RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
TMEM39A-208ENST00000486159 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
TMEM39A-208ENST00000486159 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
TMEM39A-208ENST00000486159 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
TMEM39A-208ENST00000486159 ADRA2BP18089 450 aa16.41■□□□□ 0.22
TMEM39A-208ENST00000486159 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
TMEM39A-208ENST00000486159 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-208ENST00000486159 IGF1RP08069 1367 aa16.34■□□□□ 0.21
TMEM39A-208ENST00000486159 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
TMEM39A-208ENST00000486159 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
TMEM39A-208ENST00000486159 KIF13AQ9H1H9 1805 aa16.23■□□□□ 0.19
TMEM39A-208ENST00000486159 KIAA0586Q9BVV6 1533 aa16.21■□□□□ 0.19
TMEM39A-208ENST00000486159 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
TMEM39A-208ENST00000486159 CUL7Q14999 1698 aa16.21■□□□□ 0.18
TMEM39A-208ENST00000486159 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
TMEM39A-208ENST00000486159 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
TMEM39A-208ENST00000486159 FAM69CQ0P6D2 419 aa16.16■□□□□ 0.18
TMEM39A-208ENST00000486159 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM39A-208ENST00000486159 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
TMEM39A-208ENST00000486159 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
TMEM39A-208ENST00000486159 PTPRGP23470 1445 aa16.09■□□□□ 0.17
TMEM39A-208ENST00000486159 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
TMEM39A-208ENST00000486159 DIP2BQ9P265 1576 aa16.09■□□□□ 0.17
TMEM39A-208ENST00000486159 IQGAP2Q13576 1575 aa16.06■□□□□ 0.16
TMEM39A-208ENST00000486159 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
TMEM39A-208ENST00000486159 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
TMEM39A-208ENST00000486159 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
TMEM39A-208ENST00000486159 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
TMEM39A-208ENST00000486159 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
TMEM39A-208ENST00000486159 ABCC2Q92887 1545 aa15.98■□□□□ 0.15
TMEM39A-208ENST00000486159 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
TMEM39A-208ENST00000486159 UGGT2Q9NYU1 1516 aa15.96■□□□□ 0.15
TMEM39A-208ENST00000486159 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
TMEM39A-208ENST00000486159 KDM6BO15054 1643 aa15.94■□□□□ 0.14
TMEM39A-208ENST00000486159 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
TMEM39A-208ENST00000486159 UHRF1BP1LA0JNW5 1464 aa15.93■□□□□ 0.14
TMEM39A-208ENST00000486159 LMTK3Q96Q04 1460 aa15.93■□□□□ 0.14
TMEM39A-208ENST00000486159 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
TMEM39A-208ENST00000486159 ZCCHC11Q5TAX3 1644 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-208ENST00000486159 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
TMEM39A-208ENST00000486159 PLB1Q6P1J6 1458 aa15.89■□□□□ 0.13
TMEM39A-208ENST00000486159 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
TMEM39A-208ENST00000486159 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
TMEM39A-208ENST00000486159 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
TMEM39A-208ENST00000486159 SOCS7O14512 581 aa15.87■□□□□ 0.13
TMEM39A-208ENST00000486159 FBXO41Q8TF61 875 aa15.87■□□□□ 0.13
TMEM39A-208ENST00000486159 GLI2P10070 1586 aa15.87■□□□□ 0.13
TMEM39A-208ENST00000486159 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
TMEM39A-208ENST00000486159 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
TMEM39A-208ENST00000486159 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
TMEM39A-208ENST00000486159 ARID3CA6NKF2 412 aa15.83■□□□□ 0.12
TMEM39A-208ENST00000486159 MAP3K4Q9Y6R4 1608 aa15.81■□□□□ 0.12
TMEM39A-208ENST00000486159 ABCA8O94911 1581 aa15.8■□□□□ 0.12
TMEM39A-208ENST00000486159 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
TMEM39A-208ENST00000486159 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
TMEM39A-208ENST00000486159 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
TMEM39A-208ENST00000486159 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
TMEM39A-208ENST00000486159 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
TMEM39A-208ENST00000486159 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.11
TMEM39A-208ENST00000486159 MSH5O43196 834 aa15.76■□□□□ 0.11
TMEM39A-208ENST00000486159 ILDR2Q71H61 639 aa15.76■□□□□ 0.11
TMEM39A-208ENST00000486159 ATP10BO94823 1461 aa15.71■□□□□ 0.1
TMEM39A-208ENST00000486159 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
TMEM39A-208ENST00000486159 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
TMEM39A-208ENST00000486159 TEX14Q8IWB6 1497 aa15.69■□□□□ 0.1
TMEM39A-208ENST00000486159 SAMD9Q5K651 1589 aa15.68■□□□□ 0.1
TMEM39A-208ENST00000486159 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
TMEM39A-208ENST00000486159 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
TMEM39A-208ENST00000486159 MAGI3Q5TCQ9 1506 aa15.64■□□□□ 0.09
TMEM39A-208ENST00000486159 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
TMEM39A-208ENST00000486159 HECW2Q9P2P5 1572 aa15.63■□□□□ 0.09
TMEM39A-208ENST00000486159 RAPGEF6Q8TEU7 1601 aa15.62■□□□□ 0.09
TMEM39A-208ENST00000486159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
TMEM39A-208ENST00000486159 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
TMEM39A-208ENST00000486159 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
TMEM39A-208ENST00000486159 EEA1Q15075 1411 aa15.59■□□□□ 0.09
TMEM39A-208ENST00000486159 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
TMEM39A-208ENST00000486159 RAPGEF3O95398 923 aa15.56■□□□□ 0.08
TMEM39A-208ENST00000486159 DISP3Q9P2K9 1392 aa15.56■□□□□ 0.08
TMEM39A-208ENST00000486159 KIF21BO75037 1637 aa15.56■□□□□ 0.08
TMEM39A-208ENST00000486159 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
TMEM39A-208ENST00000486159 UBTFP17480 764 aaKnown RBP15.49■□□□□ 0.07
TMEM39A-208ENST00000486159 FRMPD1Q5SYB0 1578 aa15.48■□□□□ 0.07
TMEM39A-208ENST00000486159 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
TMEM39A-208ENST00000486159 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
TMEM39A-208ENST00000486159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.46■□□□□ 0.073e-7■□□□□ 11.1
TMEM39A-208ENST00000486159 EFCAB5A4FU69 1503 aa15.45■□□□□ 0.06
TMEM39A-208ENST00000486159 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
TMEM39A-208ENST00000486159 NEO1Q92859 1461 aa15.45■□□□□ 0.06
TMEM39A-208ENST00000486159 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
TMEM39A-208ENST00000486159 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
TMEM39A-208ENST00000486159 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
TMEM39A-208ENST00000486159 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
TMEM39A-208ENST00000486159 ADAMTSL3P82987 1691 aa15.4■□□□□ 0.06
TMEM39A-208ENST00000486159 RICTORQ6R327 1708 aa15.39■□□□□ 0.05
TMEM39A-208ENST00000486159 FANCAO15360 1455 aa15.39■□□□□ 0.05
TMEM39A-208ENST00000486159 DENND4BO75064 1496 aaPredicted RBP15.38■□□□□ 0.05
TMEM39A-208ENST00000486159 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
TMEM39A-208ENST00000486159 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
TMEM39A-208ENST00000486159 LRRIQ1Q96JM4 1722 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 252.4 ms