RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 CUL7Q14999 1698 aa27.63■■■□□ 2.01
ARHGEF39-206ENST00000490970 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
ARHGEF39-206ENST00000490970 CARMIL1Q5VZK9 1371 aa27.6■■■□□ 2.01
ARHGEF39-206ENST00000490970 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
ARHGEF39-206ENST00000490970 RAPGEF2Q9Y4G8 1499 aa27.36■■□□□ 1.97
ARHGEF39-206ENST00000490970 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
ARHGEF39-206ENST00000490970 IQGAP2Q13576 1575 aa27.31■■□□□ 1.96
ARHGEF39-206ENST00000490970 NPM1P06748 294 aaKnown RBP eCLIP27.28■■□□□ 1.96
ARHGEF39-206ENST00000490970 PTPRGP23470 1445 aa27.26■■□□□ 1.95
ARHGEF39-206ENST00000490970 CARMIL2Q6F5E8 1435 aa27.26■■□□□ 1.95
ARHGEF39-206ENST00000490970 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
ARHGEF39-206ENST00000490970 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
ARHGEF39-206ENST00000490970 DISP1Q96F81 1524 aa27.18■■□□□ 1.94
ARHGEF39-206ENST00000490970 PRXQ9BXM0 1461 aa27.16■■□□□ 1.94
ARHGEF39-206ENST00000490970 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
ARHGEF39-206ENST00000490970 UGGT2Q9NYU1 1516 aa27.15■■□□□ 1.94
ARHGEF39-206ENST00000490970 MAPKBP1O60336 1514 aa27.14■■□□□ 1.94
ARHGEF39-206ENST00000490970 FAM69CQ0P6D2 419 aa27.13■■□□□ 1.93
ARHGEF39-206ENST00000490970 ABCC10Q5T3U5 1492 aa27.11■■□□□ 1.93
ARHGEF39-206ENST00000490970 CTTNBP2Q8WZ74 1663 aa27.08■■□□□ 1.93
ARHGEF39-206ENST00000490970 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
ARHGEF39-206ENST00000490970 KIAA0556O60303 1618 aa27.06■■□□□ 1.92
ARHGEF39-206ENST00000490970 UACAQ9BZF9 1416 aa27.06■■□□□ 1.92
ARHGEF39-206ENST00000490970 ABCC2Q92887 1545 aa27.04■■□□□ 1.92
ARHGEF39-206ENST00000490970 DIP2BQ9P265 1576 aa27.03■■□□□ 1.92
ARHGEF39-206ENST00000490970 UHRF1BP1LA0JNW5 1464 aa27.01■■□□□ 1.91
ARHGEF39-206ENST00000490970 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
ARHGEF39-206ENST00000490970 GOLGA3Q08378 1498 aa26.95■■□□□ 1.91
ARHGEF39-206ENST00000490970 ASXL2Q76L83 1435 aa26.94■■□□□ 1.9
ARHGEF39-206ENST00000490970 EEA1Q15075 1411 aa26.93■■□□□ 1.9
ARHGEF39-206ENST00000490970 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
ARHGEF39-206ENST00000490970 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.9
ARHGEF39-206ENST00000490970 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
ARHGEF39-206ENST00000490970 P3H3Q8IVL6 736 aa26.88■■□□□ 1.89
ARHGEF39-206ENST00000490970 TSPOAP1O95153 1857 aa26.87■■□□□ 1.89
ARHGEF39-206ENST00000490970 ZCCHC11Q5TAX3 1644 aaKnown RBP26.84■■□□□ 1.89
ARHGEF39-206ENST00000490970 ABCA8O94911 1581 aa26.8■■□□□ 1.88
ARHGEF39-206ENST00000490970 GLI2P10070 1586 aa26.8■■□□□ 1.88
ARHGEF39-206ENST00000490970 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
ARHGEF39-206ENST00000490970 EPRSP07814 1512 aaKnown RBP26.76■■□□□ 1.87
ARHGEF39-206ENST00000490970 KDM6BO15054 1643 aa26.72■■□□□ 1.87
ARHGEF39-206ENST00000490970 SAMD9Q5K651 1589 aa26.72■■□□□ 1.87
ARHGEF39-206ENST00000490970 ARID3CA6NKF2 412 aa26.71■■□□□ 1.87
ARHGEF39-206ENST00000490970 WDR7Q9Y4E6 1490 aa26.7■■□□□ 1.87
ARHGEF39-206ENST00000490970 EHMT2Q96KQ7 1210 aa26.7■■□□□ 1.86
ARHGEF39-206ENST00000490970 PPRC1Q5VV67 1664 aaKnown RBP26.7■■□□□ 1.86
ARHGEF39-206ENST00000490970 KIF21BO75037 1637 aa26.69■■□□□ 1.86
ARHGEF39-206ENST00000490970 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
ARHGEF39-206ENST00000490970 KCNH8Q96L42 1107 aa26.68■■□□□ 1.86
ARHGEF39-206ENST00000490970 MAP3K4Q9Y6R4 1608 aa26.65■■□□□ 1.86
ARHGEF39-206ENST00000490970 ATP10BO94823 1461 aa26.62■■□□□ 1.85
ARHGEF39-206ENST00000490970 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
ARHGEF39-206ENST00000490970 UBTFP17480 764 aaKnown RBP26.59■■□□□ 1.85
ARHGEF39-206ENST00000490970 RAPGEF6Q8TEU7 1601 aa26.57■■□□□ 1.84
ARHGEF39-206ENST00000490970 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
ARHGEF39-206ENST00000490970 COL17A1Q9UMD9 1497 aaPredicted RBP26.55■■□□□ 1.84
ARHGEF39-206ENST00000490970 CD109Q6YHK3 1445 aa26.54■■□□□ 1.84
ARHGEF39-206ENST00000490970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.53■■□□□ 1.84
ARHGEF39-206ENST00000490970 HNRNPUL2Q1KMD3 747 aaKnown RBP26.53■■□□□ 1.84
ARHGEF39-206ENST00000490970 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
ARHGEF39-206ENST00000490970 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
ARHGEF39-206ENST00000490970 CFAP43Q8NDM7 1665 aa26.49■■□□□ 1.83
ARHGEF39-206ENST00000490970 MAGI3Q5TCQ9 1506 aa26.47■■□□□ 1.83
ARHGEF39-206ENST00000490970 KDM4FA0A1W2PPD8 638 aa26.39■■□□□ 1.82
ARHGEF39-206ENST00000490970 ARHGAP35Q9NRY4 1499 aa26.37■■□□□ 1.81
ARHGEF39-206ENST00000490970 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
ARHGEF39-206ENST00000490970 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
ARHGEF39-206ENST00000490970 ATP1B4Q9UN42 357 aaPredicted RBP26.33■■□□□ 1.81
ARHGEF39-206ENST00000490970 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
ARHGEF39-206ENST00000490970 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
ARHGEF39-206ENST00000490970 ARAP3Q8WWN8 1544 aa26.25■■□□□ 1.79
ARHGEF39-206ENST00000490970 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
ARHGEF39-206ENST00000490970 ADGRL1O94910 1474 aa26.21■■□□□ 1.79
ARHGEF39-206ENST00000490970 NEO1Q92859 1461 aa26.2■■□□□ 1.78
ARHGEF39-206ENST00000490970 RAPGEF3O95398 923 aa26.2■■□□□ 1.78
ARHGEF39-206ENST00000490970 HECW1Q76N89 1606 aa26.2■■□□□ 1.78
ARHGEF39-206ENST00000490970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.19■■□□□ 1.78
ARHGEF39-206ENST00000490970 TTC37Q6PGP7 1564 aa26.15■■□□□ 1.78
ARHGEF39-206ENST00000490970 CDK11AQ9UQ88 783 aaPredicted RBP26.12■■□□□ 1.77
ARHGEF39-206ENST00000490970 AKNAQ7Z591 1439 aa26.1■■□□□ 1.77
ARHGEF39-206ENST00000490970 FANCAO15360 1455 aa26.1■■□□□ 1.77
ARHGEF39-206ENST00000490970 LRRIQ1Q96JM4 1722 aa26.08■■□□□ 1.77
ARHGEF39-206ENST00000490970 CLIP1P30622 1438 aa26.07■■□□□ 1.76
ARHGEF39-206ENST00000490970 FRMPD1Q5SYB0 1578 aa26.06■■□□□ 1.76
ARHGEF39-206ENST00000490970 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
ARHGEF39-206ENST00000490970 PCF11O94913 1555 aaKnown RBP26.05■■□□□ 1.76
ARHGEF39-206ENST00000490970 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
ARHGEF39-206ENST00000490970 PLCH2O75038 1416 aa26.04■■□□□ 1.76
ARHGEF39-206ENST00000490970 TROQ12816 1431 aaPredicted RBP26.04■■□□□ 1.76
ARHGEF39-206ENST00000490970 CFAP74Q9C0B2 1584 aa26.02■■□□□ 1.76
ARHGEF39-206ENST00000490970 KIF14Q15058 1648 aa26.02■■□□□ 1.76
ARHGEF39-206ENST00000490970 RICTORQ6R327 1708 aa25.97■■□□□ 1.75
ARHGEF39-206ENST00000490970 EFCAB2Q5VUJ9 269 aa25.97■■□□□ 1.75
ARHGEF39-206ENST00000490970 CCDC18Q5T9S5 1454 aa25.97■■□□□ 1.75
ARHGEF39-206ENST00000490970 SCAPERQ9BY12 1400 aa25.96■■□□□ 1.75
ARHGEF39-206ENST00000490970 MYO5CQ9NQX4 1742 aa25.95■■□□□ 1.74
ARHGEF39-206ENST00000490970 FYCO1Q9BQS8 1478 aa25.94■■□□□ 1.74
ARHGEF39-206ENST00000490970 ARID4BQ4LE39 1312 aaPredicted RBP25.91■■□□□ 1.74
ARHGEF39-206ENST00000490970 ARHGAP5Q13017 1502 aa25.88■■□□□ 1.73
ARHGEF39-206ENST00000490970 ARHGEF40Q8TER5 1519 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms