RNA–Protein interactions for RNA: ENST00000490921.5

PARP1-207, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 3,165 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-207ENST00000490921 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
PARP1-207ENST00000490921 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
PARP1-207ENST00000490921 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
PARP1-207ENST00000490921 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
PARP1-207ENST00000490921 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
PARP1-207ENST00000490921 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
PARP1-207ENST00000490921 RAD54L2Q9Y4B4 1467 aa13.34□□□□□ -0.27
PARP1-207ENST00000490921 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
PARP1-207ENST00000490921 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
PARP1-207ENST00000490921 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
PARP1-207ENST00000490921 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
PARP1-207ENST00000490921 CLIP1P30622 1438 aa13.28□□□□□ -0.28
PARP1-207ENST00000490921 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
PARP1-207ENST00000490921 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
PARP1-207ENST00000490921 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
PARP1-207ENST00000490921 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
PARP1-207ENST00000490921 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
PARP1-207ENST00000490921 ANP32EQ9BTT0 268 aa13.22□□□□□ -0.29
PARP1-207ENST00000490921 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
PARP1-207ENST00000490921 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
PARP1-207ENST00000490921 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
PARP1-207ENST00000490921 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
PARP1-207ENST00000490921 APLP2Q06481 763 aa13.18□□□□□ -0.3
PARP1-207ENST00000490921 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
PARP1-207ENST00000490921 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
PARP1-207ENST00000490921 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
PARP1-207ENST00000490921 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
PARP1-207ENST00000490921 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
PARP1-207ENST00000490921 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
PARP1-207ENST00000490921 SAMD9Q5K651 1589 aa13.13□□□□□ -0.31
PARP1-207ENST00000490921 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.313e-7■■■■□ 19.3
PARP1-207ENST00000490921 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
PARP1-207ENST00000490921 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
PARP1-207ENST00000490921 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
PARP1-207ENST00000490921 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
PARP1-207ENST00000490921 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
PARP1-207ENST00000490921 RRBP1Q9P2E9 1410 aaKnown RBP13.05□□□□□ -0.32
PARP1-207ENST00000490921 GRIN2AQ12879 1464 aa13.05□□□□□ -0.32
PARP1-207ENST00000490921 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
PARP1-207ENST00000490921 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
PARP1-207ENST00000490921 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
PARP1-207ENST00000490921 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
PARP1-207ENST00000490921 NUP160Q12769 1436 aa13.02□□□□□ -0.32
PARP1-207ENST00000490921 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.33
PARP1-207ENST00000490921 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
PARP1-207ENST00000490921 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
PARP1-207ENST00000490921 CASKIN1Q8WXD9 1431 aa13□□□□□ -0.33
PARP1-207ENST00000490921 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
PARP1-207ENST00000490921 BCANQ96GW7 911 aa12.99□□□□□ -0.33
PARP1-207ENST00000490921 FKBP8Q14318 412 aa12.98□□□□□ -0.33
PARP1-207ENST00000490921 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
PARP1-207ENST00000490921 MAPKBP1O60336 1514 aa12.96□□□□□ -0.34
PARP1-207ENST00000490921 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
PARP1-207ENST00000490921 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
PARP1-207ENST00000490921 RBM19Q9Y4C8 960 aaKnown RBP12.94□□□□□ -0.34
PARP1-207ENST00000490921 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
PARP1-207ENST00000490921 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
PARP1-207ENST00000490921 DISP1Q96F81 1524 aa12.91□□□□□ -0.34
PARP1-207ENST00000490921 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
PARP1-207ENST00000490921 CCDC18Q5T9S5 1454 aa12.9□□□□□ -0.34
PARP1-207ENST00000490921 FHOD3Q2V2M9 1422 aa12.9□□□□□ -0.34
PARP1-207ENST00000490921 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
PARP1-207ENST00000490921 LRRC9Q6ZRR7 1453 aa12.89□□□□□ -0.35
PARP1-207ENST00000490921 HECW1Q76N89 1606 aa12.88□□□□□ -0.35
PARP1-207ENST00000490921 DDX10Q13206 875 aaKnown RBP12.88□□□□□ -0.35
PARP1-207ENST00000490921 PPP1R15AO75807 674 aaPredicted RBP12.87□□□□□ -0.35
PARP1-207ENST00000490921 NEFLP07196 543 aa12.87□□□□□ -0.35
PARP1-207ENST00000490921 ITGAEP38570 1179 aa12.85□□□□□ -0.35
PARP1-207ENST00000490921 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
PARP1-207ENST00000490921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
PARP1-207ENST00000490921 CHD1O14646 1710 aa12.84□□□□□ -0.35
PARP1-207ENST00000490921 CCER2I3L3R5 266 aa12.83□□□□□ -0.35
PARP1-207ENST00000490921 CARMIL2Q6F5E8 1435 aa12.83□□□□□ -0.35
PARP1-207ENST00000490921 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
PARP1-207ENST00000490921 MSH5O43196 834 aa12.82□□□□□ -0.36
PARP1-207ENST00000490921 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
PARP1-207ENST00000490921 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
PARP1-207ENST00000490921 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
PARP1-207ENST00000490921 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
PARP1-207ENST00000490921 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
PARP1-207ENST00000490921 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
PARP1-207ENST00000490921 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
PARP1-207ENST00000490921 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
PARP1-207ENST00000490921 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
PARP1-207ENST00000490921 ABCA8O94911 1581 aa12.78□□□□□ -0.36
PARP1-207ENST00000490921 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
PARP1-207ENST00000490921 ANP32CO43423 234 aa12.77□□□□□ -0.37
PARP1-207ENST00000490921 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
PARP1-207ENST00000490921 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
PARP1-207ENST00000490921 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
PARP1-207ENST00000490921 NUP153P49790 1475 aaKnown RBP12.74□□□□□ -0.37
PARP1-207ENST00000490921 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
PARP1-207ENST00000490921 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
PARP1-207ENST00000490921 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
PARP1-207ENST00000490921 P3H3Q8IVL6 736 aa12.71□□□□□ -0.38
PARP1-207ENST00000490921 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
PARP1-207ENST00000490921 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
PARP1-207ENST00000490921 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
PARP1-207ENST00000490921 MIA2Q96PC5 1412 aa12.69□□□□□ -0.38
PARP1-207ENST00000490921 UHRF1BP1LA0JNW5 1464 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms