RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
PTK7-216ENST00000489707 KANK4Q5T7N3 995 aaPredicted RBP23.25■■□□□ 1.31
PTK7-216ENST00000489707 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
PTK7-216ENST00000489707 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
PTK7-216ENST00000489707 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
PTK7-216ENST00000489707 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.312e-6■■■■■ 31
PTK7-216ENST00000489707 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.3
PTK7-216ENST00000489707 PCF11O94913 1555 aaKnown RBP23.19■■□□□ 1.3
PTK7-216ENST00000489707 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
PTK7-216ENST00000489707 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
PTK7-216ENST00000489707 LRRC9Q6ZRR7 1453 aa23.16■■□□□ 1.3
PTK7-216ENST00000489707 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
PTK7-216ENST00000489707 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
PTK7-216ENST00000489707 CASKIN1Q8WXD9 1431 aa23.14■■□□□ 1.29
PTK7-216ENST00000489707 SAMD9Q5K651 1589 aa23.13■■□□□ 1.29
PTK7-216ENST00000489707 FHOD3Q2V2M9 1422 aa23.11■■□□□ 1.29
PTK7-216ENST00000489707 CLSPNQ9HAW4 1339 aa23.11■■□□□ 1.29
PTK7-216ENST00000489707 WDR62O43379 1518 aa23.09■■□□□ 1.29
PTK7-216ENST00000489707 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
PTK7-216ENST00000489707 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
PTK7-216ENST00000489707 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
PTK7-216ENST00000489707 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
PTK7-216ENST00000489707 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
PTK7-216ENST00000489707 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
PTK7-216ENST00000489707 ATP1B4Q9UN42 357 aaPredicted RBP22.97■■□□□ 1.27
PTK7-216ENST00000489707 IQGAP2Q13576 1575 aa22.96■■□□□ 1.27
PTK7-216ENST00000489707 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
PTK7-216ENST00000489707 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
PTK7-216ENST00000489707 PHLDB1Q86UU1 1377 aa22.93■■□□□ 1.26
PTK7-216ENST00000489707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.92■■□□□ 1.26
PTK7-216ENST00000489707 ZNF316A6NFI3 1004 aaPredicted RBP22.88■■□□□ 1.25
PTK7-216ENST00000489707 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
PTK7-216ENST00000489707 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
PTK7-216ENST00000489707 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
PTK7-216ENST00000489707 EIF4G3O43432 1585 aaKnown RBP22.86■■□□□ 1.25
PTK7-216ENST00000489707 DIEXFQ68CQ4 756 aaKnown RBP22.86■■□□□ 1.25
PTK7-216ENST00000489707 HECW1Q76N89 1606 aa22.85■■□□□ 1.25
PTK7-216ENST00000489707 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
PTK7-216ENST00000489707 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
PTK7-216ENST00000489707 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
PTK7-216ENST00000489707 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.25
PTK7-216ENST00000489707 ITGAEP38570 1179 aa22.82■■□□□ 1.24
PTK7-216ENST00000489707 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
PTK7-216ENST00000489707 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
PTK7-216ENST00000489707 RAB3GAP2Q9H2M9 1393 aa22.79■■□□□ 1.24
PTK7-216ENST00000489707 KIAA0586Q9BVV6 1533 aa22.79■■□□□ 1.24
PTK7-216ENST00000489707 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
PTK7-216ENST00000489707 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
PTK7-216ENST00000489707 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
PTK7-216ENST00000489707 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
PTK7-216ENST00000489707 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
PTK7-216ENST00000489707 KIAA0556O60303 1618 aa22.7■■□□□ 1.23
PTK7-216ENST00000489707 EPRSP07814 1512 aaKnown RBP22.68■■□□□ 1.22
PTK7-216ENST00000489707 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
PTK7-216ENST00000489707 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
PTK7-216ENST00000489707 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
PTK7-216ENST00000489707 MAPKBP1O60336 1514 aa22.63■■□□□ 1.21
PTK7-216ENST00000489707 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
PTK7-216ENST00000489707 MAGI3Q5TCQ9 1506 aa22.61■■□□□ 1.21
PTK7-216ENST00000489707 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
PTK7-216ENST00000489707 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
PTK7-216ENST00000489707 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
PTK7-216ENST00000489707 TCOF1Q13428 1488 aaKnown RBP22.57■■□□□ 1.2
PTK7-216ENST00000489707 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
PTK7-216ENST00000489707 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
PTK7-216ENST00000489707 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
PTK7-216ENST00000489707 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
PTK7-216ENST00000489707 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
PTK7-216ENST00000489707 NUP160Q12769 1436 aa22.53■■□□□ 1.2
PTK7-216ENST00000489707 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
PTK7-216ENST00000489707 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
PTK7-216ENST00000489707 NUP153P49790 1475 aaKnown RBP22.48■■□□□ 1.19
PTK7-216ENST00000489707 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
PTK7-216ENST00000489707 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
PTK7-216ENST00000489707 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
PTK7-216ENST00000489707 UACAQ9BZF9 1416 aa22.47■■□□□ 1.19
PTK7-216ENST00000489707 NAIPQ13075 1403 aa22.45■■□□□ 1.19
PTK7-216ENST00000489707 PTPRKQ15262 1439 aa22.45■■□□□ 1.19
PTK7-216ENST00000489707 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
PTK7-216ENST00000489707 FBLN2P98095 1184 aa22.44■■□□□ 1.18
PTK7-216ENST00000489707 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
PTK7-216ENST00000489707 JPH4Q96JJ6 628 aa22.39■■□□□ 1.18
PTK7-216ENST00000489707 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
PTK7-216ENST00000489707 TROQ12816 1431 aaPredicted RBP22.37■■□□□ 1.17
PTK7-216ENST00000489707 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
PTK7-216ENST00000489707 PLB1Q6P1J6 1458 aa22.32■■□□□ 1.16
PTK7-216ENST00000489707 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
PTK7-216ENST00000489707 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
PTK7-216ENST00000489707 MIER1Q8N108 512 aa22.32■■□□□ 1.16
PTK7-216ENST00000489707 MYT1Q01538 1121 aa22.31■■□□□ 1.16
PTK7-216ENST00000489707 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
PTK7-216ENST00000489707 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
PTK7-216ENST00000489707 ABCA8O94911 1581 aa22.31■■□□□ 1.16
PTK7-216ENST00000489707 DAPK1P53355 1430 aa22.29■■□□□ 1.16
PTK7-216ENST00000489707 TONSLQ96HA7 1378 aa22.28■■□□□ 1.16
PTK7-216ENST00000489707 CHD1O14646 1710 aa22.26■■□□□ 1.15
PTK7-216ENST00000489707 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
PTK7-216ENST00000489707 PRG4Q92954 1404 aaPredicted RBP22.25■■□□□ 1.15
PTK7-216ENST00000489707 KIF14Q15058 1648 aa22.24■■□□□ 1.15
PTK7-216ENST00000489707 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms