RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 NPM1P06748 294 aaKnown RBP eCLIP28.42■■■□□ 2.14
LRCH4-208ENST00000490359 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
LRCH4-208ENST00000490359 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
LRCH4-208ENST00000490359 KIAA0586Q9BVV6 1533 aa28.35■■■□□ 2.13
LRCH4-208ENST00000490359 PRG4Q92954 1404 aaPredicted RBP28.35■■■□□ 2.13
LRCH4-208ENST00000490359 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
LRCH4-208ENST00000490359 AEBP2Q6ZN18 517 aaPredicted RBP28.16■■■□□ 2.1
LRCH4-208ENST00000490359 IQGAP2Q13576 1575 aa28.16■■■□□ 2.1
LRCH4-208ENST00000490359 PRXQ9BXM0 1461 aa28.15■■■□□ 2.1
LRCH4-208ENST00000490359 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
LRCH4-208ENST00000490359 CSRNP3Q8WYN3 585 aa28.11■■■□□ 2.09
LRCH4-208ENST00000490359 EEA1Q15075 1411 aa28.09■■■□□ 2.09
LRCH4-208ENST00000490359 CARMIL2Q6F5E8 1435 aa28.07■■■□□ 2.08
LRCH4-208ENST00000490359 TTBK1Q5TCY1 1321 aaPredicted RBP28.05■■■□□ 2.08
LRCH4-208ENST00000490359 FAM69CQ0P6D2 419 aa28.03■■■□□ 2.08
LRCH4-208ENST00000490359 FAM9AQ8IZU1 332 aaPredicted RBP28.03■■■□□ 2.08
LRCH4-208ENST00000490359 UGGT2Q9NYU1 1516 aa28■■■□□ 2.07
LRCH4-208ENST00000490359 PTPRGP23470 1445 aa28■■■□□ 2.07
LRCH4-208ENST00000490359 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
LRCH4-208ENST00000490359 CTTNBP2Q8WZ74 1663 aa27.98■■■□□ 2.07
LRCH4-208ENST00000490359 DISP1Q96F81 1524 aa27.97■■■□□ 2.07
LRCH4-208ENST00000490359 ADCY10Q96PN6 1610 aa27.91■■■□□ 2.06
LRCH4-208ENST00000490359 KIAA0556O60303 1618 aa27.89■■■□□ 2.06
LRCH4-208ENST00000490359 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
LRCH4-208ENST00000490359 ABCC10Q5T3U5 1492 aa27.83■■■□□ 2.05
LRCH4-208ENST00000490359 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
LRCH4-208ENST00000490359 MAPKBP1O60336 1514 aa27.8■■■□□ 2.04
LRCH4-208ENST00000490359 KIF21BO75037 1637 aa27.78■■■□□ 2.04
LRCH4-208ENST00000490359 UHRF1BP1LA0JNW5 1464 aa27.76■■■□□ 2.03
LRCH4-208ENST00000490359 ABCC2Q92887 1545 aa27.75■■■□□ 2.03
LRCH4-208ENST00000490359 P3H3Q8IVL6 736 aa27.7■■■□□ 2.02
LRCH4-208ENST00000490359 EHMT2Q96KQ7 1210 aa27.7■■■□□ 2.02
LRCH4-208ENST00000490359 PLB1Q6P1J6 1458 aa27.69■■■□□ 2.02
LRCH4-208ENST00000490359 RANGAP1P46060 587 aaPredicted RBP27.67■■■□□ 2.02
LRCH4-208ENST00000490359 KIF13AQ9H1H9 1805 aa27.64■■■□□ 2.01
LRCH4-208ENST00000490359 UBTFP17480 764 aaKnown RBP27.63■■■□□ 2.01
LRCH4-208ENST00000490359 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
LRCH4-208ENST00000490359 KDM5BQ9UGL1 1544 aa27.62■■■□□ 2.01
LRCH4-208ENST00000490359 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
LRCH4-208ENST00000490359 ASXL2Q76L83 1435 aa27.6■■■□□ 2.01
LRCH4-208ENST00000490359 ABCA8O94911 1581 aa27.6■■■□□ 2.01
LRCH4-208ENST00000490359 ZCCHC11Q5TAX3 1644 aaKnown RBP27.56■■■□□ 2
LRCH4-208ENST00000490359 FHOD3Q2V2M9 1422 aa27.51■■□□□ 1.99
LRCH4-208ENST00000490359 EFCAB5A4FU69 1503 aa27.5■■□□□ 1.99
LRCH4-208ENST00000490359 KDM6BO15054 1643 aa27.49■■□□□ 1.99
LRCH4-208ENST00000490359 ARID3CA6NKF2 412 aa27.45■■□□□ 1.98
LRCH4-208ENST00000490359 KCNH8Q96L42 1107 aa27.44■■□□□ 1.98
LRCH4-208ENST00000490359 TEX14Q8IWB6 1497 aa27.43■■□□□ 1.98
LRCH4-208ENST00000490359 WDR7Q9Y4E6 1490 aa27.43■■□□□ 1.98
LRCH4-208ENST00000490359 EPRSP07814 1512 aaKnown RBP27.42■■□□□ 1.98
LRCH4-208ENST00000490359 GLI2P10070 1586 aa27.42■■□□□ 1.98
LRCH4-208ENST00000490359 RAPGEF6Q8TEU7 1601 aa27.41■■□□□ 1.98
LRCH4-208ENST00000490359 ATP10BO94823 1461 aa27.38■■□□□ 1.97
LRCH4-208ENST00000490359 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
LRCH4-208ENST00000490359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.38■■□□□ 1.97
LRCH4-208ENST00000490359 HNRNPUL2Q1KMD3 747 aaKnown RBP27.38■■□□□ 1.97
LRCH4-208ENST00000490359 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
LRCH4-208ENST00000490359 NUP153P49790 1475 aaKnown RBP27.33■■□□□ 1.97
LRCH4-208ENST00000490359 MAP3K4Q9Y6R4 1608 aa27.28■■□□□ 1.96
LRCH4-208ENST00000490359 CD109Q6YHK3 1445 aa27.27■■□□□ 1.96
LRCH4-208ENST00000490359 FMN1Q68DA7 1419 aa27.26■■□□□ 1.95
LRCH4-208ENST00000490359 PPRC1Q5VV67 1664 aaKnown RBP27.25■■□□□ 1.95
LRCH4-208ENST00000490359 ATP1B4Q9UN42 357 aaPredicted RBP27.2■■□□□ 1.94
LRCH4-208ENST00000490359 KDM4FA0A1W2PPD8 638 aa27.19■■□□□ 1.94
LRCH4-208ENST00000490359 CFAP43Q8NDM7 1665 aa27.17■■□□□ 1.94
LRCH4-208ENST00000490359 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
LRCH4-208ENST00000490359 CLIP1P30622 1438 aa27.16■■□□□ 1.94
LRCH4-208ENST00000490359 HECW1Q76N89 1606 aa27.14■■□□□ 1.94
LRCH4-208ENST00000490359 CDK13Q14004 1512 aaKnown RBP27.14■■□□□ 1.94
LRCH4-208ENST00000490359 MAGI3Q5TCQ9 1506 aa27.14■■□□□ 1.94
LRCH4-208ENST00000490359 PHLDB1Q86UU1 1377 aa27.12■■□□□ 1.93
LRCH4-208ENST00000490359 ABCA9Q8IUA7 1624 aa27.08■■□□□ 1.93
LRCH4-208ENST00000490359 COL17A1Q9UMD9 1497 aaPredicted RBP27.06■■□□□ 1.92
LRCH4-208ENST00000490359 CASKIN1Q8WXD9 1431 aa27.03■■□□□ 1.92
LRCH4-208ENST00000490359 PCF11O94913 1555 aaKnown RBP27.02■■□□□ 1.92
LRCH4-208ENST00000490359 CDK11AQ9UQ88 783 aaPredicted RBP27.02■■□□□ 1.92
LRCH4-208ENST00000490359 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
LRCH4-208ENST00000490359 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
LRCH4-208ENST00000490359 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
LRCH4-208ENST00000490359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.91
LRCH4-208ENST00000490359 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.91
LRCH4-208ENST00000490359 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
LRCH4-208ENST00000490359 LRRIQ1Q96JM4 1722 aa26.93■■□□□ 1.9
LRCH4-208ENST00000490359 TTC37Q6PGP7 1564 aa26.92■■□□□ 1.9
LRCH4-208ENST00000490359 TROQ12816 1431 aaPredicted RBP26.92■■□□□ 1.9
LRCH4-208ENST00000490359 NEO1Q92859 1461 aa26.91■■□□□ 1.9
LRCH4-208ENST00000490359 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
LRCH4-208ENST00000490359 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
LRCH4-208ENST00000490359 RAPGEF3O95398 923 aa26.86■■□□□ 1.89
LRCH4-208ENST00000490359 KIF14Q15058 1648 aa26.86■■□□□ 1.89
LRCH4-208ENST00000490359 FANCAO15360 1455 aa26.84■■□□□ 1.89
LRCH4-208ENST00000490359 PLCH2O75038 1416 aa26.82■■□□□ 1.88
LRCH4-208ENST00000490359 AKNAQ7Z591 1439 aa26.81■■□□□ 1.88
LRCH4-208ENST00000490359 CFAP74Q9C0B2 1584 aa26.8■■□□□ 1.88
LRCH4-208ENST00000490359 MYO5CQ9NQX4 1742 aa26.75■■□□□ 1.87
LRCH4-208ENST00000490359 DENND4BO75064 1496 aaPredicted RBP26.74■■□□□ 1.87
LRCH4-208ENST00000490359 EFCAB2Q5VUJ9 269 aa26.74■■□□□ 1.87
LRCH4-208ENST00000490359 FRMPD1Q5SYB0 1578 aa26.71■■□□□ 1.87
LRCH4-208ENST00000490359 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.86
LRCH4-208ENST00000490359 ARHGAP5Q13017 1502 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms