RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 RUSC2Q8N2Y8 1516 aa34.15■■■■□ 3.06
SREBF1-216ENST00000490796 CUL7Q14999 1698 aa34.12■■■■□ 3.05
SREBF1-216ENST00000490796 KIAA0586Q9BVV6 1533 aa34.06■■■■□ 3.04
SREBF1-216ENST00000490796 CARMIL1Q5VZK9 1371 aa34.02■■■■□ 3.04
SREBF1-216ENST00000490796 NPM1P06748 294 aaKnown RBP eCLIP34.02■■■■□ 3.04
SREBF1-216ENST00000490796 TTBK1Q5TCY1 1321 aaPredicted RBP33.82■■■■□ 3.01
SREBF1-216ENST00000490796 CARMIL2Q6F5E8 1435 aa33.81■■■■□ 3
SREBF1-216ENST00000490796 FAM69CQ0P6D2 419 aa33.79■■■■□ 3
SREBF1-216ENST00000490796 PTPRGP23470 1445 aa33.79■■■■□ 3
SREBF1-216ENST00000490796 ADCY10Q96PN6 1610 aa33.77■■■■□ 3
SREBF1-216ENST00000490796 KIF13AQ9H1H9 1805 aa33.76■■■□□ 2.99
SREBF1-216ENST00000490796 MAPKBP1O60336 1514 aa33.74■■■□□ 2.99
SREBF1-216ENST00000490796 AEBP2Q6ZN18 517 aaPredicted RBP33.74■■■□□ 2.99
SREBF1-216ENST00000490796 IQGAP2Q13576 1575 aa33.73■■■□□ 2.99
SREBF1-216ENST00000490796 ABCC10Q5T3U5 1492 aa33.73■■■□□ 2.99
SREBF1-216ENST00000490796 TNIKQ9UKE5 1360 aa33.72■■■□□ 2.99
SREBF1-216ENST00000490796 RAPGEF2Q9Y4G8 1499 aa33.7■■■□□ 2.99
SREBF1-216ENST00000490796 DIP2BQ9P265 1576 aa33.6■■■□□ 2.97
SREBF1-216ENST00000490796 ABCC2Q92887 1545 aa33.53■■■□□ 2.96
SREBF1-216ENST00000490796 DISP1Q96F81 1524 aa33.53■■■□□ 2.96
SREBF1-216ENST00000490796 UGGT2Q9NYU1 1516 aa33.5■■■□□ 2.95
SREBF1-216ENST00000490796 UACAQ9BZF9 1416 aa33.5■■■□□ 2.95
SREBF1-216ENST00000490796 UHRF1BP1LA0JNW5 1464 aa33.46■■■□□ 2.95
SREBF1-216ENST00000490796 PLB1Q6P1J6 1458 aa33.43■■■□□ 2.94
SREBF1-216ENST00000490796 ASXL2Q76L83 1435 aa33.42■■■□□ 2.94
SREBF1-216ENST00000490796 TSPOAP1O95153 1857 aa33.42■■■□□ 2.94
SREBF1-216ENST00000490796 KIAA0556O60303 1618 aa33.4■■■□□ 2.94
SREBF1-216ENST00000490796 CTTNBP2Q8WZ74 1663 aa33.36■■■□□ 2.93
SREBF1-216ENST00000490796 KDM6BO15054 1643 aa33.35■■■□□ 2.93
SREBF1-216ENST00000490796 GOLGA3Q08378 1498 aa33.33■■■□□ 2.93
SREBF1-216ENST00000490796 PRXQ9BXM0 1461 aa33.32■■■□□ 2.92
SREBF1-216ENST00000490796 KDM5BQ9UGL1 1544 aa33.3■■■□□ 2.92
SREBF1-216ENST00000490796 GLI2P10070 1586 aa33.26■■■□□ 2.92
SREBF1-216ENST00000490796 FAM9AQ8IZU1 332 aaPredicted RBP33.26■■■□□ 2.91
SREBF1-216ENST00000490796 ZCCHC11Q5TAX3 1644 aaKnown RBP33.22■■■□□ 2.91
SREBF1-216ENST00000490796 CSRNP3Q8WYN3 585 aa33.2■■■□□ 2.91
SREBF1-216ENST00000490796 EPRSP07814 1512 aaKnown RBP33.19■■■□□ 2.9
SREBF1-216ENST00000490796 WDR7Q9Y4E6 1490 aa33.12■■■□□ 2.89
SREBF1-216ENST00000490796 P3H3Q8IVL6 736 aa33.09■■■□□ 2.89
SREBF1-216ENST00000490796 TEX14Q8IWB6 1497 aa33.09■■■□□ 2.89
SREBF1-216ENST00000490796 PPRC1Q5VV67 1664 aaKnown RBP33.09■■■□□ 2.89
SREBF1-216ENST00000490796 ABCA8O94911 1581 aa33.08■■■□□ 2.89
SREBF1-216ENST00000490796 MAP3K4Q9Y6R4 1608 aa33.06■■■□□ 2.88
SREBF1-216ENST00000490796 EEA1Q15075 1411 aa33.05■■■□□ 2.88
SREBF1-216ENST00000490796 KCNH8Q96L42 1107 aa33.05■■■□□ 2.88
SREBF1-216ENST00000490796 ARID3CA6NKF2 412 aa32.97■■■□□ 2.87
SREBF1-216ENST00000490796 KDM4FA0A1W2PPD8 638 aa32.96■■■□□ 2.87
SREBF1-216ENST00000490796 CD109Q6YHK3 1445 aa32.94■■■□□ 2.86
SREBF1-216ENST00000490796 RANGAP1P46060 587 aaPredicted RBP32.94■■■□□ 2.86
SREBF1-216ENST00000490796 COL17A1Q9UMD9 1497 aaPredicted RBP32.91■■■□□ 2.86
SREBF1-216ENST00000490796 CFAP43Q8NDM7 1665 aa32.87■■■□□ 2.85
SREBF1-216ENST00000490796 SAMD9Q5K651 1589 aa32.87■■■□□ 2.85
SREBF1-216ENST00000490796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.85■■■□□ 2.85
SREBF1-216ENST00000490796 HNRNPUL2Q1KMD3 747 aaKnown RBP32.85■■■□□ 2.85
SREBF1-216ENST00000490796 MAGI3Q5TCQ9 1506 aa32.85■■■□□ 2.85
SREBF1-216ENST00000490796 ATP10BO94823 1461 aa32.84■■■□□ 2.85
SREBF1-216ENST00000490796 RAPGEF6Q8TEU7 1601 aa32.77■■■□□ 2.84
SREBF1-216ENST00000490796 FHOD3Q2V2M9 1422 aa32.74■■■□□ 2.83
SREBF1-216ENST00000490796 ADGRL1O94910 1474 aa32.74■■■□□ 2.83
SREBF1-216ENST00000490796 KIF21BO75037 1637 aa32.7■■■□□ 2.83
SREBF1-216ENST00000490796 EHMT2Q96KQ7 1210 aa32.66■■■□□ 2.82
SREBF1-216ENST00000490796 UBTFP17480 764 aaKnown RBP32.65■■■□□ 2.82
SREBF1-216ENST00000490796 NUP153P49790 1475 aaKnown RBP32.64■■■□□ 2.82
SREBF1-216ENST00000490796 EFCAB5A4FU69 1503 aa32.63■■■□□ 2.81
SREBF1-216ENST00000490796 CHIC1Q5VXU3 224 aa32.63■■■□□ 2.81
SREBF1-216ENST00000490796 ABCA9Q8IUA7 1624 aa32.62■■■□□ 2.81
SREBF1-216ENST00000490796 PLEKHD1A6NEE1 506 aa32.61■■■□□ 2.81
SREBF1-216ENST00000490796 PHLDB1Q86UU1 1377 aa32.6■■■□□ 2.81
SREBF1-216ENST00000490796 ARAP3Q8WWN8 1544 aa32.58■■■□□ 2.81
SREBF1-216ENST00000490796 NEO1Q92859 1461 aa32.5■■■□□ 2.79
SREBF1-216ENST00000490796 RAPGEF3O95398 923 aa32.47■■■□□ 2.79
SREBF1-216ENST00000490796 ATP1B4Q9UN42 357 aaPredicted RBP32.47■■■□□ 2.79
SREBF1-216ENST00000490796 FMN1Q68DA7 1419 aa32.4■■■□□ 2.78
SREBF1-216ENST00000490796 CDK13Q14004 1512 aaKnown RBP32.36■■■□□ 2.77
SREBF1-216ENST00000490796 ARHGAP35Q9NRY4 1499 aa32.33■■■□□ 2.77
SREBF1-216ENST00000490796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.32■■■□□ 2.76
SREBF1-216ENST00000490796 FANCAO15360 1455 aa32.32■■■□□ 2.76
SREBF1-216ENST00000490796 CDK11AQ9UQ88 783 aaPredicted RBP32.32■■■□□ 2.76
SREBF1-216ENST00000490796 AKNAQ7Z591 1439 aa32.32■■■□□ 2.76
SREBF1-216ENST00000490796 ARID4BQ4LE39 1312 aaPredicted RBP32.31■■■□□ 2.76
SREBF1-216ENST00000490796 DENND4BO75064 1496 aaPredicted RBP32.3■■■□□ 2.76
SREBF1-216ENST00000490796 CFAP74Q9C0B2 1584 aa32.29■■■□□ 2.76
SREBF1-216ENST00000490796 HECW1Q76N89 1606 aa32.29■■■□□ 2.76
SREBF1-216ENST00000490796 TTC37Q6PGP7 1564 aa32.26■■■□□ 2.75
SREBF1-216ENST00000490796 FRMPD1Q5SYB0 1578 aa32.24■■■□□ 2.75
SREBF1-216ENST00000490796 HECW2Q9P2P5 1572 aa32.23■■■□□ 2.75
SREBF1-216ENST00000490796 PLCH2O75038 1416 aa32.17■■■□□ 2.74
SREBF1-216ENST00000490796 RICTORQ6R327 1708 aa32.15■■■□□ 2.74
SREBF1-216ENST00000490796 EFCAB2Q5VUJ9 269 aa32.14■■■□□ 2.74
SREBF1-216ENST00000490796 ARHGEF40Q8TER5 1519 aa32.14■■■□□ 2.74
SREBF1-216ENST00000490796 CLIP1P30622 1438 aa32.13■■■□□ 2.73
SREBF1-216ENST00000490796 ADAMTSL3P82987 1691 aa32.11■■■□□ 2.73
SREBF1-216ENST00000490796 SCAPERQ9BY12 1400 aa32.11■■■□□ 2.73
SREBF1-216ENST00000490796 PTPRMP28827 1452 aa32.1■■■□□ 2.73
SREBF1-216ENST00000490796 TROQ12816 1431 aaPredicted RBP32.1■■■□□ 2.73
SREBF1-216ENST00000490796 KIF14Q15058 1648 aa32.08■■■□□ 2.73
SREBF1-216ENST00000490796 BCORL1Q5H9F3 1711 aa32.08■■■□□ 2.73
SREBF1-216ENST00000490796 ZMYM4Q5VZL5 1548 aa32.06■■■□□ 2.72
SREBF1-216ENST00000490796 ZFYVE16Q7Z3T8 1539 aa32.06■■■□□ 2.72
SREBF1-216ENST00000490796 MAGI2Q86UL8 1455 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms