RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 JPH4Q96JJ6 628 aa25.98■■□□□ 1.75
CDC42SE1-205ENST00000491825 CUL7Q14999 1698 aa25.9■■□□□ 1.74
CDC42SE1-205ENST00000491825 KIAA0586Q9BVV6 1533 aa25.88■■□□□ 1.73
CDC42SE1-205ENST00000491825 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
CDC42SE1-205ENST00000491825 ADCY10Q96PN6 1610 aa25.72■■□□□ 1.71
CDC42SE1-205ENST00000491825 MAPKBP1O60336 1514 aa25.71■■□□□ 1.71
CDC42SE1-205ENST00000491825 KIF13AQ9H1H9 1805 aa25.7■■□□□ 1.7
CDC42SE1-205ENST00000491825 ABCC10Q5T3U5 1492 aa25.67■■□□□ 1.7
CDC42SE1-205ENST00000491825 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
CDC42SE1-205ENST00000491825 NPM1P06748 294 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDC42SE1-205ENST00000491825 PTPRGP23470 1445 aa25.6■■□□□ 1.69
CDC42SE1-205ENST00000491825 DIP2BQ9P265 1576 aa25.6■■□□□ 1.69
CDC42SE1-205ENST00000491825 TNIKQ9UKE5 1360 aa25.57■■□□□ 1.68
CDC42SE1-205ENST00000491825 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
CDC42SE1-205ENST00000491825 FAM69CQ0P6D2 419 aa25.57■■□□□ 1.68
CDC42SE1-205ENST00000491825 RAPGEF2Q9Y4G8 1499 aa25.57■■□□□ 1.68
CDC42SE1-205ENST00000491825 DISP1Q96F81 1524 aa25.54■■□□□ 1.68
CDC42SE1-205ENST00000491825 ABCC2Q92887 1545 aa25.5■■□□□ 1.67
CDC42SE1-205ENST00000491825 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
CDC42SE1-205ENST00000491825 UHRF1BP1LA0JNW5 1464 aa25.47■■□□□ 1.67
CDC42SE1-205ENST00000491825 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
CDC42SE1-205ENST00000491825 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
CDC42SE1-205ENST00000491825 KIAA0556O60303 1618 aa25.41■■□□□ 1.66
CDC42SE1-205ENST00000491825 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
CDC42SE1-205ENST00000491825 ASXL2Q76L83 1435 aa25.39■■□□□ 1.66
CDC42SE1-205ENST00000491825 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
CDC42SE1-205ENST00000491825 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
CDC42SE1-205ENST00000491825 KDM5BQ9UGL1 1544 aa25.36■■□□□ 1.65
CDC42SE1-205ENST00000491825 GLI2P10070 1586 aa25.33■■□□□ 1.65
CDC42SE1-205ENST00000491825 KDM6BO15054 1643 aa25.32■■□□□ 1.64
CDC42SE1-205ENST00000491825 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
CDC42SE1-205ENST00000491825 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
CDC42SE1-205ENST00000491825 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
CDC42SE1-205ENST00000491825 EPRSP07814 1512 aaKnown RBP25.25■■□□□ 1.63
CDC42SE1-205ENST00000491825 PPRC1Q5VV67 1664 aaKnown RBP25.25■■□□□ 1.63
CDC42SE1-205ENST00000491825 ZCCHC11Q5TAX3 1644 aaKnown RBP25.24■■□□□ 1.63
CDC42SE1-205ENST00000491825 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
CDC42SE1-205ENST00000491825 ABCA8O94911 1581 aa25.18■■□□□ 1.62
CDC42SE1-205ENST00000491825 MAP3K4Q9Y6R4 1608 aa25.17■■□□□ 1.62
CDC42SE1-205ENST00000491825 WDR7Q9Y4E6 1490 aa25.16■■□□□ 1.62
CDC42SE1-205ENST00000491825 COL17A1Q9UMD9 1497 aaPredicted RBP25.12■■□□□ 1.61
CDC42SE1-205ENST00000491825 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
CDC42SE1-205ENST00000491825 EEA1Q15075 1411 aa25.09■■□□□ 1.61
CDC42SE1-205ENST00000491825 KDM4FA0A1W2PPD8 638 aa25.08■■□□□ 1.61
CDC42SE1-205ENST00000491825 TEX14Q8IWB6 1497 aa25.08■■□□□ 1.6
CDC42SE1-205ENST00000491825 SAMD9Q5K651 1589 aa25.03■■□□□ 1.6
CDC42SE1-205ENST00000491825 MAGI3Q5TCQ9 1506 aa24.99■■□□□ 1.59
CDC42SE1-205ENST00000491825 CD109Q6YHK3 1445 aa24.97■■□□□ 1.59
CDC42SE1-205ENST00000491825 P3H3Q8IVL6 736 aa24.97■■□□□ 1.59
CDC42SE1-205ENST00000491825 ATP10BO94823 1461 aa24.96■■□□□ 1.59
CDC42SE1-205ENST00000491825 CFAP43Q8NDM7 1665 aa24.96■■□□□ 1.59
CDC42SE1-205ENST00000491825 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
CDC42SE1-205ENST00000491825 ARID3CA6NKF2 412 aa24.89■■□□□ 1.58
CDC42SE1-205ENST00000491825 ADGRL1O94910 1474 aa24.89■■□□□ 1.57
CDC42SE1-205ENST00000491825 RAPGEF6Q8TEU7 1601 aa24.87■■□□□ 1.57
CDC42SE1-205ENST00000491825 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
CDC42SE1-205ENST00000491825 KIF21BO75037 1637 aa24.85■■□□□ 1.57
CDC42SE1-205ENST00000491825 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
CDC42SE1-205ENST00000491825 NUP153P49790 1475 aaKnown RBP24.84■■□□□ 1.57
CDC42SE1-205ENST00000491825 ABCA9Q8IUA7 1624 aa24.82■■□□□ 1.56
CDC42SE1-205ENST00000491825 ARAP3Q8WWN8 1544 aa24.8■■□□□ 1.56
CDC42SE1-205ENST00000491825 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
CDC42SE1-205ENST00000491825 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
CDC42SE1-205ENST00000491825 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
CDC42SE1-205ENST00000491825 NEO1Q92859 1461 aa24.69■■□□□ 1.54
CDC42SE1-205ENST00000491825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
CDC42SE1-205ENST00000491825 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
CDC42SE1-205ENST00000491825 FRMPD1Q5SYB0 1578 aa24.62■■□□□ 1.53
CDC42SE1-205ENST00000491825 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
CDC42SE1-205ENST00000491825 RAPGEF3O95398 923 aa24.6■■□□□ 1.53
CDC42SE1-205ENST00000491825 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.53
CDC42SE1-205ENST00000491825 CDK13Q14004 1512 aaKnown RBP24.58■■□□□ 1.53
CDC42SE1-205ENST00000491825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.58■■□□□ 1.534e-7■■□□□ 13.5
CDC42SE1-205ENST00000491825 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
CDC42SE1-205ENST00000491825 TTC37Q6PGP7 1564 aa24.54■■□□□ 1.52
CDC42SE1-205ENST00000491825 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
CDC42SE1-205ENST00000491825 FMN1Q68DA7 1419 aa24.53■■□□□ 1.52
CDC42SE1-205ENST00000491825 FANCAO15360 1455 aa24.52■■□□□ 1.52
CDC42SE1-205ENST00000491825 HECW2Q9P2P5 1572 aa24.52■■□□□ 1.52
CDC42SE1-205ENST00000491825 AKNAQ7Z591 1439 aa24.51■■□□□ 1.51
CDC42SE1-205ENST00000491825 DENND4BO75064 1496 aaPredicted RBP24.49■■□□□ 1.51
CDC42SE1-205ENST00000491825 HECW1Q76N89 1606 aa24.49■■□□□ 1.51
CDC42SE1-205ENST00000491825 CFAP74Q9C0B2 1584 aa24.47■■□□□ 1.51
CDC42SE1-205ENST00000491825 ARHGEF40Q8TER5 1519 aa24.47■■□□□ 1.51
CDC42SE1-205ENST00000491825 RICTORQ6R327 1708 aa24.47■■□□□ 1.51
CDC42SE1-205ENST00000491825 ADAMTSL3P82987 1691 aa24.46■■□□□ 1.51
CDC42SE1-205ENST00000491825 ZMYM4Q5VZL5 1548 aa24.43■■□□□ 1.5
CDC42SE1-205ENST00000491825 PLCH2O75038 1416 aa24.43■■□□□ 1.5
CDC42SE1-205ENST00000491825 PTPRMP28827 1452 aa24.41■■□□□ 1.5
CDC42SE1-205ENST00000491825 BCORL1Q5H9F3 1711 aa24.39■■□□□ 1.5
CDC42SE1-205ENST00000491825 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
CDC42SE1-205ENST00000491825 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
CDC42SE1-205ENST00000491825 POGZQ7Z3K3 1410 aa24.36■■□□□ 1.49
CDC42SE1-205ENST00000491825 YEATS2Q9ULM3 1422 aa24.35■■□□□ 1.49
CDC42SE1-205ENST00000491825 KIF14Q15058 1648 aa24.35■■□□□ 1.49
CDC42SE1-205ENST00000491825 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
CDC42SE1-205ENST00000491825 MAGI2Q86UL8 1455 aa24.34■■□□□ 1.49
CDC42SE1-205ENST00000491825 CDK11AQ9UQ88 783 aaPredicted RBP24.34■■□□□ 1.49
CDC42SE1-205ENST00000491825 ZFYVE16Q7Z3T8 1539 aa24.34■■□□□ 1.49
CDC42SE1-205ENST00000491825 SCAPERQ9BY12 1400 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms