RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PCGF6Q9BYE7 350 aa36.3■■■■□ 3.4
USF3-203ENST00000491165 CTTNBP2Q8WZ74 1663 aa36.29■■■■□ 3.4
USF3-203ENST00000491165 TNIKQ9UKE5 1360 aa36.27■■■■□ 3.4
USF3-203ENST00000491165 NUP160Q12769 1436 aa36.25■■■■□ 3.39
USF3-203ENST00000491165 RANGAP1P46060 587 aaPredicted RBP36.13■■■■□ 3.37
USF3-203ENST00000491165 KIAA0586Q9BVV6 1533 aa36.11■■■■□ 3.37
USF3-203ENST00000491165 IQGAP2Q13576 1575 aa36.11■■■■□ 3.37
USF3-203ENST00000491165 CEP162Q5TB80 1403 aa36.07■■■■□ 3.36
USF3-203ENST00000491165 CLASP1Q7Z460 1538 aa36.02■■■■□ 3.36
USF3-203ENST00000491165 OSCARQ8IYS5 282 aa35.96■■■■□ 3.35
USF3-203ENST00000491165 CLIP1P30622 1438 aa35.95■■■■□ 3.35
USF3-203ENST00000491165 ARHGAP35Q9NRY4 1499 aa35.91■■■■□ 3.34
USF3-203ENST00000491165 UGGT2Q9NYU1 1516 aa35.91■■■■□ 3.34
USF3-203ENST00000491165 JPH4Q96JJ6 628 aa35.9■■■■□ 3.34
USF3-203ENST00000491165 SHROOM2Q13796 1616 aa35.88■■■■□ 3.33
USF3-203ENST00000491165 SAMD9Q5K651 1589 aa35.87■■■■□ 3.33
USF3-203ENST00000491165 DISP1Q96F81 1524 aa35.84■■■■□ 3.33
USF3-203ENST00000491165 P3H3Q8IVL6 736 aa35.83■■■■□ 3.33
USF3-203ENST00000491165 ARAP1Q96P48 1450 aa35.8■■■■□ 3.32
USF3-203ENST00000491165 EFCAB5A4FU69 1503 aa35.79■■■■□ 3.32
USF3-203ENST00000491165 ERCC6L2Q5T890 1561 aa35.78■■■■□ 3.32
USF3-203ENST00000491165 KIAA0556O60303 1618 aa35.77■■■■□ 3.32
USF3-203ENST00000491165 PRG4Q92954 1404 aaPredicted RBP35.76■■■■□ 3.31
USF3-203ENST00000491165 FHOD3Q2V2M9 1422 aa35.75■■■■□ 3.31
USF3-203ENST00000491165 TRIM26Q12899 539 aaPredicted RBP35.71■■■■□ 3.31
USF3-203ENST00000491165 CARMIL2Q6F5E8 1435 aa35.63■■■■□ 3.29
USF3-203ENST00000491165 TTBK1Q5TCY1 1321 aaPredicted RBP35.57■■■■□ 3.28
USF3-203ENST00000491165 PPARGC1BQ86YN6 1023 aaKnown RBP35.53■■■■□ 3.28
USF3-203ENST00000491165 VPS8Q8N3P4 1428 aa35.52■■■■□ 3.28
USF3-203ENST00000491165 ARHGEF11O15085 1522 aa35.47■■■■□ 3.27
USF3-203ENST00000491165 PCF11O94913 1555 aaKnown RBP35.44■■■■□ 3.26
USF3-203ENST00000491165 FMN1Q68DA7 1419 aa35.44■■■■□ 3.26
USF3-203ENST00000491165 PTPRGP23470 1445 aa35.41■■■■□ 3.26
USF3-203ENST00000491165 PLB1Q6P1J6 1458 aa35.39■■■■□ 3.26
USF3-203ENST00000491165 RIMBP3CA6NJZ7 1639 aa35.38■■■■□ 3.25
USF3-203ENST00000491165 RIMBP3BA6NNM3 1639 aa35.38■■■■□ 3.25
USF3-203ENST00000491165 RIMBP3Q9UFD9 1639 aa35.38■■■■□ 3.25
USF3-203ENST00000491165 LRRIQ1Q96JM4 1722 aa35.32■■■■□ 3.25
USF3-203ENST00000491165 CASKIN1Q8WXD9 1431 aa35.32■■■■□ 3.24
USF3-203ENST00000491165 RAPGEF6Q8TEU7 1601 aa35.31■■■■□ 3.24
USF3-203ENST00000491165 ABCA8O94911 1581 aa35.3■■■■□ 3.24
USF3-203ENST00000491165 FYCO1Q9BQS8 1478 aa35.28■■■■□ 3.24
USF3-203ENST00000491165 ATP1B4Q9UN42 357 aaPredicted RBP35.26■■■■□ 3.24
USF3-203ENST00000491165 NUP153P49790 1475 aaKnown RBP35.23■■■■□ 3.23
USF3-203ENST00000491165 UACAQ9BZF9 1416 aa35.21■■■■□ 3.23
USF3-203ENST00000491165 HECW1Q76N89 1606 aa35.21■■■■□ 3.23
USF3-203ENST00000491165 ARID3CA6NKF2 412 aa35.2■■■■□ 3.23
USF3-203ENST00000491165 ABCC2Q92887 1545 aa35.15■■■■□ 3.22
USF3-203ENST00000491165 ADCY10Q96PN6 1610 aa35.15■■■■□ 3.22
USF3-203ENST00000491165 CDK13Q14004 1512 aaKnown RBP35.14■■■■□ 3.22
USF3-203ENST00000491165 EPRSP07814 1512 aaKnown RBP35.13■■■■□ 3.21
USF3-203ENST00000491165 CYB5RLQ6IPT4 315 aa35.11■■■■□ 3.21
USF3-203ENST00000491165 TIAM1Q13009 1591 aa35.09■■■■□ 3.21
USF3-203ENST00000491165 CFAP43Q8NDM7 1665 aa35.09■■■■□ 3.21
USF3-203ENST00000491165 UHRF1BP1LA0JNW5 1464 aa35.08■■■■□ 3.21
USF3-203ENST00000491165 ZEB1P37275 1124 aaPredicted RBP35.05■■■■□ 3.2
USF3-203ENST00000491165 ATP10BO94823 1461 aa35.04■■■■□ 3.2
USF3-203ENST00000491165 DNAJC5Q9H3Z4 198 aa35.03■■■■□ 3.2
USF3-203ENST00000491165 KANK4Q5T7N3 995 aaPredicted RBP35.02■■■■□ 3.2
USF3-203ENST00000491165 CCDC18Q5T9S5 1454 aa35.02■■■■□ 3.2
USF3-203ENST00000491165 MAP3K1Q13233 1512 aa35■■■■□ 3.19
USF3-203ENST00000491165 APLP2Q06481 763 aa35■■■■□ 3.19
USF3-203ENST00000491165 MAGI3Q5TCQ9 1506 aa34.98■■■■□ 3.19
USF3-203ENST00000491165 ZCCHC11Q5TAX3 1644 aaKnown RBP34.98■■■■□ 3.19
USF3-203ENST00000491165 KDM5BQ9UGL1 1544 aa34.97■■■■□ 3.19
USF3-203ENST00000491165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.94■■■■□ 3.18
USF3-203ENST00000491165 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
USF3-203ENST00000491165 LRRC9Q6ZRR7 1453 aa34.92■■■■□ 3.18
USF3-203ENST00000491165 MTUS2Q5JR59 1369 aa34.81■■■■□ 3.16
USF3-203ENST00000491165 EHBP1L1Q8N3D4 1523 aa34.78■■■■□ 3.16
USF3-203ENST00000491165 TROQ12816 1431 aaPredicted RBP34.74■■■■□ 3.15
USF3-203ENST00000491165 CDK11AQ9UQ88 783 aaPredicted RBP34.73■■■■□ 3.15
USF3-203ENST00000491165 KIF14Q15058 1648 aa34.72■■■■□ 3.15
USF3-203ENST00000491165 PLEKHD1A6NEE1 506 aa34.72■■■■□ 3.15
USF3-203ENST00000491165 NPM1P06748 294 aaKnown RBP eCLIP34.7■■■■□ 3.15
USF3-203ENST00000491165 ASXL2Q76L83 1435 aa34.7■■■■□ 3.14
USF3-203ENST00000491165 SUPT6HQ7KZ85 1726 aaKnown RBP34.67■■■■□ 3.14
USF3-203ENST00000491165 WDR7Q9Y4E6 1490 aa34.65■■■■□ 3.14
USF3-203ENST00000491165 NCOA2Q15596 1464 aa34.64■■■■□ 3.14
USF3-203ENST00000491165 MAPKBP1O60336 1514 aa34.62■■■■□ 3.13
USF3-203ENST00000491165 KCNH8Q96L42 1107 aa34.6■■■■□ 3.13
USF3-203ENST00000491165 PHLDB1Q86UU1 1377 aa34.59■■■■□ 3.13
USF3-203ENST00000491165 ABCC10Q5T3U5 1492 aa34.54■■■■□ 3.12
USF3-203ENST00000491165 TTC37Q6PGP7 1564 aa34.54■■■■□ 3.12
USF3-203ENST00000491165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.54■■■■□ 3.12
USF3-203ENST00000491165 CDC42BPAQ5VT25 1732 aa34.46■■■■□ 3.11
USF3-203ENST00000491165 GPATCH8Q9UKJ3 1502 aaKnown RBP34.42■■■■□ 3.1
USF3-203ENST00000491165 MYOM3Q5VTT5 1437 aa34.42■■■■□ 3.1
USF3-203ENST00000491165 ABCA9Q8IUA7 1624 aa34.41■■■■□ 3.1
USF3-203ENST00000491165 CCNB3Q8WWL7 1395 aa34.41■■■■□ 3.1
USF3-203ENST00000491165 DIP2BQ9P265 1576 aa34.39■■■■□ 3.1
USF3-203ENST00000491165 CDC42BPBQ9Y5S2 1711 aa34.38■■■■□ 3.09
USF3-203ENST00000491165 MYO5CQ9NQX4 1742 aa34.36■■■■□ 3.09
USF3-203ENST00000491165 FGD6Q6ZV73 1430 aa34.35■■■■□ 3.09
USF3-203ENST00000491165 ITSN2Q9NZM3 1697 aa34.35■■■■□ 3.09
USF3-203ENST00000491165 PREX2Q70Z35 1606 aa34.35■■■■□ 3.09
USF3-203ENST00000491165 RRBP1Q9P2E9 1410 aaKnown RBP34.34■■■■□ 3.09
USF3-203ENST00000491165 KIF13AQ9H1H9 1805 aa34.32■■■■□ 3.08
USF3-203ENST00000491165 GLI2P10070 1586 aa34.28■■■■□ 3.08
USF3-203ENST00000491165 PTPN23Q9H3S7 1636 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms