RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
HDAC7-223ENST00000485796 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
HDAC7-223ENST00000485796 ABCC9O60706 1549 aa25.94■■□□□ 1.74
HDAC7-223ENST00000485796 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
HDAC7-223ENST00000485796 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
HDAC7-223ENST00000485796 NACADO15069 1562 aa25.01■■□□□ 1.59
HDAC7-223ENST00000485796 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
HDAC7-223ENST00000485796 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
HDAC7-223ENST00000485796 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
HDAC7-223ENST00000485796 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
HDAC7-223ENST00000485796 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
HDAC7-223ENST00000485796 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
HDAC7-223ENST00000485796 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
HDAC7-223ENST00000485796 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
HDAC7-223ENST00000485796 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
HDAC7-223ENST00000485796 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
HDAC7-223ENST00000485796 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
HDAC7-223ENST00000485796 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
HDAC7-223ENST00000485796 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
HDAC7-223ENST00000485796 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
HDAC7-223ENST00000485796 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
HDAC7-223ENST00000485796 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-223ENST00000485796 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
HDAC7-223ENST00000485796 WIZO95785 1651 aa23.13■■□□□ 1.29
HDAC7-223ENST00000485796 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
HDAC7-223ENST00000485796 SMARCA2P51531 1590 aa23.11■■□□□ 1.29
HDAC7-223ENST00000485796 PEG3Q9GZU2 1588 aa23.11■■□□□ 1.29
HDAC7-223ENST00000485796 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
HDAC7-223ENST00000485796 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
HDAC7-223ENST00000485796 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
HDAC7-223ENST00000485796 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
HDAC7-223ENST00000485796 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
HDAC7-223ENST00000485796 NESP48681 1621 aa22.57■■□□□ 1.2
HDAC7-223ENST00000485796 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
HDAC7-223ENST00000485796 CFTRP13569 1480 aa22.41■■□□□ 1.18
HDAC7-223ENST00000485796 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
HDAC7-223ENST00000485796 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
HDAC7-223ENST00000485796 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
HDAC7-223ENST00000485796 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
HDAC7-223ENST00000485796 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
HDAC7-223ENST00000485796 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
HDAC7-223ENST00000485796 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
HDAC7-223ENST00000485796 THOC2Q8NI27 1593 aaKnown RBP22.06■■□□□ 1.12
HDAC7-223ENST00000485796 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
HDAC7-223ENST00000485796 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
HDAC7-223ENST00000485796 WDR62O43379 1518 aa21.95■■□□□ 1.1
HDAC7-223ENST00000485796 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
HDAC7-223ENST00000485796 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
HDAC7-223ENST00000485796 CUX1P39880 1505 aa21.9■■□□□ 1.1
HDAC7-223ENST00000485796 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
HDAC7-223ENST00000485796 CUX2O14529 1486 aa21.85■■□□□ 1.09
HDAC7-223ENST00000485796 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
HDAC7-223ENST00000485796 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
HDAC7-223ENST00000485796 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.07
HDAC7-223ENST00000485796 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
HDAC7-223ENST00000485796 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
HDAC7-223ENST00000485796 RAD54L2Q9Y4B4 1467 aa21.73■■□□□ 1.07
HDAC7-223ENST00000485796 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
HDAC7-223ENST00000485796 SOGA1O94964 1423 aa21.69■■□□□ 1.06
HDAC7-223ENST00000485796 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
HDAC7-223ENST00000485796 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
HDAC7-223ENST00000485796 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
HDAC7-223ENST00000485796 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
HDAC7-223ENST00000485796 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
HDAC7-223ENST00000485796 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
HDAC7-223ENST00000485796 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.045e-7■■■■■ 28.8
HDAC7-223ENST00000485796 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
HDAC7-223ENST00000485796 WDR97A6NE52 1622 aa21.5■■□□□ 1.03
HDAC7-223ENST00000485796 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
HDAC7-223ENST00000485796 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
HDAC7-223ENST00000485796 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
HDAC7-223ENST00000485796 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
HDAC7-223ENST00000485796 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
HDAC7-223ENST00000485796 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
HDAC7-223ENST00000485796 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
HDAC7-223ENST00000485796 IGF1RP08069 1367 aa21.31■■□□□ 1
HDAC7-223ENST00000485796 PBRM1Q86U86 1689 aa21.29■■□□□ 1
HDAC7-223ENST00000485796 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
HDAC7-223ENST00000485796 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
HDAC7-223ENST00000485796 FBLN2P98095 1184 aa21.23■□□□□ 0.99
HDAC7-223ENST00000485796 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
HDAC7-223ENST00000485796 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
HDAC7-223ENST00000485796 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
HDAC7-223ENST00000485796 FHAD1B1AJZ9 1412 aa21.17■□□□□ 0.98
HDAC7-223ENST00000485796 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
HDAC7-223ENST00000485796 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
HDAC7-223ENST00000485796 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
HDAC7-223ENST00000485796 CHD1O14646 1710 aa21.13■□□□□ 0.97
HDAC7-223ENST00000485796 EEA1Q15075 1411 aa21.09■□□□□ 0.97
HDAC7-223ENST00000485796 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
HDAC7-223ENST00000485796 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
HDAC7-223ENST00000485796 CUL7Q14999 1698 aa21.07■□□□□ 0.96
HDAC7-223ENST00000485796 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
HDAC7-223ENST00000485796 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
HDAC7-223ENST00000485796 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
HDAC7-223ENST00000485796 CEP170Q5SW79 1584 aa20.99■□□□□ 0.95
HDAC7-223ENST00000485796 NUP160Q12769 1436 aa20.99■□□□□ 0.95
HDAC7-223ENST00000485796 CLASP1Q7Z460 1538 aa20.93■□□□□ 0.94
HDAC7-223ENST00000485796 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
HDAC7-223ENST00000485796 KIF21BO75037 1637 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms