Q68DA7 1419 aa29.02■■■□□ 2.24
PMM1-209ENST00000493389 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
PMM1-209ENST00000493389 CLIP1P30622 1438 aa28.96■■■□□ 2.23
PMM1-209ENST00000493389 MAP3K4Q9Y6R4 1608 aa28.96■■■□□ 2.23
PMM1-209ENST00000493389 ATP1B4Q9UN42 357 aaPredicted RBP28.95■■■□□ 2.22
PMM1-209ENST00000493389 PPRC1Q5VV67 1664 aaKnown RBP28.94■■■□□ 2.22
PMM1-209ENST00000493389 CDK13Q14004 1512 aaKnown RBP28.91■■■□□ 2.22
PMM1-209ENST00000493389 CD109Q6YHK3 1445 aa28.91■■■□□ 2.22
PMM1-209ENST00000493389 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
PMM1-209ENST00000493389 PLEKHD1A6NEE1 506 aa28.87■■■□□ 2.21
PMM1-209ENST00000493389 KDM6BO15054 1643 aa28.85■■■□□ 2.21
PMM1-209ENST00000493389 HECW1Q76N89 1606 aa28.85■■■□□ 2.21
PMM1-209ENST00000493389 TEX14Q8IWB6 1497 aa28.85■■■□□ 2.21
PMM1-209ENST00000493389 MAGI3Q5TCQ9 1506 aa28.83■■■□□ 2.21
PMM1-209ENST00000493389 CFAP43Q8NDM7 1665 aa28.82■■■□□ 2.2
PMM1-209ENST00000493389 COL17A1Q9UMD9 1497 aaPredicted RBP28.81■■■□□ 2.2
PMM1-209ENST00000493389 CEP162Q5TB80 1403 aa28.81■■■□□ 2.2
PMM1-209ENST00000493389 CASKIN1Q8WXD9 1431 aa28.8■■■□□ 2.2
PMM1-209ENST00000493389 PCF11O94913 1555 aaKnown RBP28.79■■■□□ 2.2
PMM1-209ENST00000493389 ABCA9Q8IUA7 1624 aa28.78■■■□□ 2.2
PMM1-209ENST00000493389 CDK11AQ9UQ88 783 aaPredicted RBP28.7■■■□□ 2.18
PMM1-209ENST00000493389 FYCO1Q9BQS8 1478 aa28.7■■■□□ 2.18
PMM1-209ENST00000493389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.69■■■□□ 2.18
PMM1-209ENST00000493389 LRRIQ1Q96JM4 1722 aa28.68■■■□□ 2.18
PMM1-209ENST00000493389 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
PMM1-209ENST00000493389 TROQ12816 1431 aaPredicted RBP28.65■■■□□ 2.18
PMM1-209ENST00000493389 TTC37Q6PGP7 1564 aa28.65■■■□□ 2.18
PMM1-209ENST00000493389 NEO1Q92859 1461 aa28.59■■■□□ 2.17
PMM1-209ENST00000493389 KIF14Q15058 1648 aa28.58■■■□□ 2.17
PMM1-209ENST00000493389 ARAP3Q8WWN8 1544 aa28.58■■■□□ 2.17
PMM1-209ENST00000493389 PHLDB1Q86UU1 1377 aa28.56■■■□□ 2.16
PMM1-209ENST00000493389 FANCAO15360 1455 aa28.53■■■□□ 2.16
PMM1-209ENST00000493389 PLCH2O75038 1416 aa28.53■■■□□ 2.16
PMM1-209ENST00000493389 RAPGEF3O95398 923 aa28.52■■■□□ 2.16
PMM1-209ENST00000493389 AKNAQ7Z591 1439 aa28.51■■■□□ 2.15
PMM1-209ENST00000493389 VPS8Q8N3P4 1428 aa28.44■■■□□ 2.14
PMM1-209ENST00000493389 EFCAB2Q5VUJ9 269 aa28.42■■■□□ 2.14
PMM1-209ENST00000493389 FRMPD1Q5SYB0 1578 aa28.41■■■□□ 2.14
PMM1-209ENST00000493389 CFAP74Q9C0B2 1584 aa28.41■■■□□ 2.14
PMM1-209ENST00000493389 DENND4BO75064 1496 aaPredicted RBP28.41■■■□□ 2.14
PMM1-209ENST00000493389 MTUS2Q5JR59 1369 aa28.4■■■□□ 2.14
PMM1-209ENST00000493389 MYO5CQ9NQX4 1742 aa28.38■■■□□ 2.13
PMM1-209ENST00000493389 ADGRL1O94910 1474 aa28.38■■■□□ 2.13
PMM1-209ENST00000493389 ARHGAP5Q13017 1502 aa28.38■■■□□ 2.13
PMM1-209ENST00000493389 SCAPERQ9BY12 1400 aa28.37■■■□□ 2.13
PMM1-209ENST00000493389 KDM4FA0A1W2PPD8 638 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms