RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
LSM2-214ENST00000493387 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
LSM2-214ENST00000493387 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
LSM2-214ENST00000493387 JPH4Q96JJ6 628 aa18.72■□□□□ 0.59
LSM2-214ENST00000493387 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
LSM2-214ENST00000493387 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
LSM2-214ENST00000493387 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
LSM2-214ENST00000493387 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
LSM2-214ENST00000493387 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.57
LSM2-214ENST00000493387 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
LSM2-214ENST00000493387 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
LSM2-214ENST00000493387 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
LSM2-214ENST00000493387 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
LSM2-214ENST00000493387 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
LSM2-214ENST00000493387 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
LSM2-214ENST00000493387 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
LSM2-214ENST00000493387 CLIP1P30622 1438 aa18.52■□□□□ 0.56
LSM2-214ENST00000493387 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
LSM2-214ENST00000493387 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
LSM2-214ENST00000493387 KIAA0556O60303 1618 aa18.5■□□□□ 0.55
LSM2-214ENST00000493387 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
LSM2-214ENST00000493387 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
LSM2-214ENST00000493387 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
LSM2-214ENST00000493387 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
LSM2-214ENST00000493387 PTPRGP23470 1445 aa18.47■□□□□ 0.55
LSM2-214ENST00000493387 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
LSM2-214ENST00000493387 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
LSM2-214ENST00000493387 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
LSM2-214ENST00000493387 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
LSM2-214ENST00000493387 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
LSM2-214ENST00000493387 ARAP1Q96P48 1450 aa18.39■□□□□ 0.54
LSM2-214ENST00000493387 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
LSM2-214ENST00000493387 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
LSM2-214ENST00000493387 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
LSM2-214ENST00000493387 UHRF1BP1LA0JNW5 1464 aa18.31■□□□□ 0.52
LSM2-214ENST00000493387 PLB1Q6P1J6 1458 aa18.29■□□□□ 0.52
LSM2-214ENST00000493387 ABCA8O94911 1581 aa18.29■□□□□ 0.52
LSM2-214ENST00000493387 VPS8Q8N3P4 1428 aa18.28■□□□□ 0.52
LSM2-214ENST00000493387 CASKIN1Q8WXD9 1431 aa18.27■□□□□ 0.52
LSM2-214ENST00000493387 ABCC2Q92887 1545 aa18.27■□□□□ 0.51
LSM2-214ENST00000493387 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
LSM2-214ENST00000493387 RAPGEF6Q8TEU7 1601 aa18.26■□□□□ 0.51
LSM2-214ENST00000493387 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
LSM2-214ENST00000493387 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
LSM2-214ENST00000493387 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.51
LSM2-214ENST00000493387 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
LSM2-214ENST00000493387 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
LSM2-214ENST00000493387 NUP153P49790 1475 aaKnown RBP18.2■□□□□ 0.5
LSM2-214ENST00000493387 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
LSM2-214ENST00000493387 PCF11O94913 1555 aaKnown RBP18.18■□□□□ 0.5
LSM2-214ENST00000493387 ATP10BO94823 1461 aa18.16■□□□□ 0.5
LSM2-214ENST00000493387 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
LSM2-214ENST00000493387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
LSM2-214ENST00000493387 APLP2Q06481 763 aa18.16■□□□□ 0.5
LSM2-214ENST00000493387 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
LSM2-214ENST00000493387 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
LSM2-214ENST00000493387 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
LSM2-214ENST00000493387 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
LSM2-214ENST00000493387 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
LSM2-214ENST00000493387 ZCCHC11Q5TAX3 1644 aaKnown RBP18.1■□□□□ 0.49
LSM2-214ENST00000493387 MAP3K1Q13233 1512 aa18.09■□□□□ 0.49
LSM2-214ENST00000493387 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.49
LSM2-214ENST00000493387 MAPKBP1O60336 1514 aa18.08■□□□□ 0.48
LSM2-214ENST00000493387 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
LSM2-214ENST00000493387 WDR7Q9Y4E6 1490 aa18.04■□□□□ 0.48
LSM2-214ENST00000493387 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
LSM2-214ENST00000493387 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
LSM2-214ENST00000493387 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
LSM2-214ENST00000493387 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.48
LSM2-214ENST00000493387 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
LSM2-214ENST00000493387 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
LSM2-214ENST00000493387 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
LSM2-214ENST00000493387 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
LSM2-214ENST00000493387 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
LSM2-214ENST00000493387 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
LSM2-214ENST00000493387 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
LSM2-214ENST00000493387 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
LSM2-214ENST00000493387 GLI2P10070 1586 aa17.91■□□□□ 0.46
LSM2-214ENST00000493387 KIF14Q15058 1648 aa17.91■□□□□ 0.46
LSM2-214ENST00000493387 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
LSM2-214ENST00000493387 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
LSM2-214ENST00000493387 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
LSM2-214ENST00000493387 SUPT6HQ7KZ85 1726 aaKnown RBP17.87■□□□□ 0.45
LSM2-214ENST00000493387 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
LSM2-214ENST00000493387 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
LSM2-214ENST00000493387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.86■□□□□ 0.453e-6■□□□□ 9.2
LSM2-214ENST00000493387 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
LSM2-214ENST00000493387 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
LSM2-214ENST00000493387 PLCH2O75038 1416 aa17.81■□□□□ 0.44
LSM2-214ENST00000493387 PPARGC1BQ86YN6 1023 aaKnown RBP17.81■□□□□ 0.44
LSM2-214ENST00000493387 TTC37Q6PGP7 1564 aa17.8■□□□□ 0.44
LSM2-214ENST00000493387 KIF13AQ9H1H9 1805 aa17.8■□□□□ 0.44
LSM2-214ENST00000493387 EFCAB2Q5VUJ9 269 aa17.8■□□□□ 0.44
LSM2-214ENST00000493387 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
LSM2-214ENST00000493387 ARAP3Q8WWN8 1544 aa17.79■□□□□ 0.44
LSM2-214ENST00000493387 GPATCH8Q9UKJ3 1502 aaKnown RBP17.79■□□□□ 0.44
LSM2-214ENST00000493387 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
LSM2-214ENST00000493387 TEX14Q8IWB6 1497 aa17.77■□□□□ 0.44
LSM2-214ENST00000493387 MYOM3Q5VTT5 1437 aa17.77■□□□□ 0.44
LSM2-214ENST00000493387 PHLDB1Q86UU1 1377 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms