RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 KIAA0586Q9BVV6 1533 aa20.85■□□□□ 0.93
HDAC7-223ENST00000485796 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
HDAC7-223ENST00000485796 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
HDAC7-223ENST00000485796 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
HDAC7-223ENST00000485796 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
HDAC7-223ENST00000485796 ERCC6L2Q5T890 1561 aa20.77■□□□□ 0.92
HDAC7-223ENST00000485796 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
HDAC7-223ENST00000485796 IQGAP2Q13576 1575 aa20.75■□□□□ 0.91
HDAC7-223ENST00000485796 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
HDAC7-223ENST00000485796 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
HDAC7-223ENST00000485796 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
HDAC7-223ENST00000485796 CTTNBP2Q8WZ74 1663 aa20.72■□□□□ 0.91
HDAC7-223ENST00000485796 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
HDAC7-223ENST00000485796 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
HDAC7-223ENST00000485796 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
HDAC7-223ENST00000485796 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
HDAC7-223ENST00000485796 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
HDAC7-223ENST00000485796 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
HDAC7-223ENST00000485796 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.89
HDAC7-223ENST00000485796 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
HDAC7-223ENST00000485796 TTBK1Q5TCY1 1321 aaPredicted RBP20.62■□□□□ 0.89
HDAC7-223ENST00000485796 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
HDAC7-223ENST00000485796 CARMIL2Q6F5E8 1435 aa20.58■□□□□ 0.88
HDAC7-223ENST00000485796 KIAA0556O60303 1618 aa20.57■□□□□ 0.88
HDAC7-223ENST00000485796 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
HDAC7-223ENST00000485796 ARHGAP35Q9NRY4 1499 aa20.53■□□□□ 0.88
HDAC7-223ENST00000485796 PTPRGP23470 1445 aa20.53■□□□□ 0.88
HDAC7-223ENST00000485796 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
HDAC7-223ENST00000485796 CLIP1P30622 1438 aa20.48■□□□□ 0.87
HDAC7-223ENST00000485796 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
HDAC7-223ENST00000485796 EFCAB5A4FU69 1503 aa20.46■□□□□ 0.87
HDAC7-223ENST00000485796 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
HDAC7-223ENST00000485796 UACAQ9BZF9 1416 aa20.38■□□□□ 0.85
HDAC7-223ENST00000485796 ADCY10Q96PN6 1610 aa20.35■□□□□ 0.85
HDAC7-223ENST00000485796 ABCA8O94911 1581 aa20.35■□□□□ 0.85
HDAC7-223ENST00000485796 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
HDAC7-223ENST00000485796 UHRF1BP1LA0JNW5 1464 aa20.31■□□□□ 0.84
HDAC7-223ENST00000485796 ABCC2Q92887 1545 aa20.31■□□□□ 0.84
HDAC7-223ENST00000485796 FMN1Q68DA7 1419 aa20.29■□□□□ 0.84
HDAC7-223ENST00000485796 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
HDAC7-223ENST00000485796 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.83
HDAC7-223ENST00000485796 NUP153P49790 1475 aaKnown RBP20.26■□□□□ 0.83
HDAC7-223ENST00000485796 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
HDAC7-223ENST00000485796 ATP10BO94823 1461 aa20.23■□□□□ 0.83
HDAC7-223ENST00000485796 PCF11O94913 1555 aaKnown RBP20.22■□□□□ 0.83
HDAC7-223ENST00000485796 CASKIN1Q8WXD9 1431 aa20.22■□□□□ 0.83
HDAC7-223ENST00000485796 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
HDAC7-223ENST00000485796 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
HDAC7-223ENST00000485796 ZCCHC11Q5TAX3 1644 aaKnown RBP20.18■□□□□ 0.82
HDAC7-223ENST00000485796 CDK13Q14004 1512 aaKnown RBP20.17■□□□□ 0.82
HDAC7-223ENST00000485796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
HDAC7-223ENST00000485796 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
HDAC7-223ENST00000485796 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
HDAC7-223ENST00000485796 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.81
HDAC7-223ENST00000485796 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.81
HDAC7-223ENST00000485796 ASXL2Q76L83 1435 aa20.14■□□□□ 0.81
HDAC7-223ENST00000485796 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
HDAC7-223ENST00000485796 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
HDAC7-223ENST00000485796 KCNH8Q96L42 1107 aa20.08■□□□□ 0.81
HDAC7-223ENST00000485796 WDR7Q9Y4E6 1490 aa20.05■□□□□ 0.8
HDAC7-223ENST00000485796 MAGI3Q5TCQ9 1506 aa20.04■□□□□ 0.8
HDAC7-223ENST00000485796 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
HDAC7-223ENST00000485796 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
HDAC7-223ENST00000485796 FAM69CQ0P6D2 419 aa20.03■□□□□ 0.8
HDAC7-223ENST00000485796 CCDC18Q5T9S5 1454 aa20.03■□□□□ 0.8
HDAC7-223ENST00000485796 ABCC10Q5T3U5 1492 aa20.02■□□□□ 0.8
HDAC7-223ENST00000485796 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
HDAC7-223ENST00000485796 DIP2BQ9P265 1576 aa19.99■□□□□ 0.79
HDAC7-223ENST00000485796 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
HDAC7-223ENST00000485796 TROQ12816 1431 aaPredicted RBP19.97■□□□□ 0.79
HDAC7-223ENST00000485796 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
HDAC7-223ENST00000485796 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
HDAC7-223ENST00000485796 KIF14Q15058 1648 aa19.93■□□□□ 0.78
HDAC7-223ENST00000485796 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
HDAC7-223ENST00000485796 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
HDAC7-223ENST00000485796 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
HDAC7-223ENST00000485796 GLI2P10070 1586 aa19.91■□□□□ 0.78
HDAC7-223ENST00000485796 APLP2Q06481 763 aa19.91■□□□□ 0.78
HDAC7-223ENST00000485796 MAP3K1Q13233 1512 aa19.91■□□□□ 0.78
HDAC7-223ENST00000485796 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
HDAC7-223ENST00000485796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.77
HDAC7-223ENST00000485796 TTC37Q6PGP7 1564 aa19.87■□□□□ 0.77
HDAC7-223ENST00000485796 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
HDAC7-223ENST00000485796 ABCA9Q8IUA7 1624 aa19.85■□□□□ 0.77
HDAC7-223ENST00000485796 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
HDAC7-223ENST00000485796 MAP3K4Q9Y6R4 1608 aa19.84■□□□□ 0.77
HDAC7-223ENST00000485796 TSPOAP1O95153 1857 aa19.82■□□□□ 0.76
HDAC7-223ENST00000485796 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
HDAC7-223ENST00000485796 PPRC1Q5VV67 1664 aaKnown RBP19.81■□□□□ 0.76
HDAC7-223ENST00000485796 PLCH2O75038 1416 aa19.77■□□□□ 0.76
HDAC7-223ENST00000485796 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.76
HDAC7-223ENST00000485796 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
HDAC7-223ENST00000485796 SUPT6HQ7KZ85 1726 aaKnown RBP19.75■□□□□ 0.75
HDAC7-223ENST00000485796 PHLDB1Q86UU1 1377 aa19.74■□□□□ 0.75
HDAC7-223ENST00000485796 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
HDAC7-223ENST00000485796 ZNF644Q9H582 1327 aaPredicted RBP19.71■□□□□ 0.75
HDAC7-223ENST00000485796 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
HDAC7-223ENST00000485796 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
HDAC7-223ENST00000485796 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
HDAC7-223ENST00000485796 COL17A1Q9UMD9 1497 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms