RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
SPEN-205ENST00000487496 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.73
SPEN-205ENST00000487496 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
SPEN-205ENST00000487496 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
SPEN-205ENST00000487496 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
SPEN-205ENST00000487496 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
SPEN-205ENST00000487496 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
SPEN-205ENST00000487496 PTPRGP23470 1445 aa19.34■□□□□ 0.69
SPEN-205ENST00000487496 PRXQ9BXM0 1461 aa19.33■□□□□ 0.68
SPEN-205ENST00000487496 NPM1P06748 294 aaKnown RBP eCLIP19.32■□□□□ 0.68
SPEN-205ENST00000487496 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
SPEN-205ENST00000487496 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
SPEN-205ENST00000487496 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
SPEN-205ENST00000487496 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
SPEN-205ENST00000487496 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
SPEN-205ENST00000487496 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
SPEN-205ENST00000487496 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
SPEN-205ENST00000487496 EEA1Q15075 1411 aa19.22■□□□□ 0.67
SPEN-205ENST00000487496 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
SPEN-205ENST00000487496 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
SPEN-205ENST00000487496 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
SPEN-205ENST00000487496 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
SPEN-205ENST00000487496 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
SPEN-205ENST00000487496 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
SPEN-205ENST00000487496 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
SPEN-205ENST00000487496 UHRF1BP1LA0JNW5 1464 aa19.17■□□□□ 0.66
SPEN-205ENST00000487496 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
SPEN-205ENST00000487496 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
SPEN-205ENST00000487496 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
SPEN-205ENST00000487496 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
SPEN-205ENST00000487496 ASXL2Q76L83 1435 aa19.08■□□□□ 0.65
SPEN-205ENST00000487496 KDM5BQ9UGL1 1544 aa19.08■□□□□ 0.64
SPEN-205ENST00000487496 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
SPEN-205ENST00000487496 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
SPEN-205ENST00000487496 ABCA8O94911 1581 aa19.02■□□□□ 0.64
SPEN-205ENST00000487496 KIF21BO75037 1637 aa19.01■□□□□ 0.63
SPEN-205ENST00000487496 ZCCHC11Q5TAX3 1644 aaKnown RBP19■□□□□ 0.63
SPEN-205ENST00000487496 SAMD9Q5K651 1589 aa18.99■□□□□ 0.63
SPEN-205ENST00000487496 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
SPEN-205ENST00000487496 GLI2P10070 1586 aa18.98■□□□□ 0.63
SPEN-205ENST00000487496 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
SPEN-205ENST00000487496 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
SPEN-205ENST00000487496 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
SPEN-205ENST00000487496 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
SPEN-205ENST00000487496 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
SPEN-205ENST00000487496 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
SPEN-205ENST00000487496 FHOD3Q2V2M9 1422 aa18.9■□□□□ 0.62
SPEN-205ENST00000487496 ATP10BO94823 1461 aa18.89■□□□□ 0.61
SPEN-205ENST00000487496 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
SPEN-205ENST00000487496 KDM6BO15054 1643 aa18.87■□□□□ 0.61
SPEN-205ENST00000487496 PPRC1Q5VV67 1664 aaKnown RBP18.86■□□□□ 0.61
SPEN-205ENST00000487496 MAP3K4Q9Y6R4 1608 aa18.86■□□□□ 0.61
SPEN-205ENST00000487496 EFCAB5A4FU69 1503 aa18.86■□□□□ 0.61
SPEN-205ENST00000487496 RAPGEF6Q8TEU7 1601 aa18.85■□□□□ 0.61
SPEN-205ENST00000487496 NUP153P49790 1475 aaKnown RBP18.82■□□□□ 0.6
SPEN-205ENST00000487496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
SPEN-205ENST00000487496 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
SPEN-205ENST00000487496 TEX14Q8IWB6 1497 aa18.81■□□□□ 0.6
SPEN-205ENST00000487496 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
SPEN-205ENST00000487496 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.6
SPEN-205ENST00000487496 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
SPEN-205ENST00000487496 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.59
SPEN-205ENST00000487496 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
SPEN-205ENST00000487496 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
SPEN-205ENST00000487496 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
SPEN-205ENST00000487496 FMN1Q68DA7 1419 aa18.72■□□□□ 0.59
SPEN-205ENST00000487496 ABCA9Q8IUA7 1624 aa18.69■□□□□ 0.58
SPEN-205ENST00000487496 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
SPEN-205ENST00000487496 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
SPEN-205ENST00000487496 KDM4FA0A1W2PPD8 638 aa18.62■□□□□ 0.57
SPEN-205ENST00000487496 HECW1Q76N89 1606 aa18.62■□□□□ 0.57
SPEN-205ENST00000487496 ARAP3Q8WWN8 1544 aa18.61■□□□□ 0.57
SPEN-205ENST00000487496 PHLDB1Q86UU1 1377 aa18.61■□□□□ 0.57
SPEN-205ENST00000487496 NEO1Q92859 1461 aa18.58■□□□□ 0.57
SPEN-205ENST00000487496 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
SPEN-205ENST00000487496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.58■□□□□ 0.56
SPEN-205ENST00000487496 CLIP1P30622 1438 aa18.57■□□□□ 0.56
SPEN-205ENST00000487496 CASKIN1Q8WXD9 1431 aa18.56■□□□□ 0.56
SPEN-205ENST00000487496 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
SPEN-205ENST00000487496 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
SPEN-205ENST00000487496 FANCAO15360 1455 aa18.51■□□□□ 0.55
SPEN-205ENST00000487496 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
SPEN-205ENST00000487496 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
SPEN-205ENST00000487496 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
SPEN-205ENST00000487496 ADGRL1O94910 1474 aa18.5■□□□□ 0.55
SPEN-205ENST00000487496 PLCH2O75038 1416 aa18.49■□□□□ 0.55
SPEN-205ENST00000487496 LRRIQ1Q96JM4 1722 aa18.49■□□□□ 0.55
SPEN-205ENST00000487496 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
SPEN-205ENST00000487496 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
SPEN-205ENST00000487496 DENND4BO75064 1496 aaPredicted RBP18.46■□□□□ 0.54
SPEN-205ENST00000487496 KIF14Q15058 1648 aa18.45■□□□□ 0.54
SPEN-205ENST00000487496 FRMPD1Q5SYB0 1578 aa18.45■□□□□ 0.54
SPEN-205ENST00000487496 CFAP74Q9C0B2 1584 aa18.45■□□□□ 0.54
SPEN-205ENST00000487496 EFCAB2Q5VUJ9 269 aa18.43■□□□□ 0.54
SPEN-205ENST00000487496 CEP162Q5TB80 1403 aa18.42■□□□□ 0.54
SPEN-205ENST00000487496 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
SPEN-205ENST00000487496 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
SPEN-205ENST00000487496 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
SPEN-205ENST00000487496 RICTORQ6R327 1708 aa18.39■□□□□ 0.53
SPEN-205ENST00000487496 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms