RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
PUM1-210ENST00000490546 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
PUM1-210ENST00000490546 ABCC9O60706 1549 aa20.38■□□□□ 0.85
PUM1-210ENST00000490546 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
PUM1-210ENST00000490546 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
PUM1-210ENST00000490546 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
PUM1-210ENST00000490546 NACADO15069 1562 aa19.87■□□□□ 0.77
PUM1-210ENST00000490546 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
PUM1-210ENST00000490546 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
PUM1-210ENST00000490546 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
PUM1-210ENST00000490546 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
PUM1-210ENST00000490546 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
PUM1-210ENST00000490546 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
PUM1-210ENST00000490546 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
PUM1-210ENST00000490546 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
PUM1-210ENST00000490546 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
PUM1-210ENST00000490546 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
PUM1-210ENST00000490546 SMARCA4P51532 1647 aa18.58■□□□□ 0.56
PUM1-210ENST00000490546 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
PUM1-210ENST00000490546 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
PUM1-210ENST00000490546 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
PUM1-210ENST00000490546 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
PUM1-210ENST00000490546 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
PUM1-210ENST00000490546 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
PUM1-210ENST00000490546 WIZO95785 1651 aa18.38■□□□□ 0.53
PUM1-210ENST00000490546 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
PUM1-210ENST00000490546 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
PUM1-210ENST00000490546 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
PUM1-210ENST00000490546 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
PUM1-210ENST00000490546 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
PUM1-210ENST00000490546 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
PUM1-210ENST00000490546 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
PUM1-210ENST00000490546 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
PUM1-210ENST00000490546 CFTRP13569 1480 aa17.78■□□□□ 0.44
PUM1-210ENST00000490546 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
PUM1-210ENST00000490546 NESP48681 1621 aa17.73■□□□□ 0.43
PUM1-210ENST00000490546 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
PUM1-210ENST00000490546 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
PUM1-210ENST00000490546 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
PUM1-210ENST00000490546 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
PUM1-210ENST00000490546 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
PUM1-210ENST00000490546 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
PUM1-210ENST00000490546 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.391e-10■□□□□ 9.9
PUM1-210ENST00000490546 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
PUM1-210ENST00000490546 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
PUM1-210ENST00000490546 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
PUM1-210ENST00000490546 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
PUM1-210ENST00000490546 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
PUM1-210ENST00000490546 CUX1P39880 1505 aa17.38■□□□□ 0.37
PUM1-210ENST00000490546 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
PUM1-210ENST00000490546 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
PUM1-210ENST00000490546 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
PUM1-210ENST00000490546 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
PUM1-210ENST00000490546 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
PUM1-210ENST00000490546 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
PUM1-210ENST00000490546 WDR62O43379 1518 aa17.32■□□□□ 0.36
PUM1-210ENST00000490546 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
PUM1-210ENST00000490546 SOGA1O94964 1423 aa17.24■□□□□ 0.35
PUM1-210ENST00000490546 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
PUM1-210ENST00000490546 CUX2O14529 1486 aa17.19■□□□□ 0.34
PUM1-210ENST00000490546 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
PUM1-210ENST00000490546 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
PUM1-210ENST00000490546 ABCA10Q8WWZ4 1543 aa17.12■□□□□ 0.33
PUM1-210ENST00000490546 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
PUM1-210ENST00000490546 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
PUM1-210ENST00000490546 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.32
PUM1-210ENST00000490546 FAM9AQ8IZU1 332 aaPredicted RBP17.08■□□□□ 0.32
PUM1-210ENST00000490546 EEA1Q15075 1411 aa17.06■□□□□ 0.32
PUM1-210ENST00000490546 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
PUM1-210ENST00000490546 ZNF608Q9ULD9 1512 aaPredicted RBP17.03■□□□□ 0.32
PUM1-210ENST00000490546 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.323e-7■■■■■ 40.2
PUM1-210ENST00000490546 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
PUM1-210ENST00000490546 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
PUM1-210ENST00000490546 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
PUM1-210ENST00000490546 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
PUM1-210ENST00000490546 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
PUM1-210ENST00000490546 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
PUM1-210ENST00000490546 IGF1RP08069 1367 aa16.95■□□□□ 0.3
PUM1-210ENST00000490546 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
PUM1-210ENST00000490546 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
PUM1-210ENST00000490546 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
PUM1-210ENST00000490546 CUL7Q14999 1698 aa16.88■□□□□ 0.29
PUM1-210ENST00000490546 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
PUM1-210ENST00000490546 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
PUM1-210ENST00000490546 FBLN2P98095 1184 aa16.85■□□□□ 0.29
PUM1-210ENST00000490546 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
PUM1-210ENST00000490546 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
PUM1-210ENST00000490546 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
PUM1-210ENST00000490546 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
PUM1-210ENST00000490546 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
PUM1-210ENST00000490546 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
PUM1-210ENST00000490546 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PUM1-210ENST00000490546 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
PUM1-210ENST00000490546 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
PUM1-210ENST00000490546 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
PUM1-210ENST00000490546 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
PUM1-210ENST00000490546 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
PUM1-210ENST00000490546 CHD1O14646 1710 aa16.7■□□□□ 0.26
PUM1-210ENST00000490546 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
PUM1-210ENST00000490546 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms