RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
PUM1-210ENST00000490546 NUP160Q12769 1436 aa16.61■□□□□ 0.25
PUM1-210ENST00000490546 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
PUM1-210ENST00000490546 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
PUM1-210ENST00000490546 CEP170Q5SW79 1584 aa16.59■□□□□ 0.25
PUM1-210ENST00000490546 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
PUM1-210ENST00000490546 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
PUM1-210ENST00000490546 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
PUM1-210ENST00000490546 CLIP1P30622 1438 aa16.49■□□□□ 0.23
PUM1-210ENST00000490546 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
PUM1-210ENST00000490546 CARMIL2Q6F5E8 1435 aa16.47■□□□□ 0.23
PUM1-210ENST00000490546 UGGT2Q9NYU1 1516 aa16.46■□□□□ 0.23
PUM1-210ENST00000490546 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
PUM1-210ENST00000490546 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
PUM1-210ENST00000490546 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
PUM1-210ENST00000490546 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
PUM1-210ENST00000490546 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
PUM1-210ENST00000490546 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
PUM1-210ENST00000490546 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
PUM1-210ENST00000490546 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
PUM1-210ENST00000490546 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
PUM1-210ENST00000490546 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
PUM1-210ENST00000490546 PTPRGP23470 1445 aa16.33■□□□□ 0.2
PUM1-210ENST00000490546 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
PUM1-210ENST00000490546 ARAP1Q96P48 1450 aa16.32■□□□□ 0.2
PUM1-210ENST00000490546 ATP1B4Q9UN42 357 aaPredicted RBP16.3■□□□□ 0.2
PUM1-210ENST00000490546 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
PUM1-210ENST00000490546 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
PUM1-210ENST00000490546 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
PUM1-210ENST00000490546 APLP2Q06481 763 aa16.26■□□□□ 0.19
PUM1-210ENST00000490546 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
PUM1-210ENST00000490546 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
PUM1-210ENST00000490546 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
PUM1-210ENST00000490546 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
PUM1-210ENST00000490546 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
PUM1-210ENST00000490546 UACAQ9BZF9 1416 aa16.2■□□□□ 0.18
PUM1-210ENST00000490546 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
PUM1-210ENST00000490546 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
PUM1-210ENST00000490546 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
PUM1-210ENST00000490546 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
PUM1-210ENST00000490546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
PUM1-210ENST00000490546 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
PUM1-210ENST00000490546 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
PUM1-210ENST00000490546 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
PUM1-210ENST00000490546 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
PUM1-210ENST00000490546 ABCA8O94911 1581 aa16.16■□□□□ 0.18
PUM1-210ENST00000490546 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
PUM1-210ENST00000490546 ABCC2Q92887 1545 aa16.14■□□□□ 0.17
PUM1-210ENST00000490546 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
PUM1-210ENST00000490546 UHRF1BP1LA0JNW5 1464 aa16.13■□□□□ 0.17
PUM1-210ENST00000490546 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
PUM1-210ENST00000490546 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
PUM1-210ENST00000490546 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
PUM1-210ENST00000490546 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.16
PUM1-210ENST00000490546 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
PUM1-210ENST00000490546 MAP3K1Q13233 1512 aa16.06■□□□□ 0.16
PUM1-210ENST00000490546 ATP10BO94823 1461 aa16.06■□□□□ 0.16
PUM1-210ENST00000490546 CDK13Q14004 1512 aaKnown RBP16.05■□□□□ 0.16
PUM1-210ENST00000490546 TIAM1Q13009 1591 aa16.04■□□□□ 0.16
PUM1-210ENST00000490546 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
PUM1-210ENST00000490546 MTUS2Q5JR59 1369 aa16.03■□□□□ 0.16
PUM1-210ENST00000490546 LRRIQ1Q96JM4 1722 aa16.03■□□□□ 0.16
PUM1-210ENST00000490546 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.16
PUM1-210ENST00000490546 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
PUM1-210ENST00000490546 PPARGC1BQ86YN6 1023 aaKnown RBP16.02■□□□□ 0.16
PUM1-210ENST00000490546 KANK4Q5T7N3 995 aaPredicted RBP15.99■□□□□ 0.15
PUM1-210ENST00000490546 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
PUM1-210ENST00000490546 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
PUM1-210ENST00000490546 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
PUM1-210ENST00000490546 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
PUM1-210ENST00000490546 ASXL2Q76L83 1435 aa15.94■□□□□ 0.14
PUM1-210ENST00000490546 WDR7Q9Y4E6 1490 aa15.92■□□□□ 0.14
PUM1-210ENST00000490546 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
PUM1-210ENST00000490546 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
PUM1-210ENST00000490546 MAPKBP1O60336 1514 aa15.89■□□□□ 0.13
PUM1-210ENST00000490546 KIF14Q15058 1648 aa15.89■□□□□ 0.13
PUM1-210ENST00000490546 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
PUM1-210ENST00000490546 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
PUM1-210ENST00000490546 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
PUM1-210ENST00000490546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.12
PUM1-210ENST00000490546 CFDP1Q9UEE9 299 aaPredicted RBP15.8■□□□□ 0.12
PUM1-210ENST00000490546 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
PUM1-210ENST00000490546 MYOM3Q5VTT5 1437 aa15.79■□□□□ 0.12
PUM1-210ENST00000490546 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
PUM1-210ENST00000490546 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
PUM1-210ENST00000490546 CD109Q6YHK3 1445 aa15.77■□□□□ 0.12
PUM1-210ENST00000490546 ITSN2Q9NZM3 1697 aa15.77■□□□□ 0.12
PUM1-210ENST00000490546 ABCA9Q8IUA7 1624 aa15.77■□□□□ 0.12
PUM1-210ENST00000490546 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.12
PUM1-210ENST00000490546 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
PUM1-210ENST00000490546 TTC37Q6PGP7 1564 aa15.77■□□□□ 0.11
PUM1-210ENST00000490546 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.11
PUM1-210ENST00000490546 GLI2P10070 1586 aa15.76■□□□□ 0.11
PUM1-210ENST00000490546 GPATCH8Q9UKJ3 1502 aaKnown RBP15.76■□□□□ 0.11
PUM1-210ENST00000490546 DIP2BQ9P265 1576 aa15.75■□□□□ 0.11
PUM1-210ENST00000490546 CDC42BPAQ5VT25 1732 aa15.75■□□□□ 0.11
PUM1-210ENST00000490546 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
PUM1-210ENST00000490546 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
PUM1-210ENST00000490546 PLCH2O75038 1416 aa15.75■□□□□ 0.11
PUM1-210ENST00000490546 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms