RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
ATG3-205ENST00000488910 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
ATG3-205ENST00000488910 KIAA0586Q9BVV6 1533 aa29.77■■■□□ 2.36
ATG3-205ENST00000488910 TRHP20396 242 aaPredicted RBP29.71■■■□□ 2.35
ATG3-205ENST00000488910 RAPGEF2Q9Y4G8 1499 aa29.63■■■□□ 2.33
ATG3-205ENST00000488910 IQGAP2Q13576 1575 aa29.52■■■□□ 2.32
ATG3-205ENST00000488910 CARMIL2Q6F5E8 1435 aa29.49■■■□□ 2.31
ATG3-205ENST00000488910 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
ATG3-205ENST00000488910 NPM1P06748 294 aaKnown RBP eCLIP29.42■■■□□ 2.3
ATG3-205ENST00000488910 PTPRGP23470 1445 aa29.42■■■□□ 2.3
ATG3-205ENST00000488910 TNIKQ9UKE5 1360 aa29.4■■■□□ 2.3
ATG3-205ENST00000488910 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
ATG3-205ENST00000488910 UGGT2Q9NYU1 1516 aa29.37■■■□□ 2.29
ATG3-205ENST00000488910 EEA1Q15075 1411 aa29.34■■■□□ 2.29
ATG3-205ENST00000488910 DISP1Q96F81 1524 aa29.34■■■□□ 2.29
ATG3-205ENST00000488910 ADCY10Q96PN6 1610 aa29.34■■■□□ 2.29
ATG3-205ENST00000488910 TTBK1Q5TCY1 1321 aaPredicted RBP29.3■■■□□ 2.28
ATG3-205ENST00000488910 CTTNBP2Q8WZ74 1663 aa29.3■■■□□ 2.28
ATG3-205ENST00000488910 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
ATG3-205ENST00000488910 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
ATG3-205ENST00000488910 KIAA0556O60303 1618 aa29.22■■■□□ 2.27
ATG3-205ENST00000488910 GOLGA3Q08378 1498 aa29.21■■■□□ 2.27
ATG3-205ENST00000488910 UACAQ9BZF9 1416 aa29.2■■■□□ 2.27
ATG3-205ENST00000488910 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.26
ATG3-205ENST00000488910 ABCC10Q5T3U5 1492 aa29.17■■■□□ 2.26
ATG3-205ENST00000488910 ABCC2Q92887 1545 aa29.17■■■□□ 2.26
ATG3-205ENST00000488910 KIF13AQ9H1H9 1805 aa29.16■■■□□ 2.26
ATG3-205ENST00000488910 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
ATG3-205ENST00000488910 FAM9AQ8IZU1 332 aaPredicted RBP29.14■■■□□ 2.26
ATG3-205ENST00000488910 DIP2BQ9P265 1576 aa29.06■■■□□ 2.24
ATG3-205ENST00000488910 KDM5BQ9UGL1 1544 aa29.04■■■□□ 2.24
ATG3-205ENST00000488910 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
ATG3-205ENST00000488910 ASXL2Q76L83 1435 aa29.02■■■□□ 2.24
ATG3-205ENST00000488910 KIF21BO75037 1637 aa29■■■□□ 2.23
ATG3-205ENST00000488910 P3H3Q8IVL6 736 aa28.96■■■□□ 2.23
ATG3-205ENST00000488910 ABCA8O94911 1581 aa28.95■■■□□ 2.22
ATG3-205ENST00000488910 ZCCHC11Q5TAX3 1644 aaKnown RBP28.94■■■□□ 2.22
ATG3-205ENST00000488910 SAMD9Q5K651 1589 aa28.92■■■□□ 2.22
ATG3-205ENST00000488910 GLI2P10070 1586 aa28.89■■■□□ 2.22
ATG3-205ENST00000488910 RANGAP1P46060 587 aaPredicted RBP28.85■■■□□ 2.21
ATG3-205ENST00000488910 EPRSP07814 1512 aaKnown RBP28.84■■■□□ 2.21
ATG3-205ENST00000488910 TSPOAP1O95153 1857 aa28.84■■■□□ 2.21
ATG3-205ENST00000488910 UBTFP17480 764 aaKnown RBP28.83■■■□□ 2.21
ATG3-205ENST00000488910 WDR7Q9Y4E6 1490 aa28.81■■■□□ 2.2
ATG3-205ENST00000488910 EFCAB5A4FU69 1503 aa28.76■■■□□ 2.19
ATG3-205ENST00000488910 EHMT2Q96KQ7 1210 aa28.76■■■□□ 2.19
ATG3-205ENST00000488910 ATP10BO94823 1461 aa28.74■■■□□ 2.19
ATG3-205ENST00000488910 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
ATG3-205ENST00000488910 RAPGEF6Q8TEU7 1601 aa28.72■■■□□ 2.19
ATG3-205ENST00000488910 MAP3K4Q9Y6R4 1608 aa28.72■■■□□ 2.19
ATG3-205ENST00000488910 KCNH8Q96L42 1107 aa28.71■■■□□ 2.19
ATG3-205ENST00000488910 KDM6BO15054 1643 aa28.7■■■□□ 2.19
ATG3-205ENST00000488910 PPRC1Q5VV67 1664 aaKnown RBP28.7■■■□□ 2.18
ATG3-205ENST00000488910 ARID3CA6NKF2 412 aa28.69■■■□□ 2.18
ATG3-205ENST00000488910 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
ATG3-205ENST00000488910 NUP153P49790 1475 aaKnown RBP28.62■■■□□ 2.17
ATG3-205ENST00000488910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.62■■■□□ 2.17
ATG3-205ENST00000488910 HNRNPUL2Q1KMD3 747 aaKnown RBP28.62■■■□□ 2.17
ATG3-205ENST00000488910 CD109Q6YHK3 1445 aa28.61■■■□□ 2.17
ATG3-205ENST00000488910 CFAP43Q8NDM7 1665 aa28.59■■■□□ 2.17
ATG3-205ENST00000488910 MAGI3Q5TCQ9 1506 aa28.57■■■□□ 2.16
ATG3-205ENST00000488910 ARHGAP35Q9NRY4 1499 aa28.55■■■□□ 2.16
ATG3-205ENST00000488910 FMN1Q68DA7 1419 aa28.54■■■□□ 2.16
ATG3-205ENST00000488910 PLEKHD1A6NEE1 506 aa28.52■■■□□ 2.16
ATG3-205ENST00000488910 COL17A1Q9UMD9 1497 aaPredicted RBP28.49■■■□□ 2.15
ATG3-205ENST00000488910 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
ATG3-205ENST00000488910 ABCA9Q8IUA7 1624 aa28.47■■■□□ 2.15
ATG3-205ENST00000488910 ATP1B4Q9UN42 357 aaPredicted RBP28.41■■■□□ 2.14
ATG3-205ENST00000488910 PHLDB1Q86UU1 1377 aa28.39■■■□□ 2.14
ATG3-205ENST00000488910 HECW1Q76N89 1606 aa28.38■■■□□ 2.13
ATG3-205ENST00000488910 CDK13Q14004 1512 aaKnown RBP28.35■■■□□ 2.13
ATG3-205ENST00000488910 CDK11AQ9UQ88 783 aaPredicted RBP28.35■■■□□ 2.13
ATG3-205ENST00000488910 ARAP3Q8WWN8 1544 aa28.33■■■□□ 2.13
ATG3-205ENST00000488910 NEO1Q92859 1461 aa28.31■■■□□ 2.12
ATG3-205ENST00000488910 CLIP1P30622 1438 aa28.3■■■□□ 2.12
ATG3-205ENST00000488910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.28■■■□□ 2.123e-6■■■■□ 23
ATG3-205ENST00000488910 CASKIN1Q8WXD9 1431 aa28.26■■■□□ 2.12
ATG3-205ENST00000488910 KDM4FA0A1W2PPD8 638 aa28.25■■■□□ 2.11
ATG3-205ENST00000488910 TTC37Q6PGP7 1564 aa28.19■■■□□ 2.1
ATG3-205ENST00000488910 TROQ12816 1431 aaPredicted RBP28.18■■■□□ 2.1
ATG3-205ENST00000488910 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
ATG3-205ENST00000488910 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
ATG3-205ENST00000488910 FANCAO15360 1455 aa28.17■■■□□ 2.1
ATG3-205ENST00000488910 RAPGEF3O95398 923 aa28.17■■■□□ 2.1
ATG3-205ENST00000488910 LRRIQ1Q96JM4 1722 aa28.17■■■□□ 2.1
ATG3-205ENST00000488910 AKNAQ7Z591 1439 aa28.17■■■□□ 2.1
ATG3-205ENST00000488910 PLCH2O75038 1416 aa28.16■■■□□ 2.1
ATG3-205ENST00000488910 CFAP74Q9C0B2 1584 aa28.16■■■□□ 2.1
ATG3-205ENST00000488910 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
ATG3-205ENST00000488910 KIF14Q15058 1648 aa28.1■■■□□ 2.09
ATG3-205ENST00000488910 DENND4BO75064 1496 aaPredicted RBP28.1■■■□□ 2.09
ATG3-205ENST00000488910 ADGRL1O94910 1474 aa28.1■■■□□ 2.09
ATG3-205ENST00000488910 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
ATG3-205ENST00000488910 CEP162Q5TB80 1403 aa28.08■■■□□ 2.09
ATG3-205ENST00000488910 MYO5CQ9NQX4 1742 aa28.06■■■□□ 2.08
ATG3-205ENST00000488910 FRMPD1Q5SYB0 1578 aa28.04■■■□□ 2.08
ATG3-205ENST00000488910 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
ATG3-205ENST00000488910 RICTORQ6R327 1708 aa28.01■■■□□ 2.07
ATG3-205ENST00000488910 SCAPERQ9BY12 1400 aa28■■■□□ 2.07
ATG3-205ENST00000488910 ARHGAP5Q13017 1502 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms