RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 AEBP2Q6ZN18 517 aaPredicted RBP39.55■■■■□ 3.92
HMG20B-214ENST00000493191 KIF27Q86VH2 1401 aa39.51■■■■□ 3.92
HMG20B-214ENST00000493191 KIF13AQ9H1H9 1805 aa39.49■■■■□ 3.91
HMG20B-214ENST00000493191 KIAA0586Q9BVV6 1533 aa39.44■■■■□ 3.9
HMG20B-214ENST00000493191 CUL7Q14999 1698 aa39.41■■■■□ 3.9
HMG20B-214ENST00000493191 NPM1P06748 294 aaKnown RBP eCLIP39.41■■■■□ 3.9
HMG20B-214ENST00000493191 FAM69CQ0P6D2 419 aa39.33■■■■□ 3.89
HMG20B-214ENST00000493191 ADCY10Q96PN6 1610 aa39.32■■■■□ 3.89
HMG20B-214ENST00000493191 CARMIL1Q5VZK9 1371 aa39.29■■■■□ 3.88
HMG20B-214ENST00000493191 ABCC10Q5T3U5 1492 aa39.29■■■■□ 3.88
HMG20B-214ENST00000493191 MAPKBP1O60336 1514 aa39.26■■■■□ 3.88
HMG20B-214ENST00000493191 DIP2BQ9P265 1576 aa39.16■■■■□ 3.86
HMG20B-214ENST00000493191 TTBK1Q5TCY1 1321 aaPredicted RBP39.16■■■■□ 3.86
HMG20B-214ENST00000493191 PTPRGP23470 1445 aa39.14■■■■□ 3.86
HMG20B-214ENST00000493191 CARMIL2Q6F5E8 1435 aa39.06■■■■□ 3.84
HMG20B-214ENST00000493191 TNIKQ9UKE5 1360 aa39.04■■■■□ 3.84
HMG20B-214ENST00000493191 IQGAP2Q13576 1575 aa39.03■■■■□ 3.84
HMG20B-214ENST00000493191 TSPOAP1O95153 1857 aa38.99■■■■□ 3.83
HMG20B-214ENST00000493191 ABCC2Q92887 1545 aa38.92■■■■□ 3.82
HMG20B-214ENST00000493191 KDM6BO15054 1643 aa38.89■■■■□ 3.82
HMG20B-214ENST00000493191 RAPGEF2Q9Y4G8 1499 aa38.88■■■■□ 3.81
HMG20B-214ENST00000493191 DISP1Q96F81 1524 aa38.88■■■■□ 3.81
HMG20B-214ENST00000493191 ASXL2Q76L83 1435 aa38.83■■■■□ 3.81
HMG20B-214ENST00000493191 UACAQ9BZF9 1416 aa38.81■■■■□ 3.8
HMG20B-214ENST00000493191 UHRF1BP1LA0JNW5 1464 aa38.81■■■■□ 3.8
HMG20B-214ENST00000493191 PLB1Q6P1J6 1458 aa38.79■■■■□ 3.8
HMG20B-214ENST00000493191 UGGT2Q9NYU1 1516 aa38.77■■■■□ 3.8
HMG20B-214ENST00000493191 GLI2P10070 1586 aa38.69■■■■□ 3.78
HMG20B-214ENST00000493191 KIAA0556O60303 1618 aa38.67■■■■□ 3.78
HMG20B-214ENST00000493191 KDM5BQ9UGL1 1544 aa38.65■■■■□ 3.78
HMG20B-214ENST00000493191 KDM4FA0A1W2PPD8 638 aa38.64■■■■□ 3.78
HMG20B-214ENST00000493191 PPRC1Q5VV67 1664 aaKnown RBP38.64■■■■□ 3.78
HMG20B-214ENST00000493191 EPRSP07814 1512 aaKnown RBP38.58■■■■□ 3.77
HMG20B-214ENST00000493191 ZCCHC11Q5TAX3 1644 aaKnown RBP38.58■■■■□ 3.77
HMG20B-214ENST00000493191 CTTNBP2Q8WZ74 1663 aa38.55■■■■□ 3.76
HMG20B-214ENST00000493191 MAP3K4Q9Y6R4 1608 aa38.49■■■■□ 3.75
HMG20B-214ENST00000493191 GOLGA3Q08378 1498 aa38.44■■■■□ 3.74
HMG20B-214ENST00000493191 PRXQ9BXM0 1461 aa38.43■■■■□ 3.74
HMG20B-214ENST00000493191 COL17A1Q9UMD9 1497 aaPredicted RBP38.43■■■■□ 3.74
HMG20B-214ENST00000493191 WDR7Q9Y4E6 1490 aa38.41■■■■□ 3.74
HMG20B-214ENST00000493191 TEX14Q8IWB6 1497 aa38.39■■■■□ 3.74
HMG20B-214ENST00000493191 ABCA8O94911 1581 aa38.33■■■■□ 3.73
HMG20B-214ENST00000493191 KCNH8Q96L42 1107 aa38.31■■■■□ 3.72
HMG20B-214ENST00000493191 ADGRL1O94910 1474 aa38.25■■■■□ 3.71
HMG20B-214ENST00000493191 P3H3Q8IVL6 736 aa38.22■■■■□ 3.71
HMG20B-214ENST00000493191 CD109Q6YHK3 1445 aa38.21■■■■□ 3.71
HMG20B-214ENST00000493191 ARID3CA6NKF2 412 aa38.17■■■■□ 3.7
HMG20B-214ENST00000493191 CFAP43Q8NDM7 1665 aa38.16■■■■□ 3.7
HMG20B-214ENST00000493191 CSRNP3Q8WYN3 585 aa38.15■■■■□ 3.7
HMG20B-214ENST00000493191 MAGI3Q5TCQ9 1506 aa38.15■■■■□ 3.7
HMG20B-214ENST00000493191 FAM9AQ8IZU1 332 aaPredicted RBP38.14■■■■□ 3.7
HMG20B-214ENST00000493191 ATP10BO94823 1461 aa38.05■■■■□ 3.68
HMG20B-214ENST00000493191 SAMD9Q5K651 1589 aa37.98■■■■□ 3.67
HMG20B-214ENST00000493191 RANGAP1P46060 587 aaPredicted RBP37.94■■■■□ 3.66
HMG20B-214ENST00000493191 RAPGEF6Q8TEU7 1601 aa37.9■■■■□ 3.66
HMG20B-214ENST00000493191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.89■■■■□ 3.66
HMG20B-214ENST00000493191 HNRNPUL2Q1KMD3 747 aaKnown RBP37.89■■■■□ 3.66
HMG20B-214ENST00000493191 ARAP3Q8WWN8 1544 aa37.87■■■■□ 3.65
HMG20B-214ENST00000493191 EEA1Q15075 1411 aa37.87■■■■□ 3.65
HMG20B-214ENST00000493191 ABCA9Q8IUA7 1624 aa37.85■■■■□ 3.65
HMG20B-214ENST00000493191 KIF21BO75037 1637 aa37.8■■■■□ 3.64
HMG20B-214ENST00000493191 FHOD3Q2V2M9 1422 aa37.79■■■■□ 3.64
HMG20B-214ENST00000493191 NUP153P49790 1475 aaKnown RBP37.77■■■■□ 3.64
HMG20B-214ENST00000493191 HECW2Q9P2P5 1572 aa37.77■■■■□ 3.64
HMG20B-214ENST00000493191 PHLDB1Q86UU1 1377 aa37.76■■■■□ 3.64
HMG20B-214ENST00000493191 RAPGEF3O95398 923 aa37.72■■■■□ 3.63
HMG20B-214ENST00000493191 NEO1Q92859 1461 aa37.67■■■■□ 3.62
HMG20B-214ENST00000493191 ILDR1Q86SU0 546 aaPredicted RBP37.65■■■■□ 3.62
HMG20B-214ENST00000493191 PLEKHD1A6NEE1 506 aa37.64■■■■□ 3.62
HMG20B-214ENST00000493191 EFCAB5A4FU69 1503 aa37.56■■■■□ 3.6
HMG20B-214ENST00000493191 FRMPD1Q5SYB0 1578 aa37.54■■■■□ 3.6
HMG20B-214ENST00000493191 EHMT2Q96KQ7 1210 aa37.53■■■■□ 3.6
HMG20B-214ENST00000493191 ADAMTSL3P82987 1691 aa37.48■■■■□ 3.59
HMG20B-214ENST00000493191 ARID4BQ4LE39 1312 aaPredicted RBP37.47■■■■□ 3.59
HMG20B-214ENST00000493191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.46■■■■□ 3.59
HMG20B-214ENST00000493191 PTPRMP28827 1452 aa37.45■■■■□ 3.59
HMG20B-214ENST00000493191 AKNAQ7Z591 1439 aa37.44■■■■□ 3.58
HMG20B-214ENST00000493191 UBTFP17480 764 aaKnown RBP37.44■■■■□ 3.58
HMG20B-214ENST00000493191 FANCAO15360 1455 aa37.44■■■■□ 3.58
HMG20B-214ENST00000493191 DENND4BO75064 1496 aaPredicted RBP37.43■■■■□ 3.58
HMG20B-214ENST00000493191 CDK13Q14004 1512 aaKnown RBP37.41■■■■□ 3.58
HMG20B-214ENST00000493191 TTC37Q6PGP7 1564 aa37.4■■■■□ 3.58
HMG20B-214ENST00000493191 BCORL1Q5H9F3 1711 aa37.39■■■■□ 3.58
HMG20B-214ENST00000493191 RICTORQ6R327 1708 aa37.39■■■■□ 3.58
HMG20B-214ENST00000493191 CFAP74Q9C0B2 1584 aa37.36■■■■□ 3.57
HMG20B-214ENST00000493191 ATP1B4Q9UN42 357 aaPredicted RBP37.35■■■■□ 3.57
HMG20B-214ENST00000493191 ARHGEF40Q8TER5 1519 aa37.34■■■■□ 3.57
HMG20B-214ENST00000493191 MADDQ8WXG6 1647 aa37.32■■■■□ 3.57
HMG20B-214ENST00000493191 CHIC1Q5VXU3 224 aa37.31■■■■□ 3.56
HMG20B-214ENST00000493191 FMN1Q68DA7 1419 aa37.27■■■■□ 3.56
HMG20B-214ENST00000493191 ARHGAP35Q9NRY4 1499 aa37.26■■■■□ 3.55
HMG20B-214ENST00000493191 PLCH2O75038 1416 aa37.23■■■■□ 3.55
HMG20B-214ENST00000493191 ZMYM4Q5VZL5 1548 aa37.22■■■■□ 3.55
HMG20B-214ENST00000493191 HECW1Q76N89 1606 aa37.21■■■■□ 3.55
HMG20B-214ENST00000493191 YEATS2Q9ULM3 1422 aa37.21■■■■□ 3.55
HMG20B-214ENST00000493191 ZFYVE16Q7Z3T8 1539 aa37.2■■■■□ 3.55
HMG20B-214ENST00000493191 RIMS1Q86UR5 1692 aaKnown RBP37.19■■■■□ 3.54
HMG20B-214ENST00000493191 SCAPERQ9BY12 1400 aa37.19■■■■□ 3.54
HMG20B-214ENST00000493191 CDK11AQ9UQ88 783 aaPredicted RBP37.17■■■■□ 3.54
HMG20B-214ENST00000493191 MAGI2Q86UL8 1455 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms