RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 JPH4Q96JJ6 628 aa38.99■■■■□ 3.83
ABCF3-216ENST00000485921 KIF21BO75037 1637 aa38.96■■■■□ 3.83
ABCF3-216ENST00000485921 RIMBP3CA6NJZ7 1639 aa38.96■■■■□ 3.83
ABCF3-216ENST00000485921 RIMBP3BA6NNM3 1639 aa38.96■■■■□ 3.83
ABCF3-216ENST00000485921 RIMBP3Q9UFD9 1639 aa38.96■■■■□ 3.83
ABCF3-216ENST00000485921 SHROOM2Q13796 1616 aa38.95■■■■□ 3.83
ABCF3-216ENST00000485921 IQGAP2Q13576 1575 aa38.89■■■■□ 3.82
ABCF3-216ENST00000485921 PRG4Q92954 1404 aaPredicted RBP38.86■■■■□ 3.81
ABCF3-216ENST00000485921 EHMT2Q96KQ7 1210 aa38.84■■■■□ 3.81
ABCF3-216ENST00000485921 CTTNBP2Q8WZ74 1663 aa38.83■■■■□ 3.81
ABCF3-216ENST00000485921 ERCC6L2Q5T890 1561 aa38.81■■■■□ 3.8
ABCF3-216ENST00000485921 GOLGA3Q08378 1498 aa38.79■■■■□ 3.8
ABCF3-216ENST00000485921 ARAP1Q96P48 1450 aa38.73■■■■□ 3.79
ABCF3-216ENST00000485921 UBTFP17480 764 aaKnown RBP38.73■■■■□ 3.79
ABCF3-216ENST00000485921 UGGT2Q9NYU1 1516 aa38.7■■■■□ 3.79
ABCF3-216ENST00000485921 CYB5RLQ6IPT4 315 aa38.7■■■■□ 3.79
ABCF3-216ENST00000485921 CARMIL2Q6F5E8 1435 aa38.65■■■■□ 3.78
ABCF3-216ENST00000485921 DISP1Q96F81 1524 aa38.6■■■■□ 3.77
ABCF3-216ENST00000485921 RANGAP1P46060 587 aaPredicted RBP38.52■■■■□ 3.76
ABCF3-216ENST00000485921 TNIKQ9UKE5 1360 aa38.51■■■■□ 3.76
ABCF3-216ENST00000485921 KIAA0556O60303 1618 aa38.51■■■■□ 3.76
ABCF3-216ENST00000485921 PTPRGP23470 1445 aa38.46■■■■□ 3.75
ABCF3-216ENST00000485921 TTBK1Q5TCY1 1321 aaPredicted RBP38.45■■■■□ 3.75
ABCF3-216ENST00000485921 P3H3Q8IVL6 736 aa38.4■■■■□ 3.74
ABCF3-216ENST00000485921 SAMD9Q5K651 1589 aa38.38■■■■□ 3.73
ABCF3-216ENST00000485921 LOC105371045A0A1W2PR82 267 aa38.37■■■■□ 3.73
ABCF3-216ENST00000485921 EFCAB5A4FU69 1503 aa38.3■■■■□ 3.72
ABCF3-216ENST00000485921 FHOD3Q2V2M9 1422 aa38.23■■■■□ 3.71
ABCF3-216ENST00000485921 ARHGAP35Q9NRY4 1499 aa38.2■■■■□ 3.71
ABCF3-216ENST00000485921 UACAQ9BZF9 1416 aa38.2■■■■□ 3.71
ABCF3-216ENST00000485921 ADCY10Q96PN6 1610 aa38.16■■■■□ 3.7
ABCF3-216ENST00000485921 PLB1Q6P1J6 1458 aa38.13■■■■□ 3.69
ABCF3-216ENST00000485921 CLIP1P30622 1438 aa38.12■■■■□ 3.69
ABCF3-216ENST00000485921 UHRF1BP1LA0JNW5 1464 aa38.12■■■■□ 3.69
ABCF3-216ENST00000485921 ABCC2Q92887 1545 aa38.09■■■■□ 3.69
ABCF3-216ENST00000485921 NPM1P06748 294 aaKnown RBP eCLIP38.09■■■■□ 3.69
ABCF3-216ENST00000485921 ABCA8O94911 1581 aa38.07■■■■□ 3.69
ABCF3-216ENST00000485921 CEP162Q5TB80 1403 aa38.04■■■■□ 3.68
ABCF3-216ENST00000485921 FMN1Q68DA7 1419 aa37.97■■■■□ 3.67
ABCF3-216ENST00000485921 RAPGEF6Q8TEU7 1601 aa37.94■■■■□ 3.66
ABCF3-216ENST00000485921 KDM5BQ9UGL1 1544 aa37.93■■■■□ 3.66
ABCF3-216ENST00000485921 ARID3CA6NKF2 412 aa37.86■■■■□ 3.65
ABCF3-216ENST00000485921 ZCCHC11Q5TAX3 1644 aaKnown RBP37.84■■■■□ 3.65
ABCF3-216ENST00000485921 MAPKBP1O60336 1514 aa37.84■■■■□ 3.65
ABCF3-216ENST00000485921 NUP153P49790 1475 aaKnown RBP37.84■■■■□ 3.65
ABCF3-216ENST00000485921 ATP10BO94823 1461 aa37.8■■■■□ 3.64
ABCF3-216ENST00000485921 ATP1B4Q9UN42 357 aaPredicted RBP37.8■■■■□ 3.64
ABCF3-216ENST00000485921 TRHP20396 242 aaPredicted RBP37.78■■■■□ 3.64
ABCF3-216ENST00000485921 ASXL2Q76L83 1435 aa37.76■■■■□ 3.63
ABCF3-216ENST00000485921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.73■■■■□ 3.63
ABCF3-216ENST00000485921 HNRNPUL2Q1KMD3 747 aaKnown RBP37.73■■■■□ 3.63
ABCF3-216ENST00000485921 CASKIN1Q8WXD9 1431 aa37.72■■■■□ 3.63
ABCF3-216ENST00000485921 HECW1Q76N89 1606 aa37.72■■■■□ 3.63
ABCF3-216ENST00000485921 PCF11O94913 1555 aaKnown RBP37.69■■■■□ 3.62
ABCF3-216ENST00000485921 ABCC10Q5T3U5 1492 aa37.64■■■■□ 3.62
ABCF3-216ENST00000485921 FYCO1Q9BQS8 1478 aa37.64■■■■□ 3.62
ABCF3-216ENST00000485921 EPRSP07814 1512 aaKnown RBP37.63■■■■□ 3.61
ABCF3-216ENST00000485921 WDR7Q9Y4E6 1490 aa37.62■■■■□ 3.61
ABCF3-216ENST00000485921 CDK13Q14004 1512 aaKnown RBP37.61■■■■□ 3.61
ABCF3-216ENST00000485921 FAM69CQ0P6D2 419 aa37.6■■■■□ 3.61
ABCF3-216ENST00000485921 DIP2BQ9P265 1576 aa37.56■■■■□ 3.6
ABCF3-216ENST00000485921 VPS8Q8N3P4 1428 aa37.55■■■■□ 3.6
ABCF3-216ENST00000485921 PLEKHD1A6NEE1 506 aa37.55■■■■□ 3.6
ABCF3-216ENST00000485921 KCNH8Q96L42 1107 aa37.54■■■■□ 3.6
ABCF3-216ENST00000485921 KIF13AQ9H1H9 1805 aa37.52■■■■□ 3.6
ABCF3-216ENST00000485921 LRRIQ1Q96JM4 1722 aa37.52■■■■□ 3.6
ABCF3-216ENST00000485921 CCDC18Q5T9S5 1454 aa37.52■■■■□ 3.6
ABCF3-216ENST00000485921 CDK11AQ9UQ88 783 aaPredicted RBP37.48■■■■□ 3.59
ABCF3-216ENST00000485921 GLI2P10070 1586 aa37.45■■■■□ 3.59
ABCF3-216ENST00000485921 TROQ12816 1431 aaPredicted RBP37.33■■■■□ 3.57
ABCF3-216ENST00000485921 MAP3K4Q9Y6R4 1608 aa37.28■■■■□ 3.56
ABCF3-216ENST00000485921 MAGI3Q5TCQ9 1506 aa37.27■■■■□ 3.56
ABCF3-216ENST00000485921 CD109Q6YHK3 1445 aa37.26■■■■□ 3.55
ABCF3-216ENST00000485921 ABCA9Q8IUA7 1624 aa37.25■■■■□ 3.55
ABCF3-216ENST00000485921 TSPOAP1O95153 1857 aa37.24■■■■□ 3.55
ABCF3-216ENST00000485921 CFAP43Q8NDM7 1665 aa37.24■■■■□ 3.55
ABCF3-216ENST00000485921 MTUS2Q5JR59 1369 aa37.2■■■■□ 3.55
ABCF3-216ENST00000485921 TIAM1Q13009 1591 aa37.2■■■■□ 3.55
ABCF3-216ENST00000485921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.2■■■■□ 3.55
ABCF3-216ENST00000485921 KIF14Q15058 1648 aa37.18■■■■□ 3.54
ABCF3-216ENST00000485921 APLP2Q06481 763 aa37.17■■■■□ 3.54
ABCF3-216ENST00000485921 MAP3K1Q13233 1512 aa37.15■■■■□ 3.54
ABCF3-216ENST00000485921 PPRC1Q5VV67 1664 aaKnown RBP37.15■■■■□ 3.54
ABCF3-216ENST00000485921 TTC37Q6PGP7 1564 aa37.13■■■■□ 3.53
ABCF3-216ENST00000485921 TEX14Q8IWB6 1497 aa37.11■■■■□ 3.53
ABCF3-216ENST00000485921 EHBP1L1Q8N3D4 1523 aa37.1■■■■□ 3.53
ABCF3-216ENST00000485921 KANK4Q5T7N3 995 aaPredicted RBP37.06■■■■□ 3.52
ABCF3-216ENST00000485921 LRRC9Q6ZRR7 1453 aa37.06■■■■□ 3.52
ABCF3-216ENST00000485921 PLCH2O75038 1416 aa37.02■■■■□ 3.52
ABCF3-216ENST00000485921 MYO5CQ9NQX4 1742 aa36.96■■■■□ 3.51
ABCF3-216ENST00000485921 FANCAO15360 1455 aa36.93■■■■□ 3.5
ABCF3-216ENST00000485921 SUPT6HQ7KZ85 1726 aaKnown RBP36.92■■■■□ 3.5
ABCF3-216ENST00000485921 NEO1Q92859 1461 aa36.92■■■■□ 3.5
ABCF3-216ENST00000485921 CCNB3Q8WWL7 1395 aa36.91■■■■□ 3.5
ABCF3-216ENST00000485921 ARAP3Q8WWN8 1544 aa36.91■■■■□ 3.5
ABCF3-216ENST00000485921 NCOA2Q15596 1464 aa36.91■■■■□ 3.5
ABCF3-216ENST00000485921 PHLDB1Q86UU1 1377 aa36.91■■■■□ 3.5
ABCF3-216ENST00000485921 EFCAB2Q5VUJ9 269 aa36.9■■■■□ 3.5
ABCF3-216ENST00000485921 GPATCH8Q9UKJ3 1502 aaKnown RBP36.89■■■■□ 3.5
ABCF3-216ENST00000485921 ARHGAP5Q13017 1502 aa36.88■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms