RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
SND1-212ENST00000485871 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
SND1-212ENST00000485871 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
SND1-212ENST00000485871 CHD1O14646 1710 aa18.42■□□□□ 0.54
SND1-212ENST00000485871 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
SND1-212ENST00000485871 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
SND1-212ENST00000485871 FBLN2P98095 1184 aa18.4■□□□□ 0.54
SND1-212ENST00000485871 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
SND1-212ENST00000485871 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
SND1-212ENST00000485871 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
SND1-212ENST00000485871 NUP160Q12769 1436 aa18.33■□□□□ 0.53
SND1-212ENST00000485871 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
SND1-212ENST00000485871 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
SND1-212ENST00000485871 IQGAP2Q13576 1575 aa18.27■□□□□ 0.52
SND1-212ENST00000485871 KIAA0586Q9BVV6 1533 aa18.26■□□□□ 0.51
SND1-212ENST00000485871 SAMD9Q5K651 1589 aa18.21■□□□□ 0.51
SND1-212ENST00000485871 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
SND1-212ENST00000485871 UGGT2Q9NYU1 1516 aa18.21■□□□□ 0.51
SND1-212ENST00000485871 CLIP1P30622 1438 aa18.21■□□□□ 0.51
SND1-212ENST00000485871 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
SND1-212ENST00000485871 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
SND1-212ENST00000485871 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
SND1-212ENST00000485871 DISP1Q96F81 1524 aa18.12■□□□□ 0.49
SND1-212ENST00000485871 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
SND1-212ENST00000485871 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
SND1-212ENST00000485871 JPH4Q96JJ6 628 aa18.05■□□□□ 0.48
SND1-212ENST00000485871 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
SND1-212ENST00000485871 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
SND1-212ENST00000485871 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
SND1-212ENST00000485871 PRG4Q92954 1404 aaPredicted RBP17.99■□□□□ 0.47
SND1-212ENST00000485871 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
SND1-212ENST00000485871 CARMIL2Q6F5E8 1435 aa17.98■□□□□ 0.47
SND1-212ENST00000485871 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
SND1-212ENST00000485871 FMN1Q68DA7 1419 aa17.95■□□□□ 0.46
SND1-212ENST00000485871 LRRIQ1Q96JM4 1722 aa17.93■□□□□ 0.46
SND1-212ENST00000485871 CASKIN1Q8WXD9 1431 aa17.9■□□□□ 0.46
SND1-212ENST00000485871 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
SND1-212ENST00000485871 ABCA8O94911 1581 aa17.88■□□□□ 0.45
SND1-212ENST00000485871 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
SND1-212ENST00000485871 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
SND1-212ENST00000485871 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
SND1-212ENST00000485871 MAP3K1Q13233 1512 aa17.84■□□□□ 0.45
SND1-212ENST00000485871 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
SND1-212ENST00000485871 PTPRGP23470 1445 aa17.83■□□□□ 0.45
SND1-212ENST00000485871 TIAM1Q13009 1591 aa17.83■□□□□ 0.44
SND1-212ENST00000485871 NUP153P49790 1475 aaKnown RBP17.82■□□□□ 0.44
SND1-212ENST00000485871 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.44
SND1-212ENST00000485871 ABCC2Q92887 1545 aa17.77■□□□□ 0.43
SND1-212ENST00000485871 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
SND1-212ENST00000485871 UACAQ9BZF9 1416 aa17.76■□□□□ 0.43
SND1-212ENST00000485871 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
SND1-212ENST00000485871 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
SND1-212ENST00000485871 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
SND1-212ENST00000485871 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
SND1-212ENST00000485871 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
SND1-212ENST00000485871 ATP10BO94823 1461 aa17.7■□□□□ 0.42
SND1-212ENST00000485871 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
SND1-212ENST00000485871 ILDR1Q86SU0 546 aaPredicted RBP17.7■□□□□ 0.42
SND1-212ENST00000485871 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
SND1-212ENST00000485871 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
SND1-212ENST00000485871 ZCCHC11Q5TAX3 1644 aaKnown RBP17.68■□□□□ 0.42
SND1-212ENST00000485871 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
SND1-212ENST00000485871 APLP2Q06481 763 aa17.66■□□□□ 0.42
SND1-212ENST00000485871 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
SND1-212ENST00000485871 EHBP1L1Q8N3D4 1523 aa17.66■□□□□ 0.42
SND1-212ENST00000485871 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
SND1-212ENST00000485871 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
SND1-212ENST00000485871 KDM4FA0A1W2PPD8 638 aa17.62■□□□□ 0.41
SND1-212ENST00000485871 KIF13AQ9H1H9 1805 aa17.62■□□□□ 0.41
SND1-212ENST00000485871 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
SND1-212ENST00000485871 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
SND1-212ENST00000485871 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
SND1-212ENST00000485871 MTUS2Q5JR59 1369 aa17.57■□□□□ 0.4
SND1-212ENST00000485871 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
SND1-212ENST00000485871 KIF14Q15058 1648 aa17.56■□□□□ 0.4
SND1-212ENST00000485871 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
SND1-212ENST00000485871 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
SND1-212ENST00000485871 PHLDB1Q86UU1 1377 aa17.51■□□□□ 0.39
SND1-212ENST00000485871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
SND1-212ENST00000485871 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
SND1-212ENST00000485871 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
SND1-212ENST00000485871 KDM6BO15054 1643 aa17.49■□□□□ 0.39
SND1-212ENST00000485871 CDC42BPAQ5VT25 1732 aa17.48■□□□□ 0.39
SND1-212ENST00000485871 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
SND1-212ENST00000485871 WDR7Q9Y4E6 1490 aa17.48■□□□□ 0.39
SND1-212ENST00000485871 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
SND1-212ENST00000485871 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
SND1-212ENST00000485871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.46■□□□□ 0.393e-6■■□□□ 13.8
SND1-212ENST00000485871 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
SND1-212ENST00000485871 TTC37Q6PGP7 1564 aa17.45■□□□□ 0.38
SND1-212ENST00000485871 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
SND1-212ENST00000485871 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
SND1-212ENST00000485871 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
SND1-212ENST00000485871 CDC42BPBQ9Y5S2 1711 aa17.42■□□□□ 0.38
SND1-212ENST00000485871 PREX2Q70Z35 1606 aa17.42■□□□□ 0.38
SND1-212ENST00000485871 ABCA9Q8IUA7 1624 aa17.42■□□□□ 0.38
SND1-212ENST00000485871 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
SND1-212ENST00000485871 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
SND1-212ENST00000485871 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
SND1-212ENST00000485871 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms