RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
HDAC3-212ENST00000492407 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
HDAC3-212ENST00000492407 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
HDAC3-212ENST00000492407 CUL7Q14999 1698 aa15.91■□□□□ 0.14
HDAC3-212ENST00000492407 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
HDAC3-212ENST00000492407 MAPKBP1O60336 1514 aa15.86■□□□□ 0.13
HDAC3-212ENST00000492407 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
HDAC3-212ENST00000492407 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
HDAC3-212ENST00000492407 FAM69CQ0P6D2 419 aa15.82■□□□□ 0.12
HDAC3-212ENST00000492407 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
HDAC3-212ENST00000492407 PTPRGP23470 1445 aa15.8■□□□□ 0.12
HDAC3-212ENST00000492407 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
HDAC3-212ENST00000492407 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
HDAC3-212ENST00000492407 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
HDAC3-212ENST00000492407 DIP2BQ9P265 1576 aa15.74■□□□□ 0.11
HDAC3-212ENST00000492407 UHRF1BP1LA0JNW5 1464 aa15.72■□□□□ 0.11
HDAC3-212ENST00000492407 RAPGEF2Q9Y4G8 1499 aa15.72■□□□□ 0.11
HDAC3-212ENST00000492407 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
HDAC3-212ENST00000492407 ABCC2Q92887 1545 aa15.71■□□□□ 0.11
HDAC3-212ENST00000492407 PLB1Q6P1J6 1458 aa15.69■□□□□ 0.1
HDAC3-212ENST00000492407 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
HDAC3-212ENST00000492407 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
HDAC3-212ENST00000492407 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
HDAC3-212ENST00000492407 ASXL2Q76L83 1435 aa15.64■□□□□ 0.09
HDAC3-212ENST00000492407 GLI2P10070 1586 aa15.63■□□□□ 0.09
HDAC3-212ENST00000492407 KDM5BQ9UGL1 1544 aa15.62■□□□□ 0.09
HDAC3-212ENST00000492407 TTBK1Q5TCY1 1321 aaPredicted RBP15.61■□□□□ 0.09
HDAC3-212ENST00000492407 KDM6BO15054 1643 aa15.61■□□□□ 0.09
HDAC3-212ENST00000492407 GOLGA3Q08378 1498 aa15.59■□□□□ 0.09
HDAC3-212ENST00000492407 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
HDAC3-212ENST00000492407 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
HDAC3-212ENST00000492407 EPRSP07814 1512 aaKnown RBP15.55■□□□□ 0.08
HDAC3-212ENST00000492407 FAM9AQ8IZU1 332 aaPredicted RBP15.53■□□□□ 0.08
HDAC3-212ENST00000492407 TEX14Q8IWB6 1497 aa15.52■□□□□ 0.08
HDAC3-212ENST00000492407 KDM4FA0A1W2PPD8 638 aa15.5■□□□□ 0.07
HDAC3-212ENST00000492407 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
HDAC3-212ENST00000492407 WDR7Q9Y4E6 1490 aa15.48■□□□□ 0.07
HDAC3-212ENST00000492407 ZCCHC11Q5TAX3 1644 aaKnown RBP15.48■□□□□ 0.07
HDAC3-212ENST00000492407 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
HDAC3-212ENST00000492407 CTTNBP2Q8WZ74 1663 aa15.48■□□□□ 0.07
HDAC3-212ENST00000492407 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
HDAC3-212ENST00000492407 ABCA8O94911 1581 aa15.45■□□□□ 0.06
HDAC3-212ENST00000492407 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
HDAC3-212ENST00000492407 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
HDAC3-212ENST00000492407 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
HDAC3-212ENST00000492407 EEA1Q15075 1411 aa15.42■□□□□ 0.06
HDAC3-212ENST00000492407 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
HDAC3-212ENST00000492407 KCNH8Q96L42 1107 aa15.38■□□□□ 0.05
HDAC3-212ENST00000492407 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
HDAC3-212ENST00000492407 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
HDAC3-212ENST00000492407 ATP10BO94823 1461 aa15.34■□□□□ 0.05
HDAC3-212ENST00000492407 ADGRL1O94910 1474 aa15.34■□□□□ 0.05
HDAC3-212ENST00000492407 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
HDAC3-212ENST00000492407 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
HDAC3-212ENST00000492407 ARAP3Q8WWN8 1544 aa15.32■□□□□ 0.04
HDAC3-212ENST00000492407 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
HDAC3-212ENST00000492407 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
HDAC3-212ENST00000492407 NEO1Q92859 1461 aa15.25■□□□□ 0.03
HDAC3-212ENST00000492407 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
HDAC3-212ENST00000492407 ARID3CA6NKF2 412 aa15.23■□□□□ 0.03
HDAC3-212ENST00000492407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
HDAC3-212ENST00000492407 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
HDAC3-212ENST00000492407 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
HDAC3-212ENST00000492407 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
HDAC3-212ENST00000492407 KIF21BO75037 1637 aa15.2■□□□□ 0.02
HDAC3-212ENST00000492407 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
HDAC3-212ENST00000492407 RAPGEF3O95398 923 aa15.15■□□□□ 0.02
HDAC3-212ENST00000492407 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
HDAC3-212ENST00000492407 HECW2Q9P2P5 1572 aa15.11■□□□□ 0.01
HDAC3-212ENST00000492407 FMN1Q68DA7 1419 aa15.11■□□□□ 0.01
HDAC3-212ENST00000492407 AKNAQ7Z591 1439 aa15.11■□□□□ 0.01
HDAC3-212ENST00000492407 DENND4BO75064 1496 aaPredicted RBP15.11■□□□□ 0.01
HDAC3-212ENST00000492407 UBTFP17480 764 aaKnown RBP15.1■□□□□ 0.01
HDAC3-212ENST00000492407 FANCAO15360 1455 aa15.09■□□□□ 0.01
HDAC3-212ENST00000492407 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-212ENST00000492407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0.01
HDAC3-212ENST00000492407 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
HDAC3-212ENST00000492407 CHIC1Q5VXU3 224 aa15.08■□□□□ 0
HDAC3-212ENST00000492407 MAGI2Q86UL8 1455 aa15.07■□□□□ 0
HDAC3-212ENST00000492407 FRMPD1Q5SYB0 1578 aa15.07■□□□□ 0
HDAC3-212ENST00000492407 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
HDAC3-212ENST00000492407 PLCH2O75038 1416 aa15.06■□□□□ 0
HDAC3-212ENST00000492407 PTPRMP28827 1452 aa15.06■□□□□ 0
HDAC3-212ENST00000492407 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ -0
HDAC3-212ENST00000492407 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
HDAC3-212ENST00000492407 ZMYM4Q5VZL5 1548 aa15.03■□□□□ -0
HDAC3-212ENST00000492407 POGZQ7Z3K3 1410 aa15.03■□□□□ -0
HDAC3-212ENST00000492407 ARHGEF40Q8TER5 1519 aa15.02■□□□□ -0
HDAC3-212ENST00000492407 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
HDAC3-212ENST00000492407 EFCAB2Q5VUJ9 269 aa15.02■□□□□ -0
HDAC3-212ENST00000492407 BCORL1Q5H9F3 1711 aa15.01□□□□□ -0.01
HDAC3-212ENST00000492407 HECW1Q76N89 1606 aa15.01□□□□□ -0.01
HDAC3-212ENST00000492407 TTC37Q6PGP7 1564 aa15.01□□□□□ -0.01
HDAC3-212ENST00000492407 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
HDAC3-212ENST00000492407 RICTORQ6R327 1708 aa15□□□□□ -0.01
HDAC3-212ENST00000492407 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
HDAC3-212ENST00000492407 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
HDAC3-212ENST00000492407 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
HDAC3-212ENST00000492407 TROQ12816 1431 aaPredicted RBP14.98□□□□□ -0.01
HDAC3-212ENST00000492407 CLIP1P30622 1438 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms