RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 KIAA0586Q9BVV6 1533 aa40.67■■■■■ 4.1
PTPN18-213ENST00000489215 PRG4Q92954 1404 aaPredicted RBP40.62■■■■■ 4.09
PTPN18-213ENST00000489215 ERCC6L2Q5T890 1561 aa40.61■■■■■ 4.09
PTPN18-213ENST00000489215 RAPGEF2Q9Y4G8 1499 aa40.53■■■■■ 4.08
PTPN18-213ENST00000489215 TRHP20396 242 aaPredicted RBP40.37■■■■■ 4.05
PTPN18-213ENST00000489215 IQGAP2Q13576 1575 aa40.36■■■■■ 4.05
PTPN18-213ENST00000489215 CARMIL2Q6F5E8 1435 aa40.31■■■■■ 4.04
PTPN18-213ENST00000489215 PRXQ9BXM0 1461 aa40.27■■■■■ 4.04
PTPN18-213ENST00000489215 EEA1Q15075 1411 aa40.27■■■■■ 4.04
PTPN18-213ENST00000489215 CSRNP3Q8WYN3 585 aa40.23■■■■■ 4.03
PTPN18-213ENST00000489215 TNIKQ9UKE5 1360 aa40.15■■■■■ 4.02
PTPN18-213ENST00000489215 NPM1P06748 294 aaKnown RBP eCLIP40.15■■■■■ 4.02
PTPN18-213ENST00000489215 UGGT2Q9NYU1 1516 aa40.14■■■■■ 4.02
PTPN18-213ENST00000489215 PTPRGP23470 1445 aa40.14■■■■■ 4.02
PTPN18-213ENST00000489215 CTTNBP2Q8WZ74 1663 aa40.14■■■■■ 4.02
PTPN18-213ENST00000489215 CHIC1Q5VXU3 224 aa40.1■■■■■ 4.01
PTPN18-213ENST00000489215 DISP1Q96F81 1524 aa40.05■■■■■ 4
PTPN18-213ENST00000489215 ADCY10Q96PN6 1610 aa39.99■■■■□ 3.99
PTPN18-213ENST00000489215 GOLGA3Q08378 1498 aa39.98■■■■□ 3.99
PTPN18-213ENST00000489215 KIAA0556O60303 1618 aa39.94■■■■□ 3.99
PTPN18-213ENST00000489215 TTBK1Q5TCY1 1321 aaPredicted RBP39.94■■■■□ 3.98
PTPN18-213ENST00000489215 FAM9AQ8IZU1 332 aaPredicted RBP39.89■■■■□ 3.98
PTPN18-213ENST00000489215 MAPKBP1O60336 1514 aa39.89■■■■□ 3.98
PTPN18-213ENST00000489215 UACAQ9BZF9 1416 aa39.85■■■■□ 3.97
PTPN18-213ENST00000489215 UHRF1BP1LA0JNW5 1464 aa39.85■■■■□ 3.97
PTPN18-213ENST00000489215 ABCC2Q92887 1545 aa39.8■■■■□ 3.96
PTPN18-213ENST00000489215 KIF21BO75037 1637 aa39.78■■■■□ 3.96
PTPN18-213ENST00000489215 ABCC10Q5T3U5 1492 aa39.74■■■■□ 3.95
PTPN18-213ENST00000489215 KIF13AQ9H1H9 1805 aa39.72■■■■□ 3.95
PTPN18-213ENST00000489215 FAM69CQ0P6D2 419 aa39.68■■■■□ 3.94
PTPN18-213ENST00000489215 KDM5BQ9UGL1 1544 aa39.64■■■■□ 3.94
PTPN18-213ENST00000489215 PLB1Q6P1J6 1458 aa39.62■■■■□ 3.93
PTPN18-213ENST00000489215 DIP2BQ9P265 1576 aa39.61■■■■□ 3.93
PTPN18-213ENST00000489215 SAMD9Q5K651 1589 aa39.58■■■■□ 3.93
PTPN18-213ENST00000489215 ASXL2Q76L83 1435 aa39.56■■■■□ 3.92
PTPN18-213ENST00000489215 ABCA8O94911 1581 aa39.54■■■■□ 3.92
PTPN18-213ENST00000489215 P3H3Q8IVL6 736 aa39.53■■■■□ 3.92
PTPN18-213ENST00000489215 ZCCHC11Q5TAX3 1644 aaKnown RBP39.51■■■■□ 3.91
PTPN18-213ENST00000489215 UBTFP17480 764 aaKnown RBP39.5■■■■□ 3.91
PTPN18-213ENST00000489215 RANGAP1P46060 587 aaPredicted RBP39.43■■■■□ 3.9
PTPN18-213ENST00000489215 EFCAB5A4FU69 1503 aa39.42■■■■□ 3.9
PTPN18-213ENST00000489215 GLI2P10070 1586 aa39.41■■■■□ 3.9
PTPN18-213ENST00000489215 EHMT2Q96KQ7 1210 aa39.33■■■■□ 3.89
PTPN18-213ENST00000489215 WDR7Q9Y4E6 1490 aa39.32■■■■□ 3.89
PTPN18-213ENST00000489215 EPRSP07814 1512 aaKnown RBP39.32■■■■□ 3.89
PTPN18-213ENST00000489215 RAPGEF6Q8TEU7 1601 aa39.29■■■■□ 3.88
PTPN18-213ENST00000489215 TSPOAP1O95153 1857 aa39.29■■■■□ 3.88
PTPN18-213ENST00000489215 FHOD3Q2V2M9 1422 aa39.29■■■■□ 3.88
PTPN18-213ENST00000489215 ATP10BO94823 1461 aa39.23■■■■□ 3.87
PTPN18-213ENST00000489215 MAP3K4Q9Y6R4 1608 aa39.17■■■■□ 3.86
PTPN18-213ENST00000489215 KCNH8Q96L42 1107 aa39.14■■■■□ 3.86
PTPN18-213ENST00000489215 TEX14Q8IWB6 1497 aa39.12■■■■□ 3.85
PTPN18-213ENST00000489215 ARID3CA6NKF2 412 aa39.12■■■■□ 3.85
PTPN18-213ENST00000489215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.12■■■■□ 3.85
PTPN18-213ENST00000489215 HNRNPUL2Q1KMD3 747 aaKnown RBP39.12■■■■□ 3.85
PTPN18-213ENST00000489215 KDM6BO15054 1643 aa39.11■■■■□ 3.85
PTPN18-213ENST00000489215 FMN1Q68DA7 1419 aa39.1■■■■□ 3.85
PTPN18-213ENST00000489215 NUP153P49790 1475 aaKnown RBP39.1■■■■□ 3.85
PTPN18-213ENST00000489215 ARHGAP35Q9NRY4 1499 aa39.08■■■■□ 3.85
PTPN18-213ENST00000489215 PPRC1Q5VV67 1664 aaKnown RBP39.08■■■■□ 3.85
PTPN18-213ENST00000489215 CFAP43Q8NDM7 1665 aa39.06■■■■□ 3.84
PTPN18-213ENST00000489215 CD109Q6YHK3 1445 aa39.02■■■■□ 3.84
PTPN18-213ENST00000489215 PLEKHD1A6NEE1 506 aa38.98■■■■□ 3.83
PTPN18-213ENST00000489215 MAGI3Q5TCQ9 1506 aa38.97■■■■□ 3.83
PTPN18-213ENST00000489215 HECW1Q76N89 1606 aa38.89■■■■□ 3.82
PTPN18-213ENST00000489215 ABCA9Q8IUA7 1624 aa38.88■■■■□ 3.81
PTPN18-213ENST00000489215 ATP1B4Q9UN42 357 aaPredicted RBP38.86■■■■□ 3.81
PTPN18-213ENST00000489215 CDK11AQ9UQ88 783 aaPredicted RBP38.82■■■■□ 3.8
PTPN18-213ENST00000489215 PHLDB1Q86UU1 1377 aa38.79■■■■□ 3.8
PTPN18-213ENST00000489215 CLIP1P30622 1438 aa38.79■■■■□ 3.8
PTPN18-213ENST00000489215 CDK13Q14004 1512 aaKnown RBP38.75■■■■□ 3.79
PTPN18-213ENST00000489215 COL17A1Q9UMD9 1497 aaPredicted RBP38.73■■■■□ 3.79
PTPN18-213ENST00000489215 CASKIN1Q8WXD9 1431 aa38.7■■■■□ 3.79
PTPN18-213ENST00000489215 NEO1Q92859 1461 aa38.66■■■■□ 3.78
PTPN18-213ENST00000489215 ARAP3Q8WWN8 1544 aa38.65■■■■□ 3.78
PTPN18-213ENST00000489215 AEBP2Q6ZN18 517 aaPredicted RBP38.64■■■■□ 3.78
PTPN18-213ENST00000489215 CCDC18Q5T9S5 1454 aa38.63■■■■□ 3.77
PTPN18-213ENST00000489215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.62■■■■□ 3.77
PTPN18-213ENST00000489215 FYCO1Q9BQS8 1478 aa38.59■■■■□ 3.77
PTPN18-213ENST00000489215 PCF11O94913 1555 aaKnown RBP38.58■■■■□ 3.77
PTPN18-213ENST00000489215 TROQ12816 1431 aaPredicted RBP38.55■■■■□ 3.76
PTPN18-213ENST00000489215 LRRIQ1Q96JM4 1722 aa38.54■■■■□ 3.76
PTPN18-213ENST00000489215 CFAP74Q9C0B2 1584 aa38.53■■■■□ 3.76
PTPN18-213ENST00000489215 CEP162Q5TB80 1403 aa38.51■■■■□ 3.76
PTPN18-213ENST00000489215 TTC37Q6PGP7 1564 aa38.51■■■■□ 3.76
PTPN18-213ENST00000489215 KIF14Q15058 1648 aa38.49■■■■□ 3.75
PTPN18-213ENST00000489215 FANCAO15360 1455 aa38.47■■■■□ 3.75
PTPN18-213ENST00000489215 PLCH2O75038 1416 aa38.46■■■■□ 3.75
PTPN18-213ENST00000489215 AKNAQ7Z591 1439 aa38.44■■■■□ 3.74
PTPN18-213ENST00000489215 LOC105371045A0A1W2PR82 267 aa38.41■■■■□ 3.74
PTPN18-213ENST00000489215 MYO5CQ9NQX4 1742 aa38.4■■■■□ 3.74
PTPN18-213ENST00000489215 EFCAB2Q5VUJ9 269 aa38.37■■■■□ 3.73
PTPN18-213ENST00000489215 RAPGEF3O95398 923 aa38.36■■■■□ 3.73
PTPN18-213ENST00000489215 DENND4BO75064 1496 aaPredicted RBP38.35■■■■□ 3.73
PTPN18-213ENST00000489215 KDM4FA0A1W2PPD8 638 aa38.3■■■■□ 3.72
PTPN18-213ENST00000489215 ADGRL1O94910 1474 aa38.26■■■■□ 3.72
PTPN18-213ENST00000489215 RICTORQ6R327 1708 aa38.24■■■■□ 3.71
PTPN18-213ENST00000489215 FRMPD1Q5SYB0 1578 aa38.23■■■■□ 3.71
PTPN18-213ENST00000489215 ARHGAP5Q13017 1502 aa38.22■■■■□ 3.71
PTPN18-213ENST00000489215 SCAPERQ9BY12 1400 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms