RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
COL27A1-206ENST00000490831 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
COL27A1-206ENST00000490831 PRG4Q92954 1404 aaPredicted RBP25.96■■□□□ 1.75
COL27A1-206ENST00000490831 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
COL27A1-206ENST00000490831 IQGAP2Q13576 1575 aa25.77■■□□□ 1.72
COL27A1-206ENST00000490831 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
COL27A1-206ENST00000490831 TRHP20396 242 aaPredicted RBP25.71■■□□□ 1.71
COL27A1-206ENST00000490831 CARMIL2Q6F5E8 1435 aa25.68■■□□□ 1.7
COL27A1-206ENST00000490831 UGGT2Q9NYU1 1516 aa25.67■■□□□ 1.7
COL27A1-206ENST00000490831 EEA1Q15075 1411 aa25.65■■□□□ 1.7
COL27A1-206ENST00000490831 DISP1Q96F81 1524 aa25.63■■□□□ 1.69
COL27A1-206ENST00000490831 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
COL27A1-206ENST00000490831 CSRNP3Q8WYN3 585 aa25.62■■□□□ 1.69
COL27A1-206ENST00000490831 PTPRGP23470 1445 aa25.62■■□□□ 1.69
COL27A1-206ENST00000490831 CTTNBP2Q8WZ74 1663 aa25.61■■□□□ 1.69
COL27A1-206ENST00000490831 ADCY10Q96PN6 1610 aa25.6■■□□□ 1.69
COL27A1-206ENST00000490831 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
COL27A1-206ENST00000490831 KIAA0556O60303 1618 aa25.53■■□□□ 1.68
COL27A1-206ENST00000490831 MAPKBP1O60336 1514 aa25.52■■□□□ 1.68
COL27A1-206ENST00000490831 NPM1P06748 294 aaKnown RBP eCLIP25.5■■□□□ 1.67
COL27A1-206ENST00000490831 UHRF1BP1LA0JNW5 1464 aa25.48■■□□□ 1.67
COL27A1-206ENST00000490831 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
COL27A1-206ENST00000490831 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
COL27A1-206ENST00000490831 ABCC2Q92887 1545 aa25.44■■□□□ 1.66
COL27A1-206ENST00000490831 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
COL27A1-206ENST00000490831 ABCC10Q5T3U5 1492 aa25.42■■□□□ 1.66
COL27A1-206ENST00000490831 KIF13AQ9H1H9 1805 aa25.42■■□□□ 1.66
COL27A1-206ENST00000490831 KIF21BO75037 1637 aa25.39■■□□□ 1.66
COL27A1-206ENST00000490831 FAM9AQ8IZU1 332 aaPredicted RBP25.38■■□□□ 1.65
COL27A1-206ENST00000490831 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
COL27A1-206ENST00000490831 KDM5BQ9UGL1 1544 aa25.35■■□□□ 1.65
COL27A1-206ENST00000490831 FAM69CQ0P6D2 419 aa25.31■■□□□ 1.64
COL27A1-206ENST00000490831 SAMD9Q5K651 1589 aa25.31■■□□□ 1.64
COL27A1-206ENST00000490831 ABCA8O94911 1581 aa25.3■■□□□ 1.64
COL27A1-206ENST00000490831 PLB1Q6P1J6 1458 aa25.29■■□□□ 1.64
COL27A1-206ENST00000490831 ASXL2Q76L83 1435 aa25.29■■□□□ 1.64
COL27A1-206ENST00000490831 ZCCHC11Q5TAX3 1644 aaKnown RBP25.24■■□□□ 1.63
COL27A1-206ENST00000490831 GLI2P10070 1586 aa25.2■■□□□ 1.62
COL27A1-206ENST00000490831 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
COL27A1-206ENST00000490831 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
COL27A1-206ENST00000490831 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
COL27A1-206ENST00000490831 WDR7Q9Y4E6 1490 aa25.13■■□□□ 1.61
COL27A1-206ENST00000490831 FHOD3Q2V2M9 1422 aa25.11■■□□□ 1.61
COL27A1-206ENST00000490831 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
COL27A1-206ENST00000490831 RAPGEF6Q8TEU7 1601 aa25.08■■□□□ 1.61
COL27A1-206ENST00000490831 ATP10BO94823 1461 aa25.08■■□□□ 1.6
COL27A1-206ENST00000490831 RANGAP1P46060 587 aaPredicted RBP25.07■■□□□ 1.6
COL27A1-206ENST00000490831 TSPOAP1O95153 1857 aa25.06■■□□□ 1.6
COL27A1-206ENST00000490831 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
COL27A1-206ENST00000490831 PPRC1Q5VV67 1664 aaKnown RBP25.05■■□□□ 1.6
COL27A1-206ENST00000490831 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
COL27A1-206ENST00000490831 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
COL27A1-206ENST00000490831 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
COL27A1-206ENST00000490831 KDM6BO15054 1643 aa24.97■■□□□ 1.59
COL27A1-206ENST00000490831 ARID3CA6NKF2 412 aa24.95■■□□□ 1.58
COL27A1-206ENST00000490831 TEX14Q8IWB6 1497 aa24.95■■□□□ 1.58
COL27A1-206ENST00000490831 CFAP43Q8NDM7 1665 aa24.94■■□□□ 1.58
COL27A1-206ENST00000490831 KCNH8Q96L42 1107 aa24.92■■□□□ 1.58
COL27A1-206ENST00000490831 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
COL27A1-206ENST00000490831 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
COL27A1-206ENST00000490831 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
COL27A1-206ENST00000490831 ABCA9Q8IUA7 1624 aa24.85■■□□□ 1.57
COL27A1-206ENST00000490831 COL17A1Q9UMD9 1497 aaPredicted RBP24.84■■□□□ 1.57
COL27A1-206ENST00000490831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
COL27A1-206ENST00000490831 HNRNPUL2Q1KMD3 747 aaKnown RBP24.84■■□□□ 1.57
COL27A1-206ENST00000490831 PLEKHD1A6NEE1 506 aa24.8■■□□□ 1.56
COL27A1-206ENST00000490831 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
COL27A1-206ENST00000490831 CDK13Q14004 1512 aaKnown RBP24.77■■□□□ 1.56
COL27A1-206ENST00000490831 CLIP1P30622 1438 aa24.73■■□□□ 1.55
COL27A1-206ENST00000490831 PHLDB1Q86UU1 1377 aa24.72■■□□□ 1.55
COL27A1-206ENST00000490831 ARAP3Q8WWN8 1544 aa24.71■■□□□ 1.55
COL27A1-206ENST00000490831 CASKIN1Q8WXD9 1431 aa24.7■■□□□ 1.55
COL27A1-206ENST00000490831 NEO1Q92859 1461 aa24.69■■□□□ 1.54
COL27A1-206ENST00000490831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.68■■□□□ 1.54
COL27A1-206ENST00000490831 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
COL27A1-206ENST00000490831 PCF11O94913 1555 aaKnown RBP24.66■■□□□ 1.54
COL27A1-206ENST00000490831 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
COL27A1-206ENST00000490831 CDK11AQ9UQ88 783 aaPredicted RBP24.65■■□□□ 1.54
COL27A1-206ENST00000490831 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
COL27A1-206ENST00000490831 FYCO1Q9BQS8 1478 aa24.63■■□□□ 1.53
COL27A1-206ENST00000490831 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
COL27A1-206ENST00000490831 TROQ12816 1431 aaPredicted RBP24.61■■□□□ 1.53
COL27A1-206ENST00000490831 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
COL27A1-206ENST00000490831 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
COL27A1-206ENST00000490831 PLCH2O75038 1416 aa24.56■■□□□ 1.52
COL27A1-206ENST00000490831 FANCAO15360 1455 aa24.56■■□□□ 1.52
COL27A1-206ENST00000490831 CFAP74Q9C0B2 1584 aa24.55■■□□□ 1.52
COL27A1-206ENST00000490831 KIF14Q15058 1648 aa24.54■■□□□ 1.52
COL27A1-206ENST00000490831 AKNAQ7Z591 1439 aa24.53■■□□□ 1.52
COL27A1-206ENST00000490831 KDM4FA0A1W2PPD8 638 aa24.53■■□□□ 1.52
COL27A1-206ENST00000490831 FRMPD1Q5SYB0 1578 aa24.51■■□□□ 1.51
COL27A1-206ENST00000490831 RAPGEF3O95398 923 aa24.5■■□□□ 1.51
COL27A1-206ENST00000490831 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
COL27A1-206ENST00000490831 DENND4BO75064 1496 aaPredicted RBP24.48■■□□□ 1.51
COL27A1-206ENST00000490831 MYO5CQ9NQX4 1742 aa24.48■■□□□ 1.51
COL27A1-206ENST00000490831 RICTORQ6R327 1708 aa24.45■■□□□ 1.5
COL27A1-206ENST00000490831 ADGRL1O94910 1474 aa24.45■■□□□ 1.5
COL27A1-206ENST00000490831 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
COL27A1-206ENST00000490831 ZMYM4Q5VZL5 1548 aa24.4■■□□□ 1.5
COL27A1-206ENST00000490831 SCAPERQ9BY12 1400 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms