RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PRG4Q92954 1404 aaPredicted RBP23.06■■□□□ 1.28
ATPAF1-205ENST00000487193 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
ATPAF1-205ENST00000487193 ABCA5Q8WWZ7 1642 aa23.03■■□□□ 1.28
ATPAF1-205ENST00000487193 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
ATPAF1-205ENST00000487193 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
ATPAF1-205ENST00000487193 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
ATPAF1-205ENST00000487193 ADCY10Q96PN6 1610 aa22.91■■□□□ 1.26
ATPAF1-205ENST00000487193 LMTK3Q96Q04 1460 aa22.9■■□□□ 1.26
ATPAF1-205ENST00000487193 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
ATPAF1-205ENST00000487193 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
ATPAF1-205ENST00000487193 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
ATPAF1-205ENST00000487193 SOCS7O14512 581 aa22.72■■□□□ 1.23
ATPAF1-205ENST00000487193 ILDR2Q71H61 639 aa22.71■■□□□ 1.23
ATPAF1-205ENST00000487193 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
ATPAF1-205ENST00000487193 TTBK1Q5TCY1 1321 aaPredicted RBP22.68■■□□□ 1.22
ATPAF1-205ENST00000487193 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
ATPAF1-205ENST00000487193 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
ATPAF1-205ENST00000487193 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
ATPAF1-205ENST00000487193 ASXL2Q76L83 1435 aa22.6■■□□□ 1.21
ATPAF1-205ENST00000487193 GLI2P10070 1586 aa22.59■■□□□ 1.21
ATPAF1-205ENST00000487193 DISP3Q9P2K9 1392 aa22.59■■□□□ 1.21
ATPAF1-205ENST00000487193 PLB1Q6P1J6 1458 aa22.55■■□□□ 1.2
ATPAF1-205ENST00000487193 PTPRGP23470 1445 aa22.54■■□□□ 1.2
ATPAF1-205ENST00000487193 ABCC2Q92887 1545 aa22.51■■□□□ 1.19
ATPAF1-205ENST00000487193 TEX14Q8IWB6 1497 aa22.48■■□□□ 1.19
ATPAF1-205ENST00000487193 CUL7Q14999 1698 aa22.48■■□□□ 1.19
ATPAF1-205ENST00000487193 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
ATPAF1-205ENST00000487193 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
ATPAF1-205ENST00000487193 EPRSP07814 1512 aaKnown RBP22.43■■□□□ 1.18
ATPAF1-205ENST00000487193 BIVM-ERCC5R4GMW8 1640 aa22.41■■□□□ 1.18
ATPAF1-205ENST00000487193 KIF21BO75037 1637 aa22.39■■□□□ 1.17
ATPAF1-205ENST00000487193 CERKQ8TCT0 537 aa22.36■■□□□ 1.17
ATPAF1-205ENST00000487193 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
ATPAF1-205ENST00000487193 PTPRMP28827 1452 aa22.34■■□□□ 1.17
ATPAF1-205ENST00000487193 CARMIL2Q6F5E8 1435 aa22.3■■□□□ 1.16
ATPAF1-205ENST00000487193 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
ATPAF1-205ENST00000487193 UACAQ9BZF9 1416 aa22.29■■□□□ 1.16
ATPAF1-205ENST00000487193 PCF11O94913 1555 aaKnown RBP22.28■■□□□ 1.16
ATPAF1-205ENST00000487193 HSPA2P54652 639 aa22.24■■□□□ 1.15
ATPAF1-205ENST00000487193 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
ATPAF1-205ENST00000487193 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
ATPAF1-205ENST00000487193 ADAMTSL3P82987 1691 aa22.22■■□□□ 1.15
ATPAF1-205ENST00000487193 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
ATPAF1-205ENST00000487193 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
ATPAF1-205ENST00000487193 SPATA31D1Q6ZQQ2 1576 aa22.19■■□□□ 1.14
ATPAF1-205ENST00000487193 IGF1RP08069 1367 aa22.16■■□□□ 1.14
ATPAF1-205ENST00000487193 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
ATPAF1-205ENST00000487193 MAGI3Q5TCQ9 1506 aa22.15■■□□□ 1.14
ATPAF1-205ENST00000487193 WDR7Q9Y4E6 1490 aa22.14■■□□□ 1.13
ATPAF1-205ENST00000487193 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
ATPAF1-205ENST00000487193 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
ATPAF1-205ENST00000487193 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
ATPAF1-205ENST00000487193 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
ATPAF1-205ENST00000487193 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
ATPAF1-205ENST00000487193 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
ATPAF1-205ENST00000487193 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
ATPAF1-205ENST00000487193 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
ATPAF1-205ENST00000487193 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
ATPAF1-205ENST00000487193 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
ATPAF1-205ENST00000487193 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
ATPAF1-205ENST00000487193 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
ATPAF1-205ENST00000487193 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
ATPAF1-205ENST00000487193 UGGT2Q9NYU1 1516 aa21.85■■□□□ 1.09
ATPAF1-205ENST00000487193 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
ATPAF1-205ENST00000487193 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
ATPAF1-205ENST00000487193 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
ATPAF1-205ENST00000487193 MLECQ14165 292 aa21.78■■□□□ 1.08
ATPAF1-205ENST00000487193 YEATS2Q9ULM3 1422 aa21.77■■□□□ 1.08
ATPAF1-205ENST00000487193 FRMPD1Q5SYB0 1578 aa21.76■■□□□ 1.07
ATPAF1-205ENST00000487193 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
ATPAF1-205ENST00000487193 ABCA8O94911 1581 aa21.74■■□□□ 1.07
ATPAF1-205ENST00000487193 POGZQ7Z3K3 1410 aa21.72■■□□□ 1.07
ATPAF1-205ENST00000487193 NEO1Q92859 1461 aa21.71■■□□□ 1.07
ATPAF1-205ENST00000487193 ARHGEF40Q8TER5 1519 aa21.7■■□□□ 1.06
ATPAF1-205ENST00000487193 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
ATPAF1-205ENST00000487193 PREX1Q8TCU6 1659 aa21.67■■□□□ 1.06
ATPAF1-205ENST00000487193 FANCAO15360 1455 aa21.67■■□□□ 1.06
ATPAF1-205ENST00000487193 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
ATPAF1-205ENST00000487193 FER1L4A9Z1Z3 1794 aa21.66■■□□□ 1.06
ATPAF1-205ENST00000487193 SIGLEC1Q9BZZ2 1709 aa21.65■■□□□ 1.06
ATPAF1-205ENST00000487193 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
ATPAF1-205ENST00000487193 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
ATPAF1-205ENST00000487193 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
ATPAF1-205ENST00000487193 ATP10BO94823 1461 aa21.61■■□□□ 1.05
ATPAF1-205ENST00000487193 DENND4BO75064 1496 aaPredicted RBP21.6■■□□□ 1.05
ATPAF1-205ENST00000487193 LTBP4Q8N2S1 1624 aa21.6■■□□□ 1.05
ATPAF1-205ENST00000487193 GOLGA3Q08378 1498 aa21.58■■□□□ 1.05
ATPAF1-205ENST00000487193 RICTORQ6R327 1708 aa21.58■■□□□ 1.05
ATPAF1-205ENST00000487193 PTPRTO14522 1441 aa21.58■■□□□ 1.05
ATPAF1-205ENST00000487193 UBAP1LF5GYI3 381 aa21.58■■□□□ 1.05
ATPAF1-205ENST00000487193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
ATPAF1-205ENST00000487193 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
ATPAF1-205ENST00000487193 IQSEC2Q5JU85 1478 aa21.55■■□□□ 1.04
ATPAF1-205ENST00000487193 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
ATPAF1-205ENST00000487193 UHRF1BP1Q6BDS2 1440 aa21.54■■□□□ 1.04
ATPAF1-205ENST00000487193 ZFYVE16Q7Z3T8 1539 aa21.53■■□□□ 1.04
ATPAF1-205ENST00000487193 P3H3Q8IVL6 736 aa21.52■■□□□ 1.04
ATPAF1-205ENST00000487193 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
ATPAF1-205ENST00000487193 CTTNBP2Q8WZ74 1663 aa21.5■■□□□ 1.03
ATPAF1-205ENST00000487193 EFCAB5A4FU69 1503 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms