RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
FDPS-212ENST00000487002 CCNB3Q8WWL7 1395 aa25.31■■□□□ 1.64
FDPS-212ENST00000487002 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.643e-9■■■■■ 29.3
FDPS-212ENST00000487002 GAPVD1Q14C86 1478 aa25.3■■□□□ 1.64
FDPS-212ENST00000487002 LRRC9Q6ZRR7 1453 aa25.3■■□□□ 1.64
FDPS-212ENST00000487002 CLSPNQ9HAW4 1339 aa25.3■■□□□ 1.64
FDPS-212ENST00000487002 TARBP1Q13395 1621 aaKnown RBP25.29■■□□□ 1.64
FDPS-212ENST00000487002 FYCO1Q9BQS8 1478 aa25.29■■□□□ 1.64
FDPS-212ENST00000487002 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
FDPS-212ENST00000487002 SAMD9Q5K651 1589 aa25.23■■□□□ 1.63
FDPS-212ENST00000487002 FHOD3Q2V2M9 1422 aa25.2■■□□□ 1.63
FDPS-212ENST00000487002 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.62
FDPS-212ENST00000487002 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
FDPS-212ENST00000487002 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
FDPS-212ENST00000487002 FMN1Q68DA7 1419 aa25.18■■□□□ 1.62
FDPS-212ENST00000487002 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
FDPS-212ENST00000487002 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
FDPS-212ENST00000487002 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
FDPS-212ENST00000487002 ZNF316A6NFI3 1004 aaPredicted RBP25.14■■□□□ 1.62
FDPS-212ENST00000487002 SNAPC4Q5SXM2 1469 aa25.12■■□□□ 1.61
FDPS-212ENST00000487002 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
FDPS-212ENST00000487002 PHLDB1Q86UU1 1377 aa25.08■■□□□ 1.61
FDPS-212ENST00000487002 P3H3Q8IVL6 736 aa25.07■■□□□ 1.6
FDPS-212ENST00000487002 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
FDPS-212ENST00000487002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.03■■□□□ 1.6
FDPS-212ENST00000487002 WDR62O43379 1518 aa25.03■■□□□ 1.6
FDPS-212ENST00000487002 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
FDPS-212ENST00000487002 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
FDPS-212ENST00000487002 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
FDPS-212ENST00000487002 IQGAP2Q13576 1575 aa24.96■■□□□ 1.59
FDPS-212ENST00000487002 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.59
FDPS-212ENST00000487002 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.58
FDPS-212ENST00000487002 ATP1B4Q9UN42 357 aaPredicted RBP24.91■■□□□ 1.58
FDPS-212ENST00000487002 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
FDPS-212ENST00000487002 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.58
FDPS-212ENST00000487002 SUPT6HQ7KZ85 1726 aaKnown RBP24.88■■□□□ 1.57
FDPS-212ENST00000487002 ITGAEP38570 1179 aa24.88■■□□□ 1.57
FDPS-212ENST00000487002 FGD6Q6ZV73 1430 aa24.88■■□□□ 1.57
FDPS-212ENST00000487002 HECW1Q76N89 1606 aa24.87■■□□□ 1.57
FDPS-212ENST00000487002 MAPKBP1O60336 1514 aa24.87■■□□□ 1.57
FDPS-212ENST00000487002 MTUS2Q5JR59 1369 aa24.87■■□□□ 1.57
FDPS-212ENST00000487002 FAM50AQ14320 339 aaKnown RBP24.85■■□□□ 1.57
FDPS-212ENST00000487002 UGGT2Q9NYU1 1516 aa24.84■■□□□ 1.57
FDPS-212ENST00000487002 NCOA2Q15596 1464 aa24.81■■□□□ 1.56
FDPS-212ENST00000487002 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
FDPS-212ENST00000487002 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
FDPS-212ENST00000487002 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
FDPS-212ENST00000487002 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
FDPS-212ENST00000487002 KIAA0586Q9BVV6 1533 aa24.74■■□□□ 1.55
FDPS-212ENST00000487002 MAGI3Q5TCQ9 1506 aa24.72■■□□□ 1.55
FDPS-212ENST00000487002 CENPBP07199 599 aaPredicted RBP24.72■■□□□ 1.55
FDPS-212ENST00000487002 ERCC6Q03468 1493 aa24.71■■□□□ 1.55
FDPS-212ENST00000487002 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
FDPS-212ENST00000487002 KIAA0556O60303 1618 aa24.71■■□□□ 1.55
FDPS-212ENST00000487002 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
FDPS-212ENST00000487002 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
FDPS-212ENST00000487002 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
FDPS-212ENST00000487002 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
FDPS-212ENST00000487002 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
FDPS-212ENST00000487002 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
FDPS-212ENST00000487002 TCOF1Q13428 1488 aaKnown RBP24.66■■□□□ 1.54
FDPS-212ENST00000487002 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
FDPS-212ENST00000487002 TIMELESSQ9UNS1 1208 aa24.62■■□□□ 1.53
FDPS-212ENST00000487002 PTPRKQ15262 1439 aa24.6■■□□□ 1.53
FDPS-212ENST00000487002 NEUROD1Q13562 356 aa24.59■■□□□ 1.53
FDPS-212ENST00000487002 MIER1Q8N108 512 aa24.59■■□□□ 1.53
FDPS-212ENST00000487002 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
FDPS-212ENST00000487002 CDK13Q14004 1512 aaKnown RBP24.58■■□□□ 1.53
FDPS-212ENST00000487002 MIA2Q96PC5 1412 aa24.58■■□□□ 1.53
FDPS-212ENST00000487002 GCC2Q8IWJ2 1684 aa24.58■■□□□ 1.52
FDPS-212ENST00000487002 UACAQ9BZF9 1416 aa24.57■■□□□ 1.52
FDPS-212ENST00000487002 RAPGEF6Q8TEU7 1601 aa24.57■■□□□ 1.52
FDPS-212ENST00000487002 NAIPQ13075 1403 aa24.56■■□□□ 1.52
FDPS-212ENST00000487002 AKNAQ7Z591 1439 aa24.56■■□□□ 1.52
FDPS-212ENST00000487002 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
FDPS-212ENST00000487002 NUP153P49790 1475 aaKnown RBP24.5■■□□□ 1.51
FDPS-212ENST00000487002 NUP160Q12769 1436 aa24.47■■□□□ 1.51
FDPS-212ENST00000487002 SIN3AQ96ST3 1273 aa24.43■■□□□ 1.5
FDPS-212ENST00000487002 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
FDPS-212ENST00000487002 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.49
FDPS-212ENST00000487002 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
FDPS-212ENST00000487002 CARMIL2Q6F5E8 1435 aa24.38■■□□□ 1.49
FDPS-212ENST00000487002 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
FDPS-212ENST00000487002 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
FDPS-212ENST00000487002 TROQ12816 1431 aaPredicted RBP24.34■■□□□ 1.49
FDPS-212ENST00000487002 PPP1R15AO75807 674 aaPredicted RBP24.34■■□□□ 1.49
FDPS-212ENST00000487002 ROCK1Q13464 1354 aa24.33■■□□□ 1.49
FDPS-212ENST00000487002 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
FDPS-212ENST00000487002 YTHDC1Q96MU7 727 aaKnown RBP24.32■■□□□ 1.48
FDPS-212ENST00000487002 DAPK1P53355 1430 aa24.31■■□□□ 1.48
FDPS-212ENST00000487002 GTF3C3Q9Y5Q9 886 aa24.29■■□□□ 1.48
FDPS-212ENST00000487002 KDM6BO15054 1643 aa24.29■■□□□ 1.48
FDPS-212ENST00000487002 PLB1Q6P1J6 1458 aa24.28■■□□□ 1.48
FDPS-212ENST00000487002 ABCA8O94911 1581 aa24.27■■□□□ 1.48
FDPS-212ENST00000487002 ARID3CA6NKF2 412 aa24.25■■□□□ 1.47
FDPS-212ENST00000487002 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
FDPS-212ENST00000487002 ABCC5O15440 1437 aa24.25■■□□□ 1.47
FDPS-212ENST00000487002 JPH4Q96JJ6 628 aa24.24■■□□□ 1.47
FDPS-212ENST00000487002 ADGBQ8N7X0 1667 aa24.24■■□□□ 1.47
FDPS-212ENST00000487002 DENND4BO75064 1496 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms