RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
SF1-218ENST00000489544 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
SF1-218ENST00000489544 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
SF1-218ENST00000489544 KIF21BO75037 1637 aa13.64□□□□□ -0.23
SF1-218ENST00000489544 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
SF1-218ENST00000489544 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
SF1-218ENST00000489544 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
SF1-218ENST00000489544 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
SF1-218ENST00000489544 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
SF1-218ENST00000489544 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
SF1-218ENST00000489544 IQGAP2Q13576 1575 aa13.61□□□□□ -0.23
SF1-218ENST00000489544 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
SF1-218ENST00000489544 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
SF1-218ENST00000489544 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
SF1-218ENST00000489544 GOLGA3Q08378 1498 aa13.6□□□□□ -0.23
SF1-218ENST00000489544 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
SF1-218ENST00000489544 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
SF1-218ENST00000489544 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
SF1-218ENST00000489544 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
SF1-218ENST00000489544 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
SF1-218ENST00000489544 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
SF1-218ENST00000489544 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
SF1-218ENST00000489544 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
SF1-218ENST00000489544 CARMIL2Q6F5E8 1435 aa13.49□□□□□ -0.25
SF1-218ENST00000489544 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
SF1-218ENST00000489544 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
SF1-218ENST00000489544 PTPRGP23470 1445 aa13.46□□□□□ -0.26
SF1-218ENST00000489544 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
SF1-218ENST00000489544 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
SF1-218ENST00000489544 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
SF1-218ENST00000489544 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
SF1-218ENST00000489544 PLB1Q6P1J6 1458 aa13.39□□□□□ -0.27
SF1-218ENST00000489544 CLIP1P30622 1438 aa13.39□□□□□ -0.27
SF1-218ENST00000489544 EFCAB5A4FU69 1503 aa13.38□□□□□ -0.27
SF1-218ENST00000489544 CEP162Q5TB80 1403 aa13.37□□□□□ -0.27
SF1-218ENST00000489544 ADCY10Q96PN6 1610 aa13.36□□□□□ -0.27
SF1-218ENST00000489544 ARID3CA6NKF2 412 aa13.36□□□□□ -0.27
SF1-218ENST00000489544 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
SF1-218ENST00000489544 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
SF1-218ENST00000489544 ABCA8O94911 1581 aa13.32□□□□□ -0.28
SF1-218ENST00000489544 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
SF1-218ENST00000489544 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
SF1-218ENST00000489544 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
SF1-218ENST00000489544 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
SF1-218ENST00000489544 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
SF1-218ENST00000489544 FMN1Q68DA7 1419 aa13.27□□□□□ -0.29
SF1-218ENST00000489544 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
SF1-218ENST00000489544 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
SF1-218ENST00000489544 ATP10BO94823 1461 aa13.25□□□□□ -0.29
SF1-218ENST00000489544 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
SF1-218ENST00000489544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
SF1-218ENST00000489544 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
SF1-218ENST00000489544 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
SF1-218ENST00000489544 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
SF1-218ENST00000489544 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
SF1-218ENST00000489544 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
SF1-218ENST00000489544 MAPKBP1O60336 1514 aa13.2□□□□□ -0.3
SF1-218ENST00000489544 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
SF1-218ENST00000489544 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
SF1-218ENST00000489544 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
SF1-218ENST00000489544 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
SF1-218ENST00000489544 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
SF1-218ENST00000489544 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
SF1-218ENST00000489544 FYCO1Q9BQS8 1478 aa13.16□□□□□ -0.3
SF1-218ENST00000489544 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
SF1-218ENST00000489544 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
SF1-218ENST00000489544 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SF1-218ENST00000489544 DIP2BQ9P265 1576 aa13.13□□□□□ -0.31
SF1-218ENST00000489544 MAGI3Q5TCQ9 1506 aa13.11□□□□□ -0.31
SF1-218ENST00000489544 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
SF1-218ENST00000489544 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
SF1-218ENST00000489544 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
SF1-218ENST00000489544 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
SF1-218ENST00000489544 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
SF1-218ENST00000489544 GLI2P10070 1586 aa13.06□□□□□ -0.32
SF1-218ENST00000489544 KIF14Q15058 1648 aa13.05□□□□□ -0.32
SF1-218ENST00000489544 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
SF1-218ENST00000489544 MTUS2Q5JR59 1369 aa13.04□□□□□ -0.32
SF1-218ENST00000489544 CD109Q6YHK3 1445 aa13.04□□□□□ -0.32
SF1-218ENST00000489544 TSPOAP1O95153 1857 aa13.04□□□□□ -0.32
SF1-218ENST00000489544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.327e-7■□□□□ 8.7
SF1-218ENST00000489544 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
SF1-218ENST00000489544 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.32
SF1-218ENST00000489544 APLP2Q06481 763 aa13.02□□□□□ -0.33
SF1-218ENST00000489544 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
SF1-218ENST00000489544 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
SF1-218ENST00000489544 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
SF1-218ENST00000489544 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
SF1-218ENST00000489544 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
SF1-218ENST00000489544 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
SF1-218ENST00000489544 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
SF1-218ENST00000489544 NCOA2Q15596 1464 aa12.95□□□□□ -0.34
SF1-218ENST00000489544 PLCH2O75038 1416 aa12.95□□□□□ -0.34
SF1-218ENST00000489544 COL17A1Q9UMD9 1497 aaPredicted RBP12.94□□□□□ -0.34
SF1-218ENST00000489544 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
SF1-218ENST00000489544 TEX14Q8IWB6 1497 aa12.93□□□□□ -0.34
SF1-218ENST00000489544 CCNB3Q8WWL7 1395 aa12.93□□□□□ -0.34
SF1-218ENST00000489544 FANCAO15360 1455 aa12.92□□□□□ -0.34
SF1-218ENST00000489544 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
SF1-218ENST00000489544 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms